Fungal Genomics

General Properties

Protein ID	AgabiH97|019730
Gene name
Location	scaffold_10:1262702..1263873
Strand	+
Gene length (bp)	1171
Transcript length (bp)	888
Coding sequence length (bp)	888
Protein length (aa)	296

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Cell membrane	Transmembrane domain	0.127	0.1193	0.1204	0.3979	0.17	0.0017	0.0639	0.2655	0.3792	0.0045

SignalP

(None)

Transmembrane Domains

Domain #	Start	End	Length
1	7	29	22
2	44	66	22
3	79	101	22
4	121	143	22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Orthologs

Orthofinder run ID	1
Orthogroup	1245
Change Orthofinder run	1: Agaricomycetes 5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|019720
Agaricus bisporus var bisporus H39	AgabiH39|019730
Agaricus bisporus var bisporus H39	AgabiH39|019740
Agaricus bisporus var bisporus H39	AgabiH39|019750
Agaricus bisporus var bisporus H39	AgabiH39|019950
Agaricus bisporus var bisporus H39	AgabiH39|020020
Agaricus bisporus var bisporus H39	AgabiH39|479900
Agaricus bisporus var bisporus H39	AgabiH39|539400
Agaricus bisporus var bisporus H97	AgabiH97|019720
Agaricus bisporus var bisporus H97	AgabiH97|019730 (this protein)
Agaricus bisporus var bisporus H97	AgabiH97|019740
Agaricus bisporus var bisporus H97	AgabiH97|019750
Agaricus bisporus var bisporus H97	AgabiH97|019950
Agaricus bisporus var bisporus H97	AgabiH97|020020
Agaricus bisporus var bisporus H97	AgabiH97|020210
Agaricus bisporus var bisporus H97	AgabiH97|034710

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97|019730 MTMVVILLFICSTTVLGLQLALVMRSYMYLLQSREDDFETERRAFILSQGVLLIFQTIIADGVLLFRCWTIWNKM ILAIVLPLVLWAGCLGSSVYAIYCLYFRIFTGPKPISTEESVYPAFVTFWTCTIIVNIYCTGMIVGRICSVQQGW RPPSICSLRDLPQRTRLHLAKRIVVESAMIYTAASLGAFISHASESRAVDITYLAESQVVGIAFNLILIRRSSPT QDRESELCVRCFNPKTNRSIADATVGTTDSLDIPDVSLSASEEDNRLERMNIIYRARPHTSSTNSLEEIH*
Coding	>AgabiH97|019730 ATGACGATGGTCGTTATCCTCCTTTTCATCTGTTCCACAACTGTCTTGGGACTCCAGCTTGCCCTTGTTATGCGG AGTTATATGTACTTGTTGCAGTCTCGTGAAGACGACTTTGAGACGGAACGAAGAGCGTTCATTCTCTCACAAGGG GTCCTGCTGATTTTTCAGACAATCATTGCAGACGGCGTCTTGCTCTTCAGGTGTTGGACTATCTGGAATAAGATG ATTCTTGCTATAGTTCTACCCCTGGTTCTTTGGGCAGGCTGTCTGGGTTCTAGCGTCTACGCTATTTACTGCTTA TATTTTCGGATCTTCACGGGCCCGAAACCAATATCTACTGAGGAAAGTGTTTATCCAGCCTTCGTGACATTCTGG ACTTGCACAATCATCGTGAACATTTACTGCACAGGAATGATTGTGGGGAGAATTTGTTCCGTGCAACAGGGTTGG AGACCGCCCTCCATATGTTCTTTACGGGATCTACCACAACGAACCCGACTGCATCTTGCCAAACGTATAGTCGTC GAGTCGGCTATGATATATACCGCGGCATCATTGGGCGCCTTTATCAGTCATGCTTCTGAGAGCCGCGCAGTTGAC ATCACATATCTAGCCGAATCTCAAGTTGTCGGGATTGCTTTCAATTTGATACTTATCAGACGTTCGTCTCCGACG CAGGACCGGGAAAGCGAATTATGCGTCAGATGTTTTAATCCGAAGACGAATCGCTCGATAGCTGACGCTACGGTC GGAACCACAGACTCGCTTGATATACCAGATGTGTCATTGAGCGCTAGTGAGGAAGATAACAGATTGGAAAGAATG AATATCATATACCGTGCCAGACCTCATACTAGTTCCACCAACTCGCTCGAAGAAATTCATTGA
Transcript	>AgabiH97|019730 ATGACGATGGTCGTTATCCTCCTTTTCATCTGTTCCACAACTGTCTTGGGACTCCAGCTTGCCCTTGTTATGCGG AGTTATATGTACTTGTTGCAGTCTCGTGAAGACGACTTTGAGACGGAACGAAGAGCGTTCATTCTCTCACAAGGG GTCCTGCTGATTTTTCAGACAATCATTGCAGACGGCGTCTTGCTCTTCAGGTGTTGGACTATCTGGAATAAGATG ATTCTTGCTATAGTTCTACCCCTGGTTCTTTGGGCAGGCTGTCTGGGTTCTAGCGTCTACGCTATTTACTGCTTA TATTTTCGGATCTTCACGGGCCCGAAACCAATATCTACTGAGGAAAGTGTTTATCCAGCCTTCGTGACATTCTGG ACTTGCACAATCATCGTGAACATTTACTGCACAGGAATGATTGTGGGGAGAATTTGTTCCGTGCAACAGGGTTGG AGACCGCCCTCCATATGTTCTTTACGGGATCTACCACAACGAACCCGACTGCATCTTGCCAAACGTATAGTCGTC GAGTCGGCTATGATATATACCGCGGCATCATTGGGCGCCTTTATCAGTCATGCTTCTGAGAGCCGCGCAGTTGAC ATCACATATCTAGCCGAATCTCAAGTTGTCGGGATTGCTTTCAATTTGATACTTATCAGACGTTCGTCTCCGACG CAGGACCGGGAAAGCGAATTATGCGTCAGATGTTTTAATCCGAAGACGAATCGCTCGATAGCTGACGCTACGGTC GGAACCACAGACTCGCTTGATATACCAGATGTGTCATTGAGCGCTAGTGAGGAAGATAACAGATTGGAAAGAATG AATATCATATACCGTGCCAGACCTCATACTAGTTCCACCAACTCGCTCGAAGAAATTCATTGA
Gene	>AgabiH97|019730 ATGACGATGGTCGTTATCCTCCTTTTCATCTGTTCCACAACTGTCTTGGGACTCCAGCTTGCCCTTGTTATGCGG AGTTATATGTACTTGTTGCAGTCTCGTGAAGACGACTTTGAGACGGAACGAAGAGCGTTCATTCTCTCACAAGTA AGCTTTCCCCTTTTTCTTTGGCCCGATTGCGAGCCTGAGTTGTCGCGGACAATGCGTTAACGTCCAGCCATATTA GGGGGTCCTGCTGATTTTTCAGACAATCATTGCAGACGGCGTCTTGGTAAGACTTTGAATTGATACCTGGGGGAA AAACTGACAATTGGGAACTTCAGCTCTTCAGGTGTTGGACTATCTGGAATAAGATGATTCTTGCTATAGTTCTAC CCCTGGTTCTTTGGGCAGGCTGTCTGGGTTCTAGCGTCTACGCTATTTACTGCTTATATTTTCGGATCTTCACGG GCCCGAAACCAATATCTACTGAGGAAAGTGTTTATCCAGCCTTCGTGACATTCTGGACTTGCACAATCATCGTGA ACATTTACTGCACAGGTAAGCCACCTAACCTGGAAAAACGTAACTTTATCATCGACTTACAATTTTGTAGGAATG ATTGTGGGGAGAATTTGTTCCGTGCAACAGGGTTGGAGACCGCCCTCCATATGTTCTTTACGGGATCTACCACAA CGAACCCGACTGCATCTTGCCAAACGTATAGTCGTCGAGTCGGCTATGATATATACCGCGGCATCATTGGGCGCC TTTATCAGTCATGCTTCTGAGAGCCGCGCAGTTGACATCACATATCTAGCCGTAGGTCACCCGGTTGTAGGACCG ATCACTCTCTTATCATGTTGAACAGGAATCTCAAGTTGTCGGGATTGCTTTCAATTTGATACTTATCAGACGTTC GTCTCCGACGCAGGACCGGGAAAGCGAATTATGCGTCAGATGTTTTAATCCGAAGACGAATCGCTCGATAGCTGA CGCTACGGTCGGAACCACAGACTCGCTTGATATACCAGATGTGTCATTGAGCGCTAGTGAGGAAGATAACAGATT GGAAAGAATGAATATCATATACCGTGCCAGACCTCATACTAGGTGTATTGTATCACTTAATCAGAATTGTTCATA GTCCGGTTATTGTAGTTCCACCAACTCGCTCGAAGAAATTCATTGA