Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|020260
Gene name
Locationscaffold_10:1386916..1388984
Strand+
Gene length (bp)2068
Transcript length (bp)933
Coding sequence length (bp)933
Protein length (aa) 311

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20152 DUF6534 Family of unknown function (DUF6534) 5.3E-17 159 246

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cell membrane Signal peptide|Transmembrane domain 0.0736 0.0945 0.1904 0.6835 0.062 0.0009 0.1126 0.3667 0.5034 0.0036

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 5 27 22
2 47 66 19
3 86 108 22
4 115 137 22
5 152 174 22
6 195 217 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Orthologs

Orthofinder run ID1
Orthogroup19
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|004100
Agaricus bisporus var bisporus H39 AgabiH39|406100
Agaricus bisporus var bisporus H39 AgabiH39|386300
Agaricus bisporus var bisporus H39 AgabiH39|386200
Agaricus bisporus var bisporus H39 AgabiH39|102060
Agaricus bisporus var bisporus H39 AgabiH39|095970
Agaricus bisporus var bisporus H39 AgabiH39|103490
Agaricus bisporus var bisporus H39 AgabiH39|095720
Agaricus bisporus var bisporus H39 AgabiH39|022930
Agaricus bisporus var bisporus H39 AgabiH39|020260
Agaricus bisporus var bisporus H39 AgabiH39|020250
Agaricus bisporus var bisporus H39 AgabiH39|095960
Agaricus bisporus var bisporus H97 AgabiH97|096260
Agaricus bisporus var bisporus H97 AgabiH97|103490
Agaricus bisporus var bisporus H97 AgabiH97|103480
Agaricus bisporus var bisporus H97 AgabiH97|103470
Agaricus bisporus var bisporus H97 AgabiH97|102060
Agaricus bisporus var bisporus H97 AgabiH97|096250
Agaricus bisporus var bisporus H97 AgabiH97|020260 (this protein)
Agaricus bisporus var bisporus H97 AgabiH97|095960
Agaricus bisporus var bisporus H97 AgabiH97|095720
Agaricus bisporus var bisporus H97 AgabiH97|022930
Agaricus bisporus var bisporus H97 AgabiH97|020250
Agaricus bisporus var bisporus H97 AgabiH97|004100
Agaricus bisporus var bisporus H97 AgabiH97|095970
Rhodonia placenta FPRL280 RhoplFPRL280|25_45
Rhodonia placenta FPRL280 RhoplFPRL280|168_9
Rhodonia placenta FPRL280 RhoplFPRL280|227_13
Rhodonia placenta FPRL280 RhoplFPRL280|435_5

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|020260
MPPSISLLFGPILIGALINAILYGVLVVQSLIYFQTYKKDNGWLKCLVFYLFIVETINSGLIIGLVYEPLILKYG
QSEAMSFFPLQPLMTVAASTPVQLFIAWRIIVISEKRHIPLIIGLFSLISTGGAIWLAYTVVDIREFSRKAELHW
PALTWLIAAMIADVIIAASLGYSLAKRRTGIAQTDDTINRIIRMTIQTGLVTAIFTILEVICFLLIPNSTLNFVW
DLALSKLYTNALLSTLNARTSFGMSTNVLFTEKSINRDVSTMHGVQVTLSGRSRSLDISPSGNGCGRTVENIEIG
VMSVKEVREI*
Coding >AgabiH97|020260
ATGCCACCATCAATATCACTCCTATTTGGACCGATTCTTATCGGCGCTCTTATCAATGCAATTCTATATGGCGTC
CTGGTAGTCCAGAGTCTTATATACTTTCAGACTTATAAAAAGGACAACGGGTGGCTGAAATGTCTTGTTTTCTAT
CTGTTCATAGTAGAAACAATAAACTCGGGATTGATTATAGGATTGGTATATGAACCGCTAATTCTCAAGTACGGT
CAATCAGAAGCAATGTCATTTTTTCCTCTTCAACCACTCATGACGGTTGCGGCTTCAACACCAGTACAACTGTTT
ATCGCGTGGAGAATCATCGTTATAAGTGAAAAGCGGCACATCCCCCTCATAATTGGATTATTTTCATTGATATCG
ACAGGTGGAGCTATATGGCTAGCGTATACCGTTGTTGATATCCGGGAATTCTCAAGAAAAGCTGAATTACATTGG
CCCGCCTTGACTTGGTTAATCGCTGCCATGATCGCGGATGTGATAATCGCCGCTTCCTTAGGCTATAGCCTCGCG
AAAAGGAGAACTGGAATCGCTCAAACTGATGATACAATTAACAGAATTATCAGAATGACCATCCAAACCGGCCTC
GTAACCGCTATATTCACGATTTTGGAAGTGATATGTTTCCTTCTCATACCTAATTCAACTCTGAATTTTGTCTGG
GACCTTGCTTTATCTAAATTGTATACGAACGCGTTACTATCGACTTTGAATGCGCGTACGAGCTTTGGGATGTCG
ACGAATGTGTTGTTTACGGAGAAGTCGATCAATAGAGATGTCAGTACCATGCATGGAGTCCAAGTTACATTGTCA
GGGAGATCTAGATCATTAGATATATCACCTTCAGGGAATGGATGCGGGAGAACGGTCGAGAATATCGAGATCGGA
GTTATGTCTGTAAAGGAGGTCAGAGAAATATGA
Transcript >AgabiH97|020260
ATGCCACCATCAATATCACTCCTATTTGGACCGATTCTTATCGGCGCTCTTATCAATGCAATTCTATATGGCGTC
CTGGTAGTCCAGAGTCTTATATACTTTCAGACTTATAAAAAGGACAACGGGTGGCTGAAATGTCTTGTTTTCTAT
CTGTTCATAGTAGAAACAATAAACTCGGGATTGATTATAGGATTGGTATATGAACCGCTAATTCTCAAGTACGGT
CAATCAGAAGCAATGTCATTTTTTCCTCTTCAACCACTCATGACGGTTGCGGCTTCAACACCAGTACAACTGTTT
ATCGCGTGGAGAATCATCGTTATAAGTGAAAAGCGGCACATCCCCCTCATAATTGGATTATTTTCATTGATATCG
ACAGGTGGAGCTATATGGCTAGCGTATACCGTTGTTGATATCCGGGAATTCTCAAGAAAAGCTGAATTACATTGG
CCCGCCTTGACTTGGTTAATCGCTGCCATGATCGCGGATGTGATAATCGCCGCTTCCTTAGGCTATAGCCTCGCG
AAAAGGAGAACTGGAATCGCTCAAACTGATGATACAATTAACAGAATTATCAGAATGACCATCCAAACCGGCCTC
GTAACCGCTATATTCACGATTTTGGAAGTGATATGTTTCCTTCTCATACCTAATTCAACTCTGAATTTTGTCTGG
GACCTTGCTTTATCTAAATTGTATACGAACGCGTTACTATCGACTTTGAATGCGCGTACGAGCTTTGGGATGTCG
ACGAATGTGTTGTTTACGGAGAAGTCGATCAATAGAGATGTCAGTACCATGCATGGAGTCCAAGTTACATTGTCA
GGGAGATCTAGATCATTAGATATATCACCTTCAGGGAATGGATGCGGGAGAACGGTCGAGAATATCGAGATCGGA
GTTATGTCTGTAAAGGAGGTCAGAGAAATATGA
Gene >AgabiH97|020260
ATGCCACCATCAATATCACTCCTGTGAGTCCTTCTCTACTACAAGTACCGACAGCATCAAAATAGTTTGACACAA
GTCTTTACGAAGATTTGGACCGATTCTTATCGGTGGGTCGATTCTTTTGAACCACTCATGTCGGAGACTTAGAAC
AAGGGGTATGACAAGGCGCTCTTATCAATGCAATTCTATATGGCGTATGTTCTATCTGGATTTTTCTTCGGGGGA
CTTGAGCGATAATTCATGGTGAAAACTAGGTCCTGGTAGTCCAGGTGCGCAGTCGAGTAGTACGGAATAGCTGTC
CTCGAATAACAGACCTCCCTGTTCTGCTGTCGATCGCATGACCCTTGCTTGATATTAGAGTCTTATATACTTTCA
GACTTATAAAAAGTGGGCTAGTTATTGTTAGATTCTCTGAGTGCCAGAAAACTGACCATTGTAACAGGGACAACG
GGTGGCTGAAATGTCTTGTAAGTCTTACGGCGTCAACGAGCTATCGTTTGCCTAAGTCGTTTGCAAAGGTTTTCT
ATCTGTTCATAGTAGAAACAATAAACTCGGGATTGATTATAGGATTGGTATATGAACCGCTAATTCTCAAGTACG
GTGAGTCAACTCTCATTCTCATATAAAAACATCGTCATTGTAACCTCGTTCCTTTTTCTTAGGTCAATCAGAAGC
AATGTCATTTTTTCCTCTTCGTAAGTCGATTATTTCTTTATCACGGGCTGGGTAGTGATACAAGTAGTTTTACCT
TCAGGTATTGTCCACTCTTTGTCCATGTTCGCACTACTTAATTCCAAATGGTGCGCCTTATAGAACCACTCATGA
CGGTGCGTGCTTTATTAAGCTCAGATCTAAATTCCTTGTTCGCCTTCTGAAACGCACCCGGTTTTGATGTGTTCC
GGTCCTTTCGGTGAAAAAAAAGGAAAAGAATTCTGGGGCTCAACCTCAGCATTAGGCACCGGGCGCTAATGCTTA
ACATTTTGTTTGTATAGGTTGCGGCTTCAACACCAGTACAACTGTTTATCGCGTGGAGAATCATCGTTATAAGTG
AAAAGCGGCACATCCCCCTCATAATTGGATTATTTTCATTGATATCGACAGGTTCGTGGTTCCACCCGTATTGAT
GACAATCAGTGACTTTCTTTTTCGTCCTAGGTGGAGCTATATGGCTAGCGTATACCGTTGTTGATATCCGGGAAT
TCTCAAGAAAAGCTGAATTACATTGGCCCGCCTTGACTTGGTTAATCGCTGCCATGATCGCGGATGTGATAATCG
CCGCTTCCTTAGGCTATAGCCTCGTCAGCTCTTTTCATCAAGTTTTCCAACTTGCTCTTTTCGCTGACTGTGTGA
TGCTTGAACATTTGGTTCTAGGCGAAAAGGAGAACTGGAATCGCTCAAACTGATGATACAATTAACAGAGTTTGT
GGAATCATCCATTTGTTAGTTCGGGTATTCGTCGACTAATGGTGGCGTGGTATAGATTATCAGAATGACCATCCA
AACCGGCCTCGTAACCGCTATATTCACGATTTTGGAAGTGATATGTTTCCTTCTCATACCTGTGAGTACCTTTCA
AGTATGGTGGAAAGTCTTCCGATTCATCTATTCTATTATAGAATTCAACTCTGTAAGTTCCGGTTGATACACTCG
AAAGAAGCATCCCTGATTTCGTGGACCAAGGAATTTTGTCTGGGACCTTGCTTTATCTAAATTGTATACGAACGC
GTTACTATCGACTTTGAATGCGCGTACGAGCTTTGGGATGTCGACGAATGTGTTGTTTACGGAGAAGTCGATCAA
TAGAGATGTCAGTACCATGCATGGAGTGAGACTTTCATTTTCTGTCATAAAATGAATTCTCAGCTTACAGGATAT
TATTAGGTCCAAGTTACATTGTCAGGGAGATCTAGAGTAAGTTTCAGAATTCTTAAAAGATTTGATGATGTCTAA
GGTTATGTGCTCACGTTTGTAGTCATTAGATATATCACCTTCAGGGAATGGATGCGGGAGAACGGTCGAGAATAT
CGAGATCGGAGTTATGTCTGTAAAGGAGGTCAGAGAAATATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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