Protein ID | AgabiH97|019760 |
Gene name | |
Location | scaffold_10:1268580..1270441 |
Strand | - |
Gene length (bp) | 1861 |
Transcript length (bp) | 1569 |
Coding sequence length (bp) | 1569 |
Protein length (aa) | 523 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 24 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Casing | Casing mycelium | 24.56 | 13.14 | 35.99 |
Initials | Initials knots | 29.32 | 16.90 | 41.73 |
Pileal_Stipeal_center | Stage I stipe center | 10.22 | 5.16 | 15.28 |
Pileal_Stipeal_shell | Stage I stipe shell | 9.60 | 4.76 | 14.44 |
DIF_stipe_center | Stage II stipe center | 8.82 | 4.37 | 13.26 |
DIF_stipe_shell | Stage II stipe shell | 9.81 | 4.93 | 14.69 |
DIF_stipe_skin | Stage II stipe skin | 12.75 | 6.63 | 18.87 |
DIF_cap_skin | Stage II cap skin | 9.63 | 4.82 | 14.43 |
DIF_cap_tissue | Stage II cap tissue | 8.86 | 4.40 | 13.33 |
DIF_gill_tissue | Stage II gill tissue | 8.64 | 4.23 | 13.05 |
YFB_stipe_center | Young fruiting body stipe center | 12.27 | 6.16 | 18.39 |
YFB_stipe_shell | Young fruiting body stipe shell | 12.87 | 6.60 | 19.14 |
YFB_stipe_skin | Young fruiting body stipe skin | 11.43 | 5.65 | 17.21 |
YFB_cap_skin | Young fruiting body cap skin | 8.17 | 4.00 | 12.35 |
YFB_cap_tissue | Young fruiting body cap tissue | 5.97 | 2.79 | 9.16 |
YFB_gill_tissue | Young fruiting body gill tissue | 9.50 | 4.77 | 14.24 |
YFB_veil | Young fruiting body veil | 8.69 | 4.25 | 13.13 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Casing | DIF_gill_tissue | 0.000613 | yes |
Casing | YFB_stipe_center | 0.022111 | yes |
Casing | YFB_stipe_shell | 0.041603 | yes |
Casing | YFB_stipe_skin | 0.015242 | yes |
Casing | YFB_cap_skin | 0.000613 | yes |
Casing | YFB_cap_tissue | 0.000613 | yes |
Casing | YFB_gill_tissue | 0.002084 | yes |
Casing | YFB_veil | 0.000613 | yes |
Casing | Initials | 0.693586 | no |
Casing | Pileal_Stipeal_center | 0.001625 | yes |
Casing | Pileal_Stipeal_shell | 0.003765 | yes |
Casing | DIF_stipe_center | 0.000613 | yes |
Casing | DIF_stipe_shell | 0.001625 | yes |
Casing | DIF_stipe_skin | 0.036683 | yes |
Casing | DIF_cap_skin | 0.001140 | yes |
Casing | DIF_cap_tissue | 0.000613 | yes |
DIF_gill_tissue | YFB_stipe_center | 0.378882 | no |
DIF_gill_tissue | YFB_stipe_shell | 0.303559 | no |
DIF_gill_tissue | YFB_stipe_skin | 0.528583 | no |
DIF_gill_tissue | YFB_cap_skin | 0.933372 | no |
DIF_gill_tissue | YFB_cap_tissue | 0.366549 | no |
DIF_gill_tissue | YFB_gill_tissue | 0.878157 | no |
DIF_gill_tissue | YFB_veil | 0.992209 | no |
YFB_stipe_center | YFB_stipe_shell | 0.941956 | no |
YFB_stipe_center | YFB_stipe_skin | 0.910605 | no |
YFB_stipe_center | YFB_cap_skin | 0.283365 | no |
YFB_stipe_center | YFB_cap_tissue | 0.026461 | yes |
YFB_stipe_center | YFB_gill_tissue | 0.567159 | no |
YFB_stipe_center | YFB_veil | 0.384811 | no |
YFB_stipe_shell | YFB_stipe_skin | 0.837806 | no |
YFB_stipe_shell | YFB_cap_skin | 0.214129 | no |
YFB_stipe_shell | YFB_cap_tissue | 0.017783 | yes |
YFB_stipe_shell | YFB_gill_tissue | 0.480199 | no |
YFB_stipe_shell | YFB_veil | 0.310583 | no |
YFB_stipe_skin | YFB_cap_skin | 0.420996 | no |
YFB_stipe_skin | YFB_cap_tissue | 0.058732 | no |
YFB_stipe_skin | YFB_gill_tissue | 0.719140 | no |
YFB_stipe_skin | YFB_veil | 0.533691 | no |
YFB_cap_skin | YFB_cap_tissue | 0.468197 | no |
YFB_cap_skin | YFB_gill_tissue | 0.782614 | no |
YFB_cap_skin | YFB_veil | 0.921640 | no |
YFB_cap_tissue | YFB_gill_tissue | 0.214014 | no |
YFB_cap_tissue | YFB_veil | 0.348877 | no |
YFB_gill_tissue | YFB_veil | 0.881993 | no |
Initials | DIF_gill_tissue | 0.000613 | yes |
Initials | YFB_stipe_center | 0.003365 | yes |
Initials | YFB_stipe_shell | 0.007092 | yes |
Initials | YFB_stipe_skin | 0.001625 | yes |
Initials | YFB_cap_skin | 0.000613 | yes |
Initials | YFB_cap_tissue | 0.000613 | yes |
Initials | YFB_gill_tissue | 0.000613 | yes |
Initials | YFB_veil | 0.000613 | yes |
Initials | Pileal_Stipeal_center | 0.000613 | yes |
Initials | Pileal_Stipeal_shell | 0.000613 | yes |
Initials | DIF_stipe_center | 0.000613 | yes |
Initials | DIF_stipe_shell | 0.000613 | yes |
Initials | DIF_stipe_skin | 0.006387 | yes |
Initials | DIF_cap_skin | 0.000613 | yes |
Initials | DIF_cap_tissue | 0.000613 | yes |
Pileal_Stipeal_center | DIF_gill_tissue | 0.741436 | no |
Pileal_Stipeal_center | YFB_stipe_center | 0.709908 | no |
Pileal_Stipeal_center | YFB_stipe_shell | 0.616585 | no |
Pileal_Stipeal_center | YFB_stipe_skin | 0.842745 | no |
Pileal_Stipeal_center | YFB_cap_skin | 0.632448 | no |
Pileal_Stipeal_center | YFB_cap_tissue | 0.126752 | no |
Pileal_Stipeal_center | YFB_gill_tissue | 0.906582 | no |
Pileal_Stipeal_center | YFB_veil | 0.748179 | no |
Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.918570 | no |
Pileal_Stipeal_center | DIF_stipe_center | 0.781318 | no |
Pileal_Stipeal_center | DIF_stipe_shell | 0.949363 | no |
Pileal_Stipeal_center | DIF_stipe_skin | 0.635121 | no |
Pileal_Stipeal_center | DIF_cap_skin | 0.923650 | no |
Pileal_Stipeal_center | DIF_cap_tissue | 0.790927 | no |
Pileal_Stipeal_shell | DIF_gill_tissue | 0.862221 | no |
Pileal_Stipeal_shell | YFB_stipe_center | 0.596542 | no |
Pileal_Stipeal_shell | YFB_stipe_shell | 0.502819 | no |
Pileal_Stipeal_shell | YFB_stipe_skin | 0.739769 | no |
Pileal_Stipeal_shell | YFB_cap_skin | 0.766104 | no |
Pileal_Stipeal_shell | YFB_cap_tissue | 0.211921 | no |
Pileal_Stipeal_shell | YFB_gill_tissue | 0.987595 | no |
Pileal_Stipeal_shell | YFB_veil | 0.867574 | no |
Pileal_Stipeal_shell | DIF_stipe_center | 0.893147 | no |
Pileal_Stipeal_shell | DIF_stipe_shell | 0.973480 | no |
Pileal_Stipeal_shell | DIF_stipe_skin | 0.520309 | no |
Pileal_Stipeal_shell | DIF_cap_skin | 0.996132 | no |
Pileal_Stipeal_shell | DIF_cap_tissue | 0.900654 | no |
DIF_stipe_center | DIF_gill_tissue | 0.977392 | no |
DIF_stipe_center | YFB_stipe_center | 0.422809 | no |
DIF_stipe_center | YFB_stipe_shell | 0.342562 | no |
DIF_stipe_center | YFB_stipe_skin | 0.570884 | no |
DIF_stipe_center | YFB_cap_skin | 0.907196 | no |
DIF_stipe_center | YFB_cap_tissue | 0.335605 | no |
DIF_stipe_center | YFB_gill_tissue | 0.909219 | no |
DIF_stipe_center | YFB_veil | 0.982660 | no |
DIF_stipe_center | DIF_stipe_shell | 0.860254 | no |
DIF_stipe_center | DIF_stipe_skin | 0.358057 | no |
DIF_stipe_center | DIF_cap_skin | 0.890007 | no |
DIF_stipe_center | DIF_cap_tissue | 0.992912 | no |
DIF_stipe_shell | DIF_gill_tissue | 0.826734 | no |
DIF_stipe_shell | YFB_stipe_center | 0.640735 | no |
DIF_stipe_shell | YFB_stipe_shell | 0.547396 | no |
DIF_stipe_shell | YFB_stipe_skin | 0.782077 | no |
DIF_stipe_shell | YFB_cap_skin | 0.727960 | no |
DIF_stipe_shell | YFB_cap_tissue | 0.188034 | no |
DIF_stipe_shell | YFB_gill_tissue | 0.962344 | no |
DIF_stipe_shell | YFB_veil | 0.831933 | no |
DIF_stipe_shell | DIF_stipe_skin | 0.564465 | no |
DIF_stipe_shell | DIF_cap_skin | 0.978058 | no |
DIF_stipe_shell | DIF_cap_tissue | 0.868329 | no |
DIF_stipe_skin | DIF_gill_tissue | 0.309178 | no |
DIF_stipe_skin | YFB_stipe_center | 0.955087 | no |
DIF_stipe_skin | YFB_stipe_shell | 0.989276 | no |
DIF_stipe_skin | YFB_stipe_skin | 0.851978 | no |
DIF_stipe_skin | YFB_cap_skin | 0.225264 | no |
DIF_stipe_skin | YFB_cap_tissue | 0.019442 | yes |
DIF_stipe_skin | YFB_gill_tissue | 0.491869 | no |
DIF_stipe_skin | YFB_veil | 0.320910 | no |
DIF_stipe_skin | DIF_cap_skin | 0.523497 | no |
DIF_stipe_skin | DIF_cap_tissue | 0.360361 | no |
DIF_cap_skin | DIF_gill_tissue | 0.861537 | no |
DIF_cap_skin | YFB_stipe_center | 0.603755 | no |
DIF_cap_skin | YFB_stipe_shell | 0.509225 | no |
DIF_cap_skin | YFB_stipe_skin | 0.749798 | no |
DIF_cap_skin | YFB_cap_skin | 0.764692 | no |
DIF_cap_skin | YFB_cap_tissue | 0.208106 | no |
DIF_cap_skin | YFB_gill_tissue | 0.984649 | no |
DIF_cap_skin | YFB_veil | 0.865842 | no |
DIF_cap_skin | DIF_cap_tissue | 0.898684 | no |
DIF_cap_tissue | DIF_gill_tissue | 0.971675 | no |
DIF_cap_tissue | YFB_stipe_center | 0.425607 | no |
DIF_cap_tissue | YFB_stipe_shell | 0.348314 | no |
DIF_cap_tissue | YFB_stipe_skin | 0.576675 | no |
DIF_cap_tissue | YFB_cap_skin | 0.898761 | no |
DIF_cap_tissue | YFB_cap_tissue | 0.326052 | no |
DIF_cap_tissue | YFB_gill_tissue | 0.915888 | no |
DIF_cap_tissue | YFB_veil | 0.976896 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >AgabiH97|019760 MNLLRLPIEIIVDILLCLDVSDAYAVQALNHFFRNLYKTSLILQYALECKIAHVRDNPNCHLPIPERLQILRERE SAWSSLTPTSKRITALPAGPGKCISNTRRLKIQPNHCTLFEYSKVSQLAFRKYFQISSIREIKEDSFHPIPLGIG NLMHVGFCVDEHDLIACLTKNSLPDSQIELRLVLLQYSTGKAHPLAMEPNILVFRNDVSNNCYNFMANNIEIFGE NLVLTIRLLKAGVEVECMYVYNWKTGQAKCEPIPVSNCDVVVLDQNLVIVPDPKEWSLYIFYIPSSSSGGPVKLI QQLDLPPCHVGRSSFISCRSLPNPTEDGRFPKYISSSIPFMDKPDTALICITLLATASLLVHRDSIMRLLPPSEE WSAVTKHLILDWDSWGPPVTAIQRRVTSTYGQRSLYVSEFGLRCCDFNKHHVRRSTEVKLPDLYEPFMINDVNLI TTRLPCVEIVSPSKEFSGKYLADGAVVGMKKRKNTIEVSYFGGWMVKSYVLGFNAYSCDHYIPPVSRINGFR* |
Coding | >AgabiH97|019760 ATGAATCTCCTCCGACTCCCTATCGAAATCATTGTTGATATTTTGTTATGCCTAGATGTTTCTGATGCATACGCT GTTCAAGCACTCAATCACTTTTTCCGCAACTTGTACAAAACATCTCTCATTCTTCAGTATGCTCTCGAGTGCAAA ATTGCTCACGTTCGCGACAATCCGAATTGCCATCTACCTATTCCCGAACGGCTACAAATTCTGAGAGAGAGGGAA TCAGCATGGAGCTCGCTAACGCCCACGTCCAAAAGGATAACAGCGCTTCCGGCTGGCCCGGGAAAATGCATATCA AATACAAGGCGTCTTAAAATACAGCCAAACCATTGCACGTTATTCGAGTACTCCAAAGTCAGTCAGTTGGCATTC CGGAAATATTTCCAAATCTCGTCGATCCGGGAAATCAAAGAAGATTCTTTCCATCCAATTCCGCTTGGGATTGGA AATCTCATGCACGTCGGCTTTTGCGTCGATGAGCATGATCTCATTGCCTGCCTCACGAAGAACAGCCTGCCTGAC TCTCAAATCGAGCTCAGACTCGTCCTGCTCCAGTACTCTACAGGAAAAGCTCATCCCCTTGCAATGGAGCCCAAC ATTCTCGTGTTCCGCAATGACGTTTCGAACAACTGTTACAACTTTATGGCCAATAATATAGAAATATTCGGTGAA AACCTCGTCCTCACGATTCGTTTGCTAAAAGCTGGCGTAGAGGTCGAGTGCATGTATGTTTATAATTGGAAAACG GGCCAAGCCAAATGTGAACCTATACCAGTGTCGAACTGTGATGTCGTCGTTCTCGATCAGAATCTAGTGATCGTC CCTGACCCCAAGGAATGGTCACTGTACATATTTTACATCCCCTCCTCGTCTTCTGGTGGACCTGTTAAGTTAATA CAGCAACTTGATCTCCCCCCATGTCACGTCGGCCGAAGTAGTTTCATATCATGTCGAAGCCTACCAAATCCAACC GAAGATGGTCGATTCCCTAAATATATATCATCTTCCATTCCCTTCATGGACAAGCCAGATACTGCTCTTATCTGC ATCACCCTACTCGCTACAGCTTCATTACTCGTTCACAGGGACTCAATCATGAGACTCCTTCCCCCTTCAGAAGAG TGGTCGGCCGTCACAAAGCATTTAATTCTTGATTGGGACTCTTGGGGGCCTCCTGTCACGGCAATTCAACGACGG GTCACTAGTACATATGGACAGCGTTCCCTATATGTCTCGGAGTTCGGCCTTCGCTGTTGTGACTTTAACAAACAC CACGTTCGCCGTTCCACTGAAGTCAAGCTGCCCGATCTCTATGAGCCTTTCATGATCAATGATGTGAATCTCATC ACTACCAGATTACCATGCGTTGAAATTGTCTCGCCTAGTAAAGAATTTTCGGGTAAATATCTCGCAGATGGTGCG GTTGTTGGAATGAAGAAGCGTAAAAATACCATCGAAGTATCCTATTTTGGTGGTTGGATGGTAAAGTCATATGTT CTAGGCTTCAACGCATATTCGTGTGATCATTATATCCCTCCGGTTTCACGTATAAACGGGTTTCGGTAA |
Transcript | >AgabiH97|019760 ATGAATCTCCTCCGACTCCCTATCGAAATCATTGTTGATATTTTGTTATGCCTAGATGTTTCTGATGCATACGCT GTTCAAGCACTCAATCACTTTTTCCGCAACTTGTACAAAACATCTCTCATTCTTCAGTATGCTCTCGAGTGCAAA ATTGCTCACGTTCGCGACAATCCGAATTGCCATCTACCTATTCCCGAACGGCTACAAATTCTGAGAGAGAGGGAA TCAGCATGGAGCTCGCTAACGCCCACGTCCAAAAGGATAACAGCGCTTCCGGCTGGCCCGGGAAAATGCATATCA AATACAAGGCGTCTTAAAATACAGCCAAACCATTGCACGTTATTCGAGTACTCCAAAGTCAGTCAGTTGGCATTC CGGAAATATTTCCAAATCTCGTCGATCCGGGAAATCAAAGAAGATTCTTTCCATCCAATTCCGCTTGGGATTGGA AATCTCATGCACGTCGGCTTTTGCGTCGATGAGCATGATCTCATTGCCTGCCTCACGAAGAACAGCCTGCCTGAC TCTCAAATCGAGCTCAGACTCGTCCTGCTCCAGTACTCTACAGGAAAAGCTCATCCCCTTGCAATGGAGCCCAAC ATTCTCGTGTTCCGCAATGACGTTTCGAACAACTGTTACAACTTTATGGCCAATAATATAGAAATATTCGGTGAA AACCTCGTCCTCACGATTCGTTTGCTAAAAGCTGGCGTAGAGGTCGAGTGCATGTATGTTTATAATTGGAAAACG GGCCAAGCCAAATGTGAACCTATACCAGTGTCGAACTGTGATGTCGTCGTTCTCGATCAGAATCTAGTGATCGTC CCTGACCCCAAGGAATGGTCACTGTACATATTTTACATCCCCTCCTCGTCTTCTGGTGGACCTGTTAAGTTAATA CAGCAACTTGATCTCCCCCCATGTCACGTCGGCCGAAGTAGTTTCATATCATGTCGAAGCCTACCAAATCCAACC GAAGATGGTCGATTCCCTAAATATATATCATCTTCCATTCCCTTCATGGACAAGCCAGATACTGCTCTTATCTGC ATCACCCTACTCGCTACAGCTTCATTACTCGTTCACAGGGACTCAATCATGAGACTCCTTCCCCCTTCAGAAGAG TGGTCGGCCGTCACAAAGCATTTAATTCTTGATTGGGACTCTTGGGGGCCTCCTGTCACGGCAATTCAACGACGG GTCACTAGTACATATGGACAGCGTTCCCTATATGTCTCGGAGTTCGGCCTTCGCTGTTGTGACTTTAACAAACAC CACGTTCGCCGTTCCACTGAAGTCAAGCTGCCCGATCTCTATGAGCCTTTCATGATCAATGATGTGAATCTCATC ACTACCAGATTACCATGCGTTGAAATTGTCTCGCCTAGTAAAGAATTTTCGGGTAAATATCTCGCAGATGGTGCG GTTGTTGGAATGAAGAAGCGTAAAAATACCATCGAAGTATCCTATTTTGGTGGTTGGATGGTAAAGTCATATGTT CTAGGCTTCAACGCATATTCGTGTGATCATTATATCCCTCCGGTTTCACGTATAAACGGGTTTCGGTAA |
Gene | >AgabiH97|019760 ATGAATCTCCTCCGACTCCCTATCGAAATCATTGTTGATATTTTGTTATGCCTAGATGTTTCTGATGCATACGCT GTTCAAGCACTCAATCACTTTTTCCGCAACTTGTACAAAACATCTCTCATTCTTCAGTATGCTCTCGAGTGCAAA ATTGCTCACGTTCGCGACAATCCGAATTGCCATCTACCTATTCCCGAACGGCTACAAATTCTGAGAGAGAGGGAA TCAGCATGGAGCTCGCTAACGCCCACGTCCAAAAGGATAACAGCGCTTCCGGCTGGCCCGGGAAAATGCATATCA AATACAAGGCGTCTTAAAATACAGCCAAACCATTGCACGTTATTCGAGTACTCCAAAGTCAGTCAGTTGGCATTC CGGAAATATTTCCAAATCTCGTCGATCCGGGAAATCAAAGAAGATTCTTTCCATCCAATTCCGCTTGGGATTGGA AATCTCATGCACGTCGGCTTTTGCGTCGATGAGCATGATCTCATTGCCTGCCTCACGAAGTGAGTAATACAGCAC TTATCATGAGGTGGCTATTCTGAAAGTCACCGGCCATAGGAACAGCCTGCCTGACTCTCAAATCGAGCTCAGACT CGTCCTGCTCCAGTACTCTACAGGAAAAGCTCATCCCCTTGCAATGGAGCCCAACATTCTCGTGTTCCGCAATGA CGTTTCGAACAACTGTTACAACTTTATGGCCAATAATATAGAAATATTCGGTGAAAACCTCGTCCTCACGATTCG TTTGCTAAAAGCTGGCGTAGAGGTCGAGTGCATGTATGTTTATAATTGGAAAACGGGCCAAGCCAAATGTGTGCG TTGTCCTTAGGATACTCATGACCAGTTGACCCAAATCTCTTCACAAAGGAACCTATACCAGTGTCGAACTGTGAT GTCGTCGTTCTCGATCAGAATCTAGTGATCGTCCCTGACCCCAAGGAATGGTCACTGTACATATTTTACATCCCC TCCTCGTCTTCTGGTGGACCTGTTAAGTTAATACAGCAACTTGATCTCCCCCCATGTCACGTCGGCCGAAGTAGT TTCATATCATGTCGAAGCCTACCAAATCCAACCGAAGATGGTCGATTCCCTAAATATATATCATCTTCCATTCCC TTCATGGACAAGCCAGATACTGCTCTTATCTGCATCACCCTACTCGCTACAGCTTCATTACTCGTTCACAGGGAC TCAATCATGAGACTCCTTCCCCCTTCAGAAGAGTGGTCGGCCGTCACAAAGCATTTAATTCTTGATTGGGACTCT TGGGGGCCTCCTGTCACGGCAATTCAACGACGGGTCACTAGTACATATGGACAGCGTTCCCTATATGTCTCGGAG TTCGGCCTTCGCTGTTGTGACTTTAACAAACACCACGTTCGCCGTTCCACTGAAGTCAAGCTGCCCGATCTCTAT GAGCCTTTCATGATCAATGATGTGAATCTCATCACTACCAGATTACCATGCGTTGAAATTGTCTCGCCTAGTAAA GAATTTTCGGGTAAATATCTCGCAGATGGTGCGGTTGTTGGAATGAAGGTTAGGCCATTCTTGACTGATTGAGAC GCTGCTGACGTTTTGAAGAAGCGTAAAAATACCATCGAAGTATCCTATTTTGGTCAATAAAAATGCTGCTGGATT TACCATCGCGCAGTCGTTGTCATGCAGGTGAAGTCTGATGGATCATGACGCACCGACTAGGTGGTTGGATGGTAA AGTAAGCTGACCCGTTGCATCAGATCTTTTCCATAATCTGACGTTGTGTTCACCTAGGTCATATGTTCTAGGCTT CAACGCATATTCGTGTGATCATTATATCCCTCCGGTTTCACGTATAAACGGGTTTCGGTAA |