Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|019810
Gene name
Location	scaffold_10:1279024..1280850
Strand	-
Gene length (bp)	1826
Transcript length (bp)	1557
Coding sequence length (bp)	1557
Protein length (aa)	519

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF03807	F420_oxidored	NADP oxidoreductase coenzyme F420-dependent	4.9E-06	22	103

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O60078\|TYR1_SCHPO	Probable prephenate dehydrogenase [NADP(+)] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tyr1 PE=2 SV=1	23	501	2.0E-149
sp\|P20049\|TYR1_YEAST	Prephenate dehydrogenase [NADP(+)] OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TYR1 PE=1 SV=2	22	510	3.0E-141
sp\|Q58029\|Y612_METJA	Probable arogenate/prephenate dehydrogenase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0612 PE=3 SV=1	22	271	1.0E-13

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 37	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|019810 MELPINVDPNVTPNAPEHDQPTIGLIGMGAMGRMYAKLFSQAGWKKIYVCDLPEKYERLKEEYANTPGVFPQPNG YAVSRSADYIVYSVEAEYIDRVVAQYGPSTKVNAIVAGQTSVKAPERAAFERHLPADVHILSCHSLHGPTVSPVG QPLVLIQHRSSKDALTLVENILRSFRSRFVYLSYEEHDSVTANTQAVTHAAFLSMGTAWASAESYPWEQGLYVGG IETAKVNLALRIYSNAWHVYAGLAILNPSARTQIHQYAKSASELFKLMLSGGSGSLEDRTKFKERVEWARKTVFS EWGTHNEIFEEDDNHMPTNSSPLSSRPPSPTRRKPILLSASILDKFSMGMPQTSTQNVVPASPTDPSPLQSSLAP PPNHRPNSHLSLIAMVDCWAHLGINPYTHLQLAATPIFRLFLGVAEHLFQSSTLLKSAIHSAIYDHWHRSDDLEF VVAARGWSQCVSFGSFEVYRKRFEETRGFFESRFEEAGKLGSEMIKAVMESEVRREKEEEERMRKMAV*
Coding	>AgabiH97\|019810 ATGGAACTACCCATCAACGTAGATCCCAACGTCACCCCAAATGCCCCTGAACACGATCAGCCAACTATTGGGCTC ATCGGTATGGGCGCCATGGGTCGTATGTACGCTAAATTATTCAGCCAGGCCGGTTGGAAGAAGATTTACGTGTGT GATCTACCAGAAAAGTATGAAAGGCTAAAAGAGGAGTATGCTAATACACCTGGAGTCTTTCCTCAGCCAAATGGA TACGCCGTATCTAGGTCGGCAGACTATATCGTATATTCAGTCGAAGCGGAATATATCGATCGCGTGGTTGCACAG TATGGTCCTTCTACCAAAGTGAATGCGATTGTCGCTGGTCAAACTTCTGTCAAAGCCCCTGAAAGAGCTGCATTC GAAAGACATCTTCCTGCAGATGTACATATTCTTTCTTGTCACTCGCTACATGGACCTACAGTCAGTCCAGTCGGT CAACCTCTTGTTCTTATTCAACATAGATCTAGCAAGGATGCTCTAACACTAGTCGAAAACATCCTCCGTTCATTC CGCTCTCGCTTCGTTTATCTCTCCTACGAAGAGCACGACTCAGTCACTGCCAATACCCAAGCAGTAACACACGCA GCCTTTCTCAGTATGGGCACAGCATGGGCATCAGCCGAATCCTATCCATGGGAACAGGGTCTTTACGTCGGTGGA ATAGAAACAGCAAAAGTCAACCTCGCACTTCGGATTTACTCTAATGCGTGGCATGTTTATGCTGGCCTCGCAATT CTAAACCCAAGTGCTCGCACTCAAATCCATCAATACGCTAAAAGCGCTTCAGAGTTATTTAAACTCATGTTAAGT GGTGGTAGCGGTTCTTTAGAAGATCGCACCAAATTCAAAGAACGCGTTGAATGGGCTCGGAAAACCGTGTTTTCC GAATGGGGAACGCATAACGAGATATTCGAAGAGGACGATAACCATATGCCGACAAATTCTAGTCCACTTTCGTCG AGACCACCGTCTCCTACAAGACGAAAACCAATCTTACTCTCCGCTTCAATTTTAGATAAGTTTAGTATGGGAATG CCACAAACTTCAACACAAAACGTCGTACCAGCATCTCCTACCGATCCTTCACCTCTTCAAAGCTCTCTCGCACCA CCACCCAATCATCGTCCCAATTCTCATCTCTCTCTCATCGCCATGGTTGATTGTTGGGCCCACCTCGGTATAAAC CCTTACACCCACCTTCAACTCGCCGCAACACCCATATTCCGACTATTCCTCGGTGTAGCCGAACATCTATTTCAA TCATCGACTTTATTGAAAAGTGCTATCCATTCGGCGATTTACGATCATTGGCATAGGTCTGATGATTTGGAATTT GTTGTTGCTGCGAGAGGTTGGAGTCAGTGTGTTAGTTTTGGAAGTTTTGAGGTTTATAGGAAGAGGTTTGAGGAG ACGAGAGGGTTTTTTGAGTCGAGGTTTGAGGAGGCTGGGAAATTGGGGAGTGAGATGATTAAAGCGGTGATGGAG AGTGAGGTTAGGAGGGAGAAGGAGGAGGAGGAGAGGATGCGTAAGATGGCGGTATGA
Transcript	>AgabiH97\|019810 ATGGAACTACCCATCAACGTAGATCCCAACGTCACCCCAAATGCCCCTGAACACGATCAGCCAACTATTGGGCTC ATCGGTATGGGCGCCATGGGTCGTATGTACGCTAAATTATTCAGCCAGGCCGGTTGGAAGAAGATTTACGTGTGT GATCTACCAGAAAAGTATGAAAGGCTAAAAGAGGAGTATGCTAATACACCTGGAGTCTTTCCTCAGCCAAATGGA TACGCCGTATCTAGGTCGGCAGACTATATCGTATATTCAGTCGAAGCGGAATATATCGATCGCGTGGTTGCACAG TATGGTCCTTCTACCAAAGTGAATGCGATTGTCGCTGGTCAAACTTCTGTCAAAGCCCCTGAAAGAGCTGCATTC GAAAGACATCTTCCTGCAGATGTACATATTCTTTCTTGTCACTCGCTACATGGACCTACAGTCAGTCCAGTCGGT CAACCTCTTGTTCTTATTCAACATAGATCTAGCAAGGATGCTCTAACACTAGTCGAAAACATCCTCCGTTCATTC CGCTCTCGCTTCGTTTATCTCTCCTACGAAGAGCACGACTCAGTCACTGCCAATACCCAAGCAGTAACACACGCA GCCTTTCTCAGTATGGGCACAGCATGGGCATCAGCCGAATCCTATCCATGGGAACAGGGTCTTTACGTCGGTGGA ATAGAAACAGCAAAAGTCAACCTCGCACTTCGGATTTACTCTAATGCGTGGCATGTTTATGCTGGCCTCGCAATT CTAAACCCAAGTGCTCGCACTCAAATCCATCAATACGCTAAAAGCGCTTCAGAGTTATTTAAACTCATGTTAAGT GGTGGTAGCGGTTCTTTAGAAGATCGCACCAAATTCAAAGAACGCGTTGAATGGGCTCGGAAAACCGTGTTTTCC GAATGGGGAACGCATAACGAGATATTCGAAGAGGACGATAACCATATGCCGACAAATTCTAGTCCACTTTCGTCG AGACCACCGTCTCCTACAAGACGAAAACCAATCTTACTCTCCGCTTCAATTTTAGATAAGTTTAGTATGGGAATG CCACAAACTTCAACACAAAACGTCGTACCAGCATCTCCTACCGATCCTTCACCTCTTCAAAGCTCTCTCGCACCA CCACCCAATCATCGTCCCAATTCTCATCTCTCTCTCATCGCCATGGTTGATTGTTGGGCCCACCTCGGTATAAAC CCTTACACCCACCTTCAACTCGCCGCAACACCCATATTCCGACTATTCCTCGGTGTAGCCGAACATCTATTTCAA TCATCGACTTTATTGAAAAGTGCTATCCATTCGGCGATTTACGATCATTGGCATAGGTCTGATGATTTGGAATTT GTTGTTGCTGCGAGAGGTTGGAGTCAGTGTGTTAGTTTTGGAAGTTTTGAGGTTTATAGGAAGAGGTTTGAGGAG ACGAGAGGGTTTTTTGAGTCGAGGTTTGAGGAGGCTGGGAAATTGGGGAGTGAGATGATTAAAGCGGTGATGGAG AGTGAGGTTAGGAGGGAGAAGGAGGAGGAGGAGAGGATGCGTAAGATGGCGGTATGA
Gene	>AgabiH97\|019810 ATGGAACTACCCATCAACGTAGATCCCAACGTCACCCCAAATGCCCCTGAACACGATCAGCCAACTATTGGGCTC ATCGGTATGGGCGCCATGGGTCGTATGTACGCTAAATTATTCAGCCAGGCCGGTTGGAAGAAGTGCGTCATTCTC GTTGTATTCCTGTTGTGATCACCGACGCTGTTTTAGGATTTACGTGTGTGATCTACCAGAAAAGTATGAAAGGCT AAAAGAGGAGTATGCTAGTGCGCCTTTTATTGCGATCAGGGTCCGCGAGTTCAGGGTCTAACCACTCGTTCGCAG ATACACCTGGAGTCTTTCCTCAGCCAAATGGATACGCCGTATCTAGGTCGGCAGACTATATCGTATATTCAGTCG AAGCGGAATATATCGATCGCGTGGTTGCACAGTATGGTCCTTGTGAGTCAATTACTCACTCAATCCCTCAAATTA AAACTCTCCAATAGCTACCAAAGTGAATGCGATTGTCGCTGGTCAAACTTCTGTCAAAGCCCCTGAAAGAGCTGC ATTCGAAAGACATCTTCCTGCAGATGTACATATTCTTTCTTGTCACTCGCTACATGGACCTACAGTCAGTCCAGT CGGTCAACCTCTTGTGAGTTTCCTTCCCTTTTTCCTTCTGCGGGAAGTCCCTGATAGATAGACACTAGGTTCTTA TTCAACATAGATCTAGCAAGGATGCTCTAACACTAGTCGAAAACATCCTCCGTTCATTCCGCTCTCGCTTCGTTT ATCTCTCCTACGAAGAGCACGACTCAGTCACTGCCAATACCCAAGCAGTAACACACGCAGCCTTTCTCAGGTGTG AACGCCAAACTTTCTCTCACAAAGTTTAACACCGTACTGACCTGTAGTCAAACAGTATGGGCACAGCATGGGCAT CAGCCGAATCCTATCCATGGGAACAGGGTCTTTACGTCGGTGGAATAGAAACAGCAAAAGTCAACCTCGCACTTC GGATTTACTCTAATGCGTGGCATGTTTATGCTGGCCTCGCAATTCTAAACCCAAGTGCTCGCACTCAAATCCATC AATACGCTAAAAGCGCTTCAGAGTTATTTAAACTCATGTTAAGTGGTGGTAGCGGTTCTTTAGAAGATCGCACCA AATTCAAAGAACGCGTTGAATGGGCTCGGAAAACCGTGTTTTCCGAATGGGGAACGCATAACGAGATATTCGAAG AGGACGATAACCATATGCCGACAAATTCTAGTCCACTTTCGTCGAGACCACCGTCTCCTACAAGACGAAAACCAA TCTTACTCTCCGCTTCAATTTTAGATAAGTTTAGTATGGGAATGCCACAAACTTCAACACAAAACGTCGTACCAG CATCTCCTACCGATCCTTCACCTCTTCAAAGCTCTCTCGCACCACCACCCAATCATCGTCCCAATTCTCATCTCT CTCTCATCGCCATGGTTGATTGTTGGGCCCACCTCGGTATAAACCCTTACACCCACCTTCAACTCGCCGCAACAC CCATATTCCGACTATTCCTCGGTGTAGCCGAACATCTATTTCAATCATCGACTTTATTGAAAAGTGCTATCCATT CGGCGATTTACGATCATTGGCATAGGTCTGATGATTTGGAATTTGTTGTTGCTGCGAGAGGTTGGAGTCAGTGTG TTAGTTTTGGAAGTTTTGAGGTTTATAGGAAGAGGTTTGAGGAGACGAGAGGGTTTTTTGAGTCGAGGTTTGAGG AGGCTGGGAAATTGGGGAGTGAGATGATTAAAGCGGTGATGGAGAGTGAGGTTAGGAGGGAGAAGGAGGAGGAGG AGAGGATGCGTAAGATGGCGGTATGA

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