Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|020810
Gene name
Locationscaffold_10:1556900..1558565
Strand+
Gene length (bp)1665
Transcript length (bp)1452
Coding sequence length (bp)1452
Protein length (aa) 484

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P0DN32|CUPR1_ARTBC Probable GPI-anchored cupredoxin ARB_05732-1 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05732-1 PE=1 SV=1 6 132 7.0E-12
sp|D4B3I5|A3024_ARTBC Extracellular serine-rich protein ARB_03024 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03024 PE=1 SV=1 21 139 4.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.45

Transmembrane Domains

Domain # Start End Length
1 209 231 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|020810
MLAPFLLTTFVLSVSAQSVHDVIVGVQGSFFVPPTTSAREGDLVNFIFGGDIHTLTQGTFENPCTYLKGGFDSGL
LGRGPEFDKPTQVFSLTITNASEPIWFHCAATIPYAHCTAGMVGVINPPSQDVFDSYLRSAKLVEDVPKRKPEVV
TNGIGATAAAPSTISDVFPTATPATLTDPSIPITTLPGITAPSITPEANDDDRKTIIGGAVGGAVGLIVLVSLSA
FLFFCIKKKKRSRQQYEQHMHPEKNPNLFAYNQQNPQLSHQQSFFSDSALSNSATPNTSPNYATTFNGAEHGSLS
PQAMMQSQPLLRGNTASPPTVLASKKANMPLQPLRHADSQGTVYNRQPQEYEVAALAPVAHDVSMSQQQNVTIPS
SLPSLHPLRLQPQDHQHQQEYTHHQHGSSVTTSDPGDGINLKALAREVAAVLKKDSSNSSSSQPRSMKTRNPDNG
SQGQELVSSSHNQSRDTDSLRYDAAPPKYHSDE*
Coding >AgabiH97|020810
ATGCTAGCGCCATTCCTCTTAACGACCTTCGTTCTCTCGGTTTCCGCTCAGAGCGTACATGATGTCATAGTCGGA
GTCCAGGGCAGTTTCTTCGTCCCTCCAACGACTTCAGCCCGCGAAGGCGACCTGGTCAACTTTATATTTGGGGGA
GATATACATACACTCACGCAGGGCACGTTCGAAAATCCGTGTACCTACCTCAAGGGTGGATTCGATAGCGGTCTG
CTGGGTCGAGGGCCGGAATTCGATAAGCCTACGCAAGTTTTTTCTTTGACGATCACAAATGCTAGCGAGCCCATA
TGGTTCCACTGCGCTGCGACGATACCATACGCACATTGTACTGCTGGGATGGTCGGCGTGATTAACCCTCCCTCT
CAAGATGTCTTCGACTCTTACCTCAGATCCGCGAAATTGGTGGAAGACGTGCCCAAGCGCAAGCCAGAAGTCGTT
ACCAATGGTATTGGGGCAACGGCAGCAGCACCTTCTACAATTTCAGACGTGTTCCCGACCGCTACTCCGGCCACG
CTTACTGATCCCAGCATACCAATCACGACTTTACCGGGAATCACTGCTCCATCTATTACGCCCGAAGCTAATGAC
GACGACCGCAAGACGATTATCGGCGGTGCAGTTGGCGGAGCTGTTGGTCTCATTGTTCTGGTCTCCCTCAGCGCT
TTCCTCTTCTTCTGCATCAAGAAGAAGAAGAGAAGTCGACAACAATACGAACAACACATGCACCCGGAAAAGAAT
CCGAATCTTTTCGCTTATAATCAACAAAATCCCCAACTTTCTCACCAACAAAGTTTCTTCTCTGATTCAGCACTT
TCTAATTCGGCGACTCCCAATACGAGTCCAAACTATGCCACCACCTTTAATGGTGCTGAACATGGTAGTCTATCG
CCGCAGGCCATGATGCAAAGCCAACCGCTTCTACGAGGAAATACGGCCAGTCCGCCTACAGTCTTGGCGTCGAAA
AAGGCTAATATGCCGCTTCAACCGCTGAGGCATGCGGATAGTCAAGGAACTGTGTATAACCGACAGCCACAAGAA
TACGAGGTGGCGGCCTTGGCTCCTGTCGCCCATGACGTCTCAATGTCGCAGCAACAGAATGTAACAATTCCTTCA
TCTCTTCCATCTCTCCACCCTCTTCGATTGCAGCCGCAAGATCATCAGCATCAACAAGAATATACACATCATCAG
CACGGCTCATCTGTCACCACTTCTGATCCTGGAGATGGTATCAATCTCAAAGCACTCGCCAGAGAAGTGGCTGCA
GTATTGAAAAAAGATTCTTCAAACTCCTCGTCTAGTCAACCACGTAGCATGAAGACTCGAAATCCAGATAATGGC
AGTCAAGGTCAAGAATTGGTTTCGAGTAGTCATAATCAATCGAGAGATACAGATTCTCTTCGATATGATGCAGCG
CCGCCTAAATATCATTCTGATGAATGA
Transcript >AgabiH97|020810
ATGCTAGCGCCATTCCTCTTAACGACCTTCGTTCTCTCGGTTTCCGCTCAGAGCGTACATGATGTCATAGTCGGA
GTCCAGGGCAGTTTCTTCGTCCCTCCAACGACTTCAGCCCGCGAAGGCGACCTGGTCAACTTTATATTTGGGGGA
GATATACATACACTCACGCAGGGCACGTTCGAAAATCCGTGTACCTACCTCAAGGGTGGATTCGATAGCGGTCTG
CTGGGTCGAGGGCCGGAATTCGATAAGCCTACGCAAGTTTTTTCTTTGACGATCACAAATGCTAGCGAGCCCATA
TGGTTCCACTGCGCTGCGACGATACCATACGCACATTGTACTGCTGGGATGGTCGGCGTGATTAACCCTCCCTCT
CAAGATGTCTTCGACTCTTACCTCAGATCCGCGAAATTGGTGGAAGACGTGCCCAAGCGCAAGCCAGAAGTCGTT
ACCAATGGTATTGGGGCAACGGCAGCAGCACCTTCTACAATTTCAGACGTGTTCCCGACCGCTACTCCGGCCACG
CTTACTGATCCCAGCATACCAATCACGACTTTACCGGGAATCACTGCTCCATCTATTACGCCCGAAGCTAATGAC
GACGACCGCAAGACGATTATCGGCGGTGCAGTTGGCGGAGCTGTTGGTCTCATTGTTCTGGTCTCCCTCAGCGCT
TTCCTCTTCTTCTGCATCAAGAAGAAGAAGAGAAGTCGACAACAATACGAACAACACATGCACCCGGAAAAGAAT
CCGAATCTTTTCGCTTATAATCAACAAAATCCCCAACTTTCTCACCAACAAAGTTTCTTCTCTGATTCAGCACTT
TCTAATTCGGCGACTCCCAATACGAGTCCAAACTATGCCACCACCTTTAATGGTGCTGAACATGGTAGTCTATCG
CCGCAGGCCATGATGCAAAGCCAACCGCTTCTACGAGGAAATACGGCCAGTCCGCCTACAGTCTTGGCGTCGAAA
AAGGCTAATATGCCGCTTCAACCGCTGAGGCATGCGGATAGTCAAGGAACTGTGTATAACCGACAGCCACAAGAA
TACGAGGTGGCGGCCTTGGCTCCTGTCGCCCATGACGTCTCAATGTCGCAGCAACAGAATGTAACAATTCCTTCA
TCTCTTCCATCTCTCCACCCTCTTCGATTGCAGCCGCAAGATCATCAGCATCAACAAGAATATACACATCATCAG
CACGGCTCATCTGTCACCACTTCTGATCCTGGAGATGGTATCAATCTCAAAGCACTCGCCAGAGAAGTGGCTGCA
GTATTGAAAAAAGATTCTTCAAACTCCTCGTCTAGTCAACCACGTAGCATGAAGACTCGAAATCCAGATAATGGC
AGTCAAGGTCAAGAATTGGTTTCGAGTAGTCATAATCAATCGAGAGATACAGATTCTCTTCGATATGATGCAGCG
CCGCCTAAATATCATTCTGATGAATGA
Gene >AgabiH97|020810
ATGCTAGCGCCATTCCTCTTAACGACCTTCGTTCTCTCGGTTTCCGCTCAGAGCGTACATGATGTCATAGTCGGA
GTCCAGGGCAGTTTCTTCGTCCCTCCAACGACTTCAGCCCGCGAAGGCGACCTGGTCAACTTTATATTTGGGGGA
GAGTACGTATTCCTGTTCTACTATCCCCGCTCGTTTTCTTACGTGCCTTGAAGTATACATACACTCACGCAGGGC
ACGTTCGAAAATCCGTGTACCTACCTCAAGGGTGGATTCGATAGCGGTCTGCTGGGTCGAGGGCCGGAATTCGAT
AAGCCTACGCAAGTTTTTTCTTTGACGATCACAAATGCTAGCGAGCGTAAGTGTATCTTCTCAAGGAGAAATTGT
AACACCAATTGCTAAAATGACTATTCAGCCATATGGTTCCACTGCGCTGCGACGATACCATACGCACATTGTACT
GCTGGGATGGTCGGGTAAACGACAGCTCTCCCTCATATACCAGCCATTCTCACGCGGATTTTTTTCTCAGCGTGA
TTAACCCTCCCTCTCAAGATGTCTTCGACTCTTACCTCAGATCCGCGAAATTGGTGGAAGACGTGCCCAAGGCAA
GTGACACGCTCTTATATACGTACACGGTCTCACAGGATGATACAGCGCAAGCCAGAAGTCGTTACCAATGGTATT
GGGGCAACGGCAGCAGCACCTTCTACAATTTCAGACGTGTTCCCGACCGCTACTCCGGCCACGCTTACTGATCCC
AGCATACCAATCACGACTTTACCGGGAATCACTGCTCCATCTATTACGCCCGAAGCTAATGACGACGACCGCAAG
ACGATTATCGGCGGTGCAGTTGGCGGAGCTGTTGGTCTCATTGTTCTGGTCTCCCTCAGCGCTTTCCTCTTCTTC
TGCATCAAGAAGAAGAAGAGAAGTCGACAACAATACGAACAACACATGCACCCGGAAAAGAATCCGAATCTTTTC
GCTTATAATCAACAAAATCCCCAACTTTCTCACCAACAAAGTTTCTTCTCTGATTCAGCACTTTCTAATTCGGCG
ACTCCCAATACGAGTCCAAACTATGCCACCACCTTTAATGGTGCTGAACATGGTAGTCTATCGCCGCAGGCCATG
ATGCAAAGCCAACCGCTTCTACGAGGAAATACGGCCAGTCCGCCTACAGTCTTGGCGTCGAAAAAGGCTAATATG
CCGCTTCAACCGCTGAGGCATGCGGATAGTCAAGGAACTGTGTATAACCGACAGCCACAAGAATACGAGGTGGCG
GCCTTGGCTCCTGTCGCCCATGACGTCTCAATGTCGCAGCAACAGAATGTAACAATTCCTTCATCTCTTCCATCT
CTCCACCCTCTTCGATTGCAGCCGCAAGATCATCAGCATCAACAAGAATATACACATCATCAGCACGGCTCATCT
GTCACCACTTCTGATCCTGGAGATGGTATCAATCTCAAAGCACTCGCCAGAGAAGTGGCTGCAGTATTGAAAAAA
GATTCTTCAAACTCCTCGTCTAGTCAACCACGTAGCATGAAGACTCGAAATCCAGATAATGGCAGTCAAGGTCAA
GAATTGGTTTCGAGTAGTCATAATCAATCGAGAGATACAGATTCTCTTCGATATGATGCAGCGCCGCCTAAATAT
CATTCTGATGAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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