Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|019760
Gene name
Locationscaffold_10:1268580..1270441
Strand-
Gene length (bp)1861
Transcript length (bp)1569
Coding sequence length (bp)1569
Protein length (aa) 523

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|019760
MNLLRLPIEIIVDILLCLDVSDAYAVQALNHFFRNLYKTSLILQYALECKIAHVRDNPNCHLPIPERLQILRERE
SAWSSLTPTSKRITALPAGPGKCISNTRRLKIQPNHCTLFEYSKVSQLAFRKYFQISSIREIKEDSFHPIPLGIG
NLMHVGFCVDEHDLIACLTKNSLPDSQIELRLVLLQYSTGKAHPLAMEPNILVFRNDVSNNCYNFMANNIEIFGE
NLVLTIRLLKAGVEVECMYVYNWKTGQAKCEPIPVSNCDVVVLDQNLVIVPDPKEWSLYIFYIPSSSSGGPVKLI
QQLDLPPCHVGRSSFISCRSLPNPTEDGRFPKYISSSIPFMDKPDTALICITLLATASLLVHRDSIMRLLPPSEE
WSAVTKHLILDWDSWGPPVTAIQRRVTSTYGQRSLYVSEFGLRCCDFNKHHVRRSTEVKLPDLYEPFMINDVNLI
TTRLPCVEIVSPSKEFSGKYLADGAVVGMKKRKNTIEVSYFGGWMVKSYVLGFNAYSCDHYIPPVSRINGFR*
Coding >AgabiH97|019760
ATGAATCTCCTCCGACTCCCTATCGAAATCATTGTTGATATTTTGTTATGCCTAGATGTTTCTGATGCATACGCT
GTTCAAGCACTCAATCACTTTTTCCGCAACTTGTACAAAACATCTCTCATTCTTCAGTATGCTCTCGAGTGCAAA
ATTGCTCACGTTCGCGACAATCCGAATTGCCATCTACCTATTCCCGAACGGCTACAAATTCTGAGAGAGAGGGAA
TCAGCATGGAGCTCGCTAACGCCCACGTCCAAAAGGATAACAGCGCTTCCGGCTGGCCCGGGAAAATGCATATCA
AATACAAGGCGTCTTAAAATACAGCCAAACCATTGCACGTTATTCGAGTACTCCAAAGTCAGTCAGTTGGCATTC
CGGAAATATTTCCAAATCTCGTCGATCCGGGAAATCAAAGAAGATTCTTTCCATCCAATTCCGCTTGGGATTGGA
AATCTCATGCACGTCGGCTTTTGCGTCGATGAGCATGATCTCATTGCCTGCCTCACGAAGAACAGCCTGCCTGAC
TCTCAAATCGAGCTCAGACTCGTCCTGCTCCAGTACTCTACAGGAAAAGCTCATCCCCTTGCAATGGAGCCCAAC
ATTCTCGTGTTCCGCAATGACGTTTCGAACAACTGTTACAACTTTATGGCCAATAATATAGAAATATTCGGTGAA
AACCTCGTCCTCACGATTCGTTTGCTAAAAGCTGGCGTAGAGGTCGAGTGCATGTATGTTTATAATTGGAAAACG
GGCCAAGCCAAATGTGAACCTATACCAGTGTCGAACTGTGATGTCGTCGTTCTCGATCAGAATCTAGTGATCGTC
CCTGACCCCAAGGAATGGTCACTGTACATATTTTACATCCCCTCCTCGTCTTCTGGTGGACCTGTTAAGTTAATA
CAGCAACTTGATCTCCCCCCATGTCACGTCGGCCGAAGTAGTTTCATATCATGTCGAAGCCTACCAAATCCAACC
GAAGATGGTCGATTCCCTAAATATATATCATCTTCCATTCCCTTCATGGACAAGCCAGATACTGCTCTTATCTGC
ATCACCCTACTCGCTACAGCTTCATTACTCGTTCACAGGGACTCAATCATGAGACTCCTTCCCCCTTCAGAAGAG
TGGTCGGCCGTCACAAAGCATTTAATTCTTGATTGGGACTCTTGGGGGCCTCCTGTCACGGCAATTCAACGACGG
GTCACTAGTACATATGGACAGCGTTCCCTATATGTCTCGGAGTTCGGCCTTCGCTGTTGTGACTTTAACAAACAC
CACGTTCGCCGTTCCACTGAAGTCAAGCTGCCCGATCTCTATGAGCCTTTCATGATCAATGATGTGAATCTCATC
ACTACCAGATTACCATGCGTTGAAATTGTCTCGCCTAGTAAAGAATTTTCGGGTAAATATCTCGCAGATGGTGCG
GTTGTTGGAATGAAGAAGCGTAAAAATACCATCGAAGTATCCTATTTTGGTGGTTGGATGGTAAAGTCATATGTT
CTAGGCTTCAACGCATATTCGTGTGATCATTATATCCCTCCGGTTTCACGTATAAACGGGTTTCGGTAA
Transcript >AgabiH97|019760
ATGAATCTCCTCCGACTCCCTATCGAAATCATTGTTGATATTTTGTTATGCCTAGATGTTTCTGATGCATACGCT
GTTCAAGCACTCAATCACTTTTTCCGCAACTTGTACAAAACATCTCTCATTCTTCAGTATGCTCTCGAGTGCAAA
ATTGCTCACGTTCGCGACAATCCGAATTGCCATCTACCTATTCCCGAACGGCTACAAATTCTGAGAGAGAGGGAA
TCAGCATGGAGCTCGCTAACGCCCACGTCCAAAAGGATAACAGCGCTTCCGGCTGGCCCGGGAAAATGCATATCA
AATACAAGGCGTCTTAAAATACAGCCAAACCATTGCACGTTATTCGAGTACTCCAAAGTCAGTCAGTTGGCATTC
CGGAAATATTTCCAAATCTCGTCGATCCGGGAAATCAAAGAAGATTCTTTCCATCCAATTCCGCTTGGGATTGGA
AATCTCATGCACGTCGGCTTTTGCGTCGATGAGCATGATCTCATTGCCTGCCTCACGAAGAACAGCCTGCCTGAC
TCTCAAATCGAGCTCAGACTCGTCCTGCTCCAGTACTCTACAGGAAAAGCTCATCCCCTTGCAATGGAGCCCAAC
ATTCTCGTGTTCCGCAATGACGTTTCGAACAACTGTTACAACTTTATGGCCAATAATATAGAAATATTCGGTGAA
AACCTCGTCCTCACGATTCGTTTGCTAAAAGCTGGCGTAGAGGTCGAGTGCATGTATGTTTATAATTGGAAAACG
GGCCAAGCCAAATGTGAACCTATACCAGTGTCGAACTGTGATGTCGTCGTTCTCGATCAGAATCTAGTGATCGTC
CCTGACCCCAAGGAATGGTCACTGTACATATTTTACATCCCCTCCTCGTCTTCTGGTGGACCTGTTAAGTTAATA
CAGCAACTTGATCTCCCCCCATGTCACGTCGGCCGAAGTAGTTTCATATCATGTCGAAGCCTACCAAATCCAACC
GAAGATGGTCGATTCCCTAAATATATATCATCTTCCATTCCCTTCATGGACAAGCCAGATACTGCTCTTATCTGC
ATCACCCTACTCGCTACAGCTTCATTACTCGTTCACAGGGACTCAATCATGAGACTCCTTCCCCCTTCAGAAGAG
TGGTCGGCCGTCACAAAGCATTTAATTCTTGATTGGGACTCTTGGGGGCCTCCTGTCACGGCAATTCAACGACGG
GTCACTAGTACATATGGACAGCGTTCCCTATATGTCTCGGAGTTCGGCCTTCGCTGTTGTGACTTTAACAAACAC
CACGTTCGCCGTTCCACTGAAGTCAAGCTGCCCGATCTCTATGAGCCTTTCATGATCAATGATGTGAATCTCATC
ACTACCAGATTACCATGCGTTGAAATTGTCTCGCCTAGTAAAGAATTTTCGGGTAAATATCTCGCAGATGGTGCG
GTTGTTGGAATGAAGAAGCGTAAAAATACCATCGAAGTATCCTATTTTGGTGGTTGGATGGTAAAGTCATATGTT
CTAGGCTTCAACGCATATTCGTGTGATCATTATATCCCTCCGGTTTCACGTATAAACGGGTTTCGGTAA
Gene >AgabiH97|019760
ATGAATCTCCTCCGACTCCCTATCGAAATCATTGTTGATATTTTGTTATGCCTAGATGTTTCTGATGCATACGCT
GTTCAAGCACTCAATCACTTTTTCCGCAACTTGTACAAAACATCTCTCATTCTTCAGTATGCTCTCGAGTGCAAA
ATTGCTCACGTTCGCGACAATCCGAATTGCCATCTACCTATTCCCGAACGGCTACAAATTCTGAGAGAGAGGGAA
TCAGCATGGAGCTCGCTAACGCCCACGTCCAAAAGGATAACAGCGCTTCCGGCTGGCCCGGGAAAATGCATATCA
AATACAAGGCGTCTTAAAATACAGCCAAACCATTGCACGTTATTCGAGTACTCCAAAGTCAGTCAGTTGGCATTC
CGGAAATATTTCCAAATCTCGTCGATCCGGGAAATCAAAGAAGATTCTTTCCATCCAATTCCGCTTGGGATTGGA
AATCTCATGCACGTCGGCTTTTGCGTCGATGAGCATGATCTCATTGCCTGCCTCACGAAGTGAGTAATACAGCAC
TTATCATGAGGTGGCTATTCTGAAAGTCACCGGCCATAGGAACAGCCTGCCTGACTCTCAAATCGAGCTCAGACT
CGTCCTGCTCCAGTACTCTACAGGAAAAGCTCATCCCCTTGCAATGGAGCCCAACATTCTCGTGTTCCGCAATGA
CGTTTCGAACAACTGTTACAACTTTATGGCCAATAATATAGAAATATTCGGTGAAAACCTCGTCCTCACGATTCG
TTTGCTAAAAGCTGGCGTAGAGGTCGAGTGCATGTATGTTTATAATTGGAAAACGGGCCAAGCCAAATGTGTGCG
TTGTCCTTAGGATACTCATGACCAGTTGACCCAAATCTCTTCACAAAGGAACCTATACCAGTGTCGAACTGTGAT
GTCGTCGTTCTCGATCAGAATCTAGTGATCGTCCCTGACCCCAAGGAATGGTCACTGTACATATTTTACATCCCC
TCCTCGTCTTCTGGTGGACCTGTTAAGTTAATACAGCAACTTGATCTCCCCCCATGTCACGTCGGCCGAAGTAGT
TTCATATCATGTCGAAGCCTACCAAATCCAACCGAAGATGGTCGATTCCCTAAATATATATCATCTTCCATTCCC
TTCATGGACAAGCCAGATACTGCTCTTATCTGCATCACCCTACTCGCTACAGCTTCATTACTCGTTCACAGGGAC
TCAATCATGAGACTCCTTCCCCCTTCAGAAGAGTGGTCGGCCGTCACAAAGCATTTAATTCTTGATTGGGACTCT
TGGGGGCCTCCTGTCACGGCAATTCAACGACGGGTCACTAGTACATATGGACAGCGTTCCCTATATGTCTCGGAG
TTCGGCCTTCGCTGTTGTGACTTTAACAAACACCACGTTCGCCGTTCCACTGAAGTCAAGCTGCCCGATCTCTAT
GAGCCTTTCATGATCAATGATGTGAATCTCATCACTACCAGATTACCATGCGTTGAAATTGTCTCGCCTAGTAAA
GAATTTTCGGGTAAATATCTCGCAGATGGTGCGGTTGTTGGAATGAAGGTTAGGCCATTCTTGACTGATTGAGAC
GCTGCTGACGTTTTGAAGAAGCGTAAAAATACCATCGAAGTATCCTATTTTGGTCAATAAAAATGCTGCTGGATT
TACCATCGCGCAGTCGTTGTCATGCAGGTGAAGTCTGATGGATCATGACGCACCGACTAGGTGGTTGGATGGTAA
AGTAAGCTGACCCGTTGCATCAGATCTTTTCCATAATCTGACGTTGTGTTCACCTAGGTCATATGTTCTAGGCTT
CAACGCATATTCGTGTGATCATTATATCCCTCCGGTTTCACGTATAAACGGGTTTCGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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