Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|020290
Gene name
Locationscaffold_10:1399563..1400369
Strand+
Gene length (bp)806
Transcript length (bp)501
Coding sequence length (bp)501
Protein length (aa) 167

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

Domain # Start End Length
1 2 24 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|020290
MLFLNFFSSALTTIVFGAILVQAQDLAAGRYRIFNGDRSARSFPIEQPEFDAPITMSNQFADVFEQWNVTPDGNG
AYLIQNVGGSARAFADPTLNTEVHAILEKQTSWLIENKGSNAPGEVGSFAIKIPFQDLLWTITPGNGGDDTITLE
GSDGSAVQRFVFQPVA*
Coding >AgabiH97|020290
ATGTTGTTCCTTAACTTCTTCTCCTCTGCTCTTACTACTATTGTTTTCGGTGCCATACTCGTTCAAGCGCAGGAT
CTTGCGGCTGGTAGATATCGTATTTTCAACGGCGATAGATCAGCACGTAGTTTTCCAATTGAACAACCCGAGTTC
GATGCCCCTATAACCATGTCGAACCAATTTGCTGATGTTTTCGAGCAATGGAATGTTACTCCTGATGGAAATGGT
GCTTATTTGATCCAAAATGTTGGCGGTAGTGCCAGAGCGTTCGCAGATCCAACGCTTAACACCGAAGTACACGCT
ATTTTGGAGAAACAGACTTCGTGGTTAATCGAGAATAAAGGAAGTAACGCTCCGGGTGAAGTTGGTTCATTCGCT
ATTAAGATTCCTTTCCAGGATCTGCTTTGGACGATTACTCCGGGGAATGGCGGGGATGATACTATCACGCTAGAA
GGATCCGATGGAAGTGCTGTGCAAAGATTCGTTTTTCAACCGGTTGCTTGA
Transcript >AgabiH97|020290
ATGTTGTTCCTTAACTTCTTCTCCTCTGCTCTTACTACTATTGTTTTCGGTGCCATACTCGTTCAAGCGCAGGAT
CTTGCGGCTGGTAGATATCGTATTTTCAACGGCGATAGATCAGCACGTAGTTTTCCAATTGAACAACCCGAGTTC
GATGCCCCTATAACCATGTCGAACCAATTTGCTGATGTTTTCGAGCAATGGAATGTTACTCCTGATGGAAATGGT
GCTTATTTGATCCAAAATGTTGGCGGTAGTGCCAGAGCGTTCGCAGATCCAACGCTTAACACCGAAGTACACGCT
ATTTTGGAGAAACAGACTTCGTGGTTAATCGAGAATAAAGGAAGTAACGCTCCGGGTGAAGTTGGTTCATTCGCT
ATTAAGATTCCTTTCCAGGATCTGCTTTGGACGATTACTCCGGGGAATGGCGGGGATGATACTATCACGCTAGAA
GGATCCGATGGAAGTGCTGTGCAAAGATTCGTTTTTCAACCGGTTGCTTGA
Gene >AgabiH97|020290
ATGTTGTTCCTTAACTTCTTCTCCTCTGCTCTTACTACTATTGTTTTCGGTGCCATACTCGTTCAAGCGCAGGAT
GTACGTTCTACCCAGCTTATCTCTTTCAAATCCACTAATAGCCTGCACATGATATATAGCTTGCGGCTGGTAGAT
ATCGTATTTTCAACGGCGATAGATCAGCACGTAGTTTTCCAATTGAACAACCCGAGTTCGATGCCCCTATAACCA
TGTCGAACCAATTTGCTGATGTTTTCGAGCAAGTAAGTTTGCTAAGCATTCAACGATTAATTGATTAATCAAATT
GATGGTATTTGAATTTCTTTTAGTGGAATGTTACTCCTGATGGAAATGGTGCTTATTTGATCCAAAATGTTGGCG
GTAGTGCCAGAGCGTTCGCAGATCCAACGCTTGTAAGTTCAATAGACTTTGCGCTACAAGTGAATTTTTGACTGA
TGCCGCTATAGAACACCGAAGTACACGCTATTTTGGAGAAACAGACTTCGTGGTTAATCGAGAATAAAGGAAGTA
ACGCTCCGGGTGAAGTTGGTTCATTCGCTGTTAGTCTTTTTTCCTCGCAATACCATTCGTATTCTTGACTGAACC
CCGTGTTTTTTTAGATTAAGATTCCTTTCCAGGATCTGCTTTGGACGATTACTCCGGGGAATGGCGGGGATGATA
CTGTAAGTGGATCTAGTTTCTCGTTAACTTGAACTTTTAAGTGATGCGCGCTTTCTGCACGATTCTAGATCACGC
TAGAAGGATCCGATGGAAGTGCTGTGCAAAGATTCGTTTTTCAACCGGTTGCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail