Protein ID | AgabiH97|019690 |
Gene name | |
Location | scaffold_10:1252761..1255179 |
Strand | - |
Gene length (bp) | 2418 |
Transcript length (bp) | 1572 |
Coding sequence length (bp) | 1572 |
Protein length (aa) | 524 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07690 | MFS_1 | Major Facilitator Superfamily | 1.2E-33 | 84 | 435 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q7Z9I0|YHA8_SCHPO | Uncharacterized MFS-type transporter C409.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC409.08 PE=3 SV=1 | 25 | 506 | 9.0E-76 |
sp|O74829|YN2F_SCHPO | Uncharacterized MFS-type transporter C530.15c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC530.15c PE=1 SV=2 | 49 | 506 | 4.0E-73 |
sp|Q10084|MFS2_SCHPO | Uncharacterized transporter mfs2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mfs2 PE=3 SV=1 | 32 | 511 | 7.0E-72 |
sp|O94528|CAF5_SCHPO | Caffeine resistance protein 5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=caf5 PE=3 SV=1 | 18 | 508 | 2.0E-69 |
sp|P38124|FLR1_YEAST | Fluconazole resistance protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLR1 PE=1 SV=1 | 59 | 510 | 4.0E-69 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q7Z9I0|YHA8_SCHPO | Uncharacterized MFS-type transporter C409.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC409.08 PE=3 SV=1 | 25 | 506 | 9.0E-76 |
sp|O74829|YN2F_SCHPO | Uncharacterized MFS-type transporter C530.15c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC530.15c PE=1 SV=2 | 49 | 506 | 4.0E-73 |
sp|Q10084|MFS2_SCHPO | Uncharacterized transporter mfs2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mfs2 PE=3 SV=1 | 32 | 511 | 7.0E-72 |
sp|O94528|CAF5_SCHPO | Caffeine resistance protein 5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=caf5 PE=3 SV=1 | 18 | 508 | 2.0E-69 |
sp|P38124|FLR1_YEAST | Fluconazole resistance protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLR1 PE=1 SV=1 | 59 | 510 | 4.0E-69 |
sp|Q9Y7S4|YQO5_SCHPO | Uncharacterized transporter C569.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC569.05c PE=3 SV=1 | 11 | 508 | 9.0E-69 |
sp|O59699|YN42_SCHPO | Uncharacterized transporter C36.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC36.02c PE=3 SV=1 | 4 | 508 | 3.0E-68 |
sp|O59814|YCT4_SCHPO | Uncharacterized transporter C794.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.04c PE=3 SV=1 | 11 | 510 | 4.0E-67 |
sp|P38776|YHK8_YEAST | Probable drug/proton antiporter YHK8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHK8 PE=1 SV=1 | 18 | 508 | 2.0E-66 |
sp|Q12256|TPO4_YEAST | Polyamine transporter 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO4 PE=1 SV=1 | 24 | 517 | 5.0E-65 |
sp|Q10487|MFS1_SCHPO | Transporter mfs1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mfs1 PE=3 SV=1 | 21 | 508 | 1.0E-64 |
sp|O59700|YN43_SCHPO | Uncharacterized transporter C36.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC36.03c PE=3 SV=1 | 17 | 506 | 2.0E-62 |
sp|Q06451|TPO3_YEAST | Polyamine transporter 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO3 PE=1 SV=1 | 18 | 504 | 9.0E-62 |
sp|P53283|TPO2_YEAST | Polyamine transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO2 PE=1 SV=1 | 41 | 504 | 2.0E-61 |
sp|O59738|YN22_SCHPO | Uncharacterized transporter C530.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC530.02 PE=3 SV=1 | 60 | 511 | 4.0E-61 |
sp|O59698|YN41_SCHPO | Uncharacterized transporter C36.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC36.01c PE=1 SV=1 | 25 | 510 | 4.0E-60 |
sp|O43081|YHS6_SCHPO | Uncharacterized MFS-type transporter C947.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC947.06c PE=3 SV=1 | 49 | 511 | 1.0E-58 |
sp|Q07824|TPO1_YEAST | Polyamine transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO1 PE=1 SV=1 | 18 | 508 | 2.0E-58 |
sp|Q5ABU7|MDR1_CANAL | Multidrug resistance protein 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MDR1 PE=1 SV=1 | 60 | 509 | 3.0E-54 |
sp|P28873|BMRP_CANAX | Benomyl/methotrexate resistance protein OS=Candida albicans GN=MDR1 PE=3 SV=1 | 60 | 509 | 4.0E-54 |
sp|P32071|CYHR_CANMA | Cycloheximide resistance protein OS=Candida maltosa GN=CYHR PE=3 SV=1 | 16 | 508 | 1.0E-53 |
sp|Q9USN4|YJA1_SCHPO | Uncharacterized transporter C1529.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1529.01 PE=3 SV=2 | 25 | 498 | 5.0E-53 |
sp|Q9P3E8|YLZ2_SCHPO | Uncharacterized transporter C750.02c/PB2B2.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC750.02c PE=3 SV=1 | 55 | 508 | 1.0E-49 |
sp|Q9P3V5|YI45_SCHPO | Uncharacterized transporter C1348.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1348.05 PE=3 SV=1 | 55 | 508 | 3.0E-49 |
sp|O74899|YQEH_SCHPO | Uncharacterized transporter C576.17c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC576.17c PE=1 SV=1 | 16 | 511 | 2.0E-45 |
sp|P33532|BSU1_SCHPO | Vitamin B6 transporter bsu1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bsu1 PE=3 SV=2 | 9 | 508 | 6.0E-45 |
sp|Q9HDX4|MFC1_SCHPO | Uncharacterized transporter mfc1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mfc1 PE=3 SV=2 | 61 | 509 | 1.0E-44 |
sp|O59833|YCUD_SCHPO | Uncharacterized transporter C965.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC965.13 PE=3 SV=1 | 16 | 520 | 3.0E-35 |
sp|Q59XM0|QDR3_CANAL | MFS antiporter QDR3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=QDR3 PE=2 SV=1 | 56 | 283 | 2.0E-26 |
sp|P38125|DTR1_YEAST | Dityrosine transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DTR1 PE=1 SV=1 | 11 | 496 | 1.0E-15 |
sp|P53943|AQR1_YEAST | Probable transporter AQR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AQR1 PE=1 SV=1 | 9 | 259 | 3.0E-12 |
sp|P38227|QDR3_YEAST | Quinidine resistance protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QDR3 PE=1 SV=2 | 8 | 283 | 1.0E-11 |
sp|P38227|QDR3_YEAST | Quinidine resistance protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QDR3 PE=1 SV=2 | 334 | 509 | 3.0E-11 |
sp|Q59YT1|QDR2_CANAL | MFS antiporter QDR2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=QDR2 PE=3 SV=1 | 38 | 402 | 1.0E-10 |
sp|O94343|YHMA_SCHPO | Uncharacterized MFS-type transporter C1271.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1271.10c PE=1 SV=1 | 47 | 290 | 2.0E-10 |
sp|P40475|QDR1_YEAST | Quinidine resistance protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QDR1 PE=1 SV=1 | 16 | 260 | 5.0E-10 |
sp|G2TRN8|YI74_SCHPO | Putative uncharacterized transporter C977.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC977.04 PE=5 SV=1 | 364 | 508 | 2.0E-09 |
sp|Q5A6P6|QDR1_CANAL | MFS antiporter QDR1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=QDR PE=2 SV=1 | 25 | 402 | 3.0E-09 |
sp|P44927|EMRB_HAEIN | Multidrug export protein EmrB OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=emrB PE=3 SV=1 | 88 | 266 | 5.0E-09 |
sp|P53389|HOL1_YEAST | Protein HOL1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HOL1 PE=1 SV=1 | 56 | 255 | 1.0E-08 |
sp|P54585|YHCA_BACSU | Uncharacterized MFS-type transporter YhcA OS=Bacillus subtilis (strain 168) GN=yhcA PE=3 SV=2 | 105 | 254 | 4.0E-08 |
sp|P40474|QDR2_YEAST | Quinidine resistance protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QDR2 PE=1 SV=1 | 40 | 259 | 6.0E-08 |
sp|P42670|PUR8_STRAD | Puromycin resistance protein pur8 OS=Streptomyces alboniger GN=pur8 PE=3 SV=1 | 58 | 237 | 2.0E-07 |
sp|Q9D2V8|MFS10_MOUSE | Major facilitator superfamily domain-containing protein 10 OS=Mus musculus GN=Mfsd10 PE=1 SV=1 | 95 | 255 | 4.0E-07 |
sp|Q14728|MFS10_HUMAN | Major facilitator superfamily domain-containing protein 10 OS=Homo sapiens GN=MFSD10 PE=1 SV=1 | 95 | 255 | 8.0E-07 |
sp|P39886|TCMA_STRGA | Tetracenomycin C resistance and export protein OS=Streptomyces glaucescens GN=tcmA PE=3 SV=1 | 58 | 257 | 9.0E-07 |
sp|P28246|BCR_ECOLI | Bicyclomycin resistance protein OS=Escherichia coli (strain K12) GN=bcr PE=1 SV=4 | 72 | 255 | 2.0E-06 |
sp|P9WG89|EMRB_MYCTU | Multidrug resistance protein B homolog OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=emrB PE=3 SV=1 | 104 | 256 | 2.0E-06 |
sp|P9WG88|EMRB_MYCTO | Multidrug resistance protein B homolog OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=emrB PE=3 SV=1 | 104 | 256 | 2.0E-06 |
sp|P46105|ACT22_STRCO | Probable actinorhodin transporter OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=actII-2 PE=3 SV=1 | 34 | 259 | 3.0E-06 |
sp|Q0P5M9|MFS10_BOVIN | Major facilitator superfamily domain-containing protein 10 OS=Bos taurus GN=MFSD10 PE=2 SV=1 | 95 | 255 | 4.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0055085 | transmembrane transport | Yes |
GO:0022857 | transmembrane transporter activity | Yes |
GO:0051179 | localization | No |
GO:0003674 | molecular_function | No |
GO:0051234 | establishment of localization | No |
GO:0008150 | biological_process | No |
GO:0009987 | cellular process | No |
GO:0005215 | transporter activity | No |
GO:0006810 | transport | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 32 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 75 | 97 | 22 |
2 | 112 | 134 | 22 |
3 | 141 | 158 | 17 |
4 | 171 | 193 | 22 |
5 | 200 | 222 | 22 |
6 | 232 | 252 | 20 |
7 | 307 | 329 | 22 |
8 | 344 | 361 | 17 |
9 | 382 | 404 | 22 |
10 | 409 | 431 | 22 |
11 | 451 | 469 | 18 |
12 | 479 | 501 | 22 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Casing | Casing mycelium | 13.35 | 6.62 | 20.09 |
Initials | Initials knots | 9.53 | 4.77 | 14.28 |
Pileal_Stipeal_center | Stage I stipe center | 2.52 | 1.02 | 4.02 |
Pileal_Stipeal_shell | Stage I stipe shell | 11.24 | 5.67 | 16.81 |
DIF_stipe_center | Stage II stipe center | 1.59 | 0.54 | 2.65 |
DIF_stipe_shell | Stage II stipe shell | 1.95 | 0.72 | 3.18 |
DIF_stipe_skin | Stage II stipe skin | 4.01 | 1.76 | 6.26 |
DIF_cap_skin | Stage II cap skin | 17.25 | 9.33 | 25.17 |
DIF_cap_tissue | Stage II cap tissue | 18.38 | 10.04 | 26.72 |
DIF_gill_tissue | Stage II gill tissue | 19.40 | 10.42 | 28.39 |
YFB_stipe_center | Young fruiting body stipe center | 2.33 | 0.87 | 3.80 |
YFB_stipe_shell | Young fruiting body stipe shell | 1.71 | 0.62 | 2.81 |
YFB_stipe_skin | Young fruiting body stipe skin | 3.41 | 1.45 | 5.37 |
YFB_cap_skin | Young fruiting body cap skin | 12.31 | 6.26 | 18.37 |
YFB_cap_tissue | Young fruiting body cap tissue | 7.17 | 3.23 | 11.11 |
YFB_gill_tissue | Young fruiting body gill tissue | 12.12 | 5.83 | 18.41 |
YFB_veil | Young fruiting body veil | 8.68 | 3.62 | 13.75 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Casing | DIF_gill_tissue | 0.350328 | no |
Casing | YFB_stipe_center | 0.000613 | yes |
Casing | YFB_stipe_shell | 0.000613 | yes |
Casing | YFB_stipe_skin | 0.000613 | yes |
Casing | YFB_cap_skin | 0.898711 | no |
Casing | YFB_cap_tissue | 0.094657 | no |
Casing | YFB_gill_tissue | 0.877836 | no |
Casing | YFB_veil | 0.322692 | no |
Casing | Initials | 0.443507 | no |
Casing | Pileal_Stipeal_center | 0.000613 | yes |
Casing | Pileal_Stipeal_shell | 0.757817 | no |
Casing | DIF_stipe_center | 0.000613 | yes |
Casing | DIF_stipe_shell | 0.000613 | yes |
Casing | DIF_stipe_skin | 0.000613 | yes |
Casing | DIF_cap_skin | 0.569149 | no |
Casing | DIF_cap_tissue | 0.446193 | no |
DIF_gill_tissue | YFB_stipe_center | 0.000613 | yes |
DIF_gill_tissue | YFB_stipe_shell | 0.000613 | yes |
DIF_gill_tissue | YFB_stipe_skin | 0.000613 | yes |
DIF_gill_tissue | YFB_cap_skin | 0.194728 | no |
DIF_gill_tissue | YFB_cap_tissue | 0.002951 | yes |
DIF_gill_tissue | YFB_gill_tissue | 0.175547 | no |
DIF_gill_tissue | YFB_veil | 0.017226 | yes |
YFB_stipe_center | YFB_stipe_shell | 0.603896 | no |
YFB_stipe_center | YFB_stipe_skin | 0.453704 | no |
YFB_stipe_center | YFB_cap_skin | 0.000613 | yes |
YFB_stipe_center | YFB_cap_tissue | 0.002084 | yes |
YFB_stipe_center | YFB_gill_tissue | 0.000613 | yes |
YFB_stipe_center | YFB_veil | 0.000613 | yes |
YFB_stipe_shell | YFB_stipe_skin | 0.102673 | no |
YFB_stipe_shell | YFB_cap_skin | 0.000613 | yes |
YFB_stipe_shell | YFB_cap_tissue | 0.000613 | yes |
YFB_stipe_shell | YFB_gill_tissue | 0.000613 | yes |
YFB_stipe_shell | YFB_veil | 0.000613 | yes |
YFB_stipe_skin | YFB_cap_skin | 0.000613 | yes |
YFB_stipe_skin | YFB_cap_tissue | 0.042475 | yes |
YFB_stipe_skin | YFB_gill_tissue | 0.000613 | yes |
YFB_stipe_skin | YFB_veil | 0.007782 | yes |
YFB_cap_skin | YFB_cap_tissue | 0.139408 | no |
YFB_cap_skin | YFB_gill_tissue | 0.980761 | no |
YFB_cap_skin | YFB_veil | 0.421378 | no |
YFB_cap_tissue | YFB_gill_tissue | 0.156775 | no |
YFB_cap_tissue | YFB_veil | 0.739388 | no |
YFB_gill_tissue | YFB_veil | 0.463453 | no |
Initials | DIF_gill_tissue | 0.025458 | yes |
Initials | YFB_stipe_center | 0.000613 | yes |
Initials | YFB_stipe_shell | 0.000613 | yes |
Initials | YFB_stipe_skin | 0.002525 | yes |
Initials | YFB_cap_skin | 0.577646 | no |
Initials | YFB_cap_tissue | 0.546875 | no |
Initials | YFB_gill_tissue | 0.612638 | no |
Initials | YFB_veil | 0.890791 | no |
Initials | Pileal_Stipeal_center | 0.000613 | yes |
Initials | Pileal_Stipeal_shell | 0.762913 | no |
Initials | DIF_stipe_center | 0.000613 | yes |
Initials | DIF_stipe_shell | 0.000613 | yes |
Initials | DIF_stipe_skin | 0.014081 | yes |
Initials | DIF_cap_skin | 0.074130 | no |
Initials | DIF_cap_tissue | 0.040947 | yes |
Pileal_Stipeal_center | DIF_gill_tissue | 0.000613 | yes |
Pileal_Stipeal_center | YFB_stipe_center | 0.926100 | no |
Pileal_Stipeal_center | YFB_stipe_shell | 0.471571 | no |
Pileal_Stipeal_center | YFB_stipe_skin | 0.571320 | no |
Pileal_Stipeal_center | YFB_cap_skin | 0.000613 | yes |
Pileal_Stipeal_center | YFB_cap_tissue | 0.005302 | yes |
Pileal_Stipeal_center | YFB_gill_tissue | 0.000613 | yes |
Pileal_Stipeal_center | YFB_veil | 0.000613 | yes |
Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.000613 | yes |
Pileal_Stipeal_center | DIF_stipe_center | 0.376873 | no |
Pileal_Stipeal_center | DIF_stipe_shell | 0.682261 | no |
Pileal_Stipeal_center | DIF_stipe_skin | 0.314520 | no |
Pileal_Stipeal_center | DIF_cap_skin | 0.000613 | yes |
Pileal_Stipeal_center | DIF_cap_tissue | 0.000613 | yes |
Pileal_Stipeal_shell | DIF_gill_tissue | 0.107603 | no |
Pileal_Stipeal_shell | YFB_stipe_center | 0.000613 | yes |
Pileal_Stipeal_shell | YFB_stipe_shell | 0.000613 | yes |
Pileal_Stipeal_shell | YFB_stipe_skin | 0.001140 | yes |
Pileal_Stipeal_shell | YFB_cap_skin | 0.882398 | no |
Pileal_Stipeal_shell | YFB_cap_tissue | 0.257879 | no |
Pileal_Stipeal_shell | YFB_gill_tissue | 0.907920 | no |
Pileal_Stipeal_shell | YFB_veil | 0.613898 | no |
Pileal_Stipeal_shell | DIF_stipe_center | 0.000613 | yes |
Pileal_Stipeal_shell | DIF_stipe_shell | 0.000613 | yes |
Pileal_Stipeal_shell | DIF_stipe_skin | 0.004548 | yes |
Pileal_Stipeal_shell | DIF_cap_skin | 0.232094 | no |
Pileal_Stipeal_shell | DIF_cap_tissue | 0.160253 | no |
DIF_stipe_center | DIF_gill_tissue | 0.000613 | yes |
DIF_stipe_center | YFB_stipe_center | 0.496484 | no |
DIF_stipe_center | YFB_stipe_shell | 0.933275 | no |
DIF_stipe_center | YFB_stipe_skin | 0.077517 | no |
DIF_stipe_center | YFB_cap_skin | 0.000613 | yes |
DIF_stipe_center | YFB_cap_tissue | 0.000613 | yes |
DIF_stipe_center | YFB_gill_tissue | 0.000613 | yes |
DIF_stipe_center | YFB_veil | 0.000613 | yes |
DIF_stipe_center | DIF_stipe_shell | 0.776053 | no |
DIF_stipe_center | DIF_stipe_skin | 0.027698 | yes |
DIF_stipe_center | DIF_cap_skin | 0.000613 | yes |
DIF_stipe_center | DIF_cap_tissue | 0.000613 | yes |
DIF_stipe_shell | DIF_gill_tissue | 0.000613 | yes |
DIF_stipe_shell | YFB_stipe_center | 0.802215 | no |
DIF_stipe_shell | YFB_stipe_shell | 0.868492 | no |
DIF_stipe_shell | YFB_stipe_skin | 0.217760 | no |
DIF_stipe_shell | YFB_cap_skin | 0.000613 | yes |
DIF_stipe_shell | YFB_cap_tissue | 0.000613 | yes |
DIF_stipe_shell | YFB_gill_tissue | 0.000613 | yes |
DIF_stipe_shell | YFB_veil | 0.000613 | yes |
DIF_stipe_shell | DIF_stipe_skin | 0.090997 | no |
DIF_stipe_shell | DIF_cap_skin | 0.000613 | yes |
DIF_stipe_shell | DIF_cap_tissue | 0.000613 | yes |
DIF_stipe_skin | DIF_gill_tissue | 0.000613 | yes |
DIF_stipe_skin | YFB_stipe_center | 0.224926 | no |
DIF_stipe_skin | YFB_stipe_shell | 0.034837 | yes |
DIF_stipe_skin | YFB_stipe_skin | 0.797268 | no |
DIF_stipe_skin | YFB_cap_skin | 0.000613 | yes |
DIF_stipe_skin | YFB_cap_tissue | 0.145389 | no |
DIF_stipe_skin | YFB_gill_tissue | 0.000613 | yes |
DIF_stipe_skin | YFB_veil | 0.041164 | yes |
DIF_stipe_skin | DIF_cap_skin | 0.000613 | yes |
DIF_stipe_skin | DIF_cap_tissue | 0.000613 | yes |
DIF_cap_skin | DIF_gill_tissue | 0.822381 | no |
DIF_cap_skin | YFB_stipe_center | 0.000613 | yes |
DIF_cap_skin | YFB_stipe_shell | 0.000613 | yes |
DIF_cap_skin | YFB_stipe_skin | 0.000613 | yes |
DIF_cap_skin | YFB_cap_skin | 0.375198 | no |
DIF_cap_skin | YFB_cap_tissue | 0.008457 | yes |
DIF_cap_skin | YFB_gill_tissue | 0.350576 | no |
DIF_cap_skin | YFB_veil | 0.050499 | no |
DIF_cap_skin | DIF_cap_tissue | 0.912837 | no |
DIF_cap_tissue | DIF_gill_tissue | 0.930279 | no |
DIF_cap_tissue | YFB_stipe_center | 0.000613 | yes |
DIF_cap_tissue | YFB_stipe_shell | 0.000613 | yes |
DIF_cap_tissue | YFB_stipe_skin | 0.000613 | yes |
DIF_cap_tissue | YFB_cap_skin | 0.267461 | no |
DIF_cap_tissue | YFB_cap_tissue | 0.004160 | yes |
DIF_cap_tissue | YFB_gill_tissue | 0.245331 | no |
DIF_cap_tissue | YFB_veil | 0.029648 | yes |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >AgabiH97|019690 MKFGQSYFSYFHAHPEPSKDTHTPDLEKDSTSKLTPLEPKENSLDTIAPEETIYVEYEPNDSRNPINFPRAKKWT ITFVASASTLFTSATAASYALGFPSMTRDLSATQFQATVGLSMYTLGFGVVPLVTASFSEEFGRRPLYLVSGLGF AIFYVMIAEAKNIQTVMVARLIQGSFGSTAATMVGGTIADIWAPAERGLPMAIFSLSALCGNGYGPLIAGWIEMN SRLGWRWIQWIQLIIFAVTLLLVFIFLEETRSTVLLMRIAKKLREETGRSYKARIEDESVSLKHLIWISCTRPIR LLLTEHVVLSFSLWIGFAWGVTYCMIQSIGMVFRTLHDFNDGQVGLVFISMLVGSFIGFFSNFYQEYLYKMYYPT RGPEARLYCACVAAFFLPIAMFIYAWCSFSHVHWIGLVVGITLFVAAMFVVYLAVFSYLADCYGPYASSALAGQS LARNIMATVFPLFTTQMYTNLTFKWANTLFGFLALAMIPIPFVLFFYGPSIRQRSKFSRRVLEAQQKASLEKM* |
Coding | >AgabiH97|019690 ATGAAGTTCGGTCAAAGCTATTTCTCTTATTTTCATGCTCATCCGGAGCCATCAAAGGATACCCATACCCCAGAC CTAGAGAAGGATTCAACTTCAAAACTCACTCCTCTTGAACCGAAGGAAAATTCTCTGGATACGATAGCTCCTGAA GAAACCATTTATGTTGAATATGAACCGAACGACTCAAGAAACCCTATCAATTTTCCTCGCGCGAAGAAATGGACG ATAACTTTTGTCGCATCTGCTTCCACTTTGTTCACTTCCGCTACAGCGGCATCATACGCCTTAGGTTTCCCTTCA ATGACACGCGATCTCTCTGCTACCCAGTTTCAAGCAACAGTCGGGCTCAGCATGTACACTCTAGGGTTTGGTGTA GTGCCATTGGTCACTGCATCGTTCTCTGAGGAGTTTGGTCGACGGCCACTATATCTCGTCTCCGGACTCGGATTC GCAATTTTCTATGTCATGATTGCTGAAGCAAAAAACATTCAAACCGTCATGGTGGCAAGACTCATACAAGGTTCA TTTGGCTCTACAGCGGCGACGATGGTTGGTGGTACAATTGCAGACATTTGGGCACCTGCCGAGCGTGGTCTACCT ATGGCTATCTTTTCGCTAAGTGCTCTATGCGGGAACGGTTATGGTCCTCTAATAGCGGGTTGGATCGAAATGAAT TCACGACTTGGTTGGCGTTGGATACAATGGATTCAGCTCATCATTTTCGCTGTTACTCTCTTATTAGTCTTTATA TTCCTTGAAGAGACCCGTTCTACTGTGCTCTTGATGCGTATAGCGAAGAAATTGAGAGAAGAGACAGGTCGAAGT TACAAGGCGAGAATAGAAGATGAGAGTGTGAGTTTGAAACATCTCATTTGGATTTCTTGTACACGACCCATTCGT CTATTACTTACGGAACATGTCGTCCTAAGTTTTAGCTTATGGATTGGTTTCGCTTGGGGTGTGACATATTGCATG ATTCAATCTATTGGAATGGTTTTTCGGACTTTGCACGACTTTAATGACGGACAGGTTGGCCTAGTATTCATAAGT ATGCTTGTGGGCTCTTTCATTGGATTTTTCTCGAATTTCTACCAAGAATACTTATACAAAATGTATTATCCAACG AGAGGCCCAGAAGCACGTCTCTATTGTGCTTGTGTAGCAGCATTTTTCTTGCCGATAGCGATGTTCATATATGCC TGGTGTTCATTCTCACATGTTCATTGGATAGGTTTGGTCGTTGGTATCACATTATTCGTGGCTGCTATGTTTGTT GTGTACCTTGCAGTTTTCTCATATCTCGCCGATTGTTATGGTCCCTATGCATCATCCGCTCTTGCAGGTCAAAGT CTTGCTCGTAACATAATGGCAACAGTTTTTCCTCTATTCACAACTCAAATGTATACCAACCTAACATTCAAATGG GCAAATACCTTGTTCGGATTTTTAGCTTTGGCTATGATACCTATTCCATTTGTATTGTTTTTTTATGGACCTAGT ATTCGACAAAGGAGTAAATTTTCGCGGAGGGTGTTGGAGGCGCAACAAAAAGCTTCTTTAGAGAAAATGTAG |
Transcript | >AgabiH97|019690 ATGAAGTTCGGTCAAAGCTATTTCTCTTATTTTCATGCTCATCCGGAGCCATCAAAGGATACCCATACCCCAGAC CTAGAGAAGGATTCAACTTCAAAACTCACTCCTCTTGAACCGAAGGAAAATTCTCTGGATACGATAGCTCCTGAA GAAACCATTTATGTTGAATATGAACCGAACGACTCAAGAAACCCTATCAATTTTCCTCGCGCGAAGAAATGGACG ATAACTTTTGTCGCATCTGCTTCCACTTTGTTCACTTCCGCTACAGCGGCATCATACGCCTTAGGTTTCCCTTCA ATGACACGCGATCTCTCTGCTACCCAGTTTCAAGCAACAGTCGGGCTCAGCATGTACACTCTAGGGTTTGGTGTA GTGCCATTGGTCACTGCATCGTTCTCTGAGGAGTTTGGTCGACGGCCACTATATCTCGTCTCCGGACTCGGATTC GCAATTTTCTATGTCATGATTGCTGAAGCAAAAAACATTCAAACCGTCATGGTGGCAAGACTCATACAAGGTTCA TTTGGCTCTACAGCGGCGACGATGGTTGGTGGTACAATTGCAGACATTTGGGCACCTGCCGAGCGTGGTCTACCT ATGGCTATCTTTTCGCTAAGTGCTCTATGCGGGAACGGTTATGGTCCTCTAATAGCGGGTTGGATCGAAATGAAT TCACGACTTGGTTGGCGTTGGATACAATGGATTCAGCTCATCATTTTCGCTGTTACTCTCTTATTAGTCTTTATA TTCCTTGAAGAGACCCGTTCTACTGTGCTCTTGATGCGTATAGCGAAGAAATTGAGAGAAGAGACAGGTCGAAGT TACAAGGCGAGAATAGAAGATGAGAGTGTGAGTTTGAAACATCTCATTTGGATTTCTTGTACACGACCCATTCGT CTATTACTTACGGAACATGTCGTCCTAAGTTTTAGCTTATGGATTGGTTTCGCTTGGGGTGTGACATATTGCATG ATTCAATCTATTGGAATGGTTTTTCGGACTTTGCACGACTTTAATGACGGACAGGTTGGCCTAGTATTCATAAGT ATGCTTGTGGGCTCTTTCATTGGATTTTTCTCGAATTTCTACCAAGAATACTTATACAAAATGTATTATCCAACG AGAGGCCCAGAAGCACGTCTCTATTGTGCTTGTGTAGCAGCATTTTTCTTGCCGATAGCGATGTTCATATATGCC TGGTGTTCATTCTCACATGTTCATTGGATAGGTTTGGTCGTTGGTATCACATTATTCGTGGCTGCTATGTTTGTT GTGTACCTTGCAGTTTTCTCATATCTCGCCGATTGTTATGGTCCCTATGCATCATCCGCTCTTGCAGGTCAAAGT CTTGCTCGTAACATAATGGCAACAGTTTTTCCTCTATTCACAACTCAAATGTATACCAACCTAACATTCAAATGG GCAAATACCTTGTTCGGATTTTTAGCTTTGGCTATGATACCTATTCCATTTGTATTGTTTTTTTATGGACCTAGT ATTCGACAAAGGAGTAAATTTTCGCGGAGGGTGTTGGAGGCGCAACAAAAAGCTTCTTTAGAGAAAATGTAG |
Gene | >AgabiH97|019690 ATGAAGTTCGGTCAAAGCTATTTCTCTTATTTTCATGCTCATCCGGAGCCATCAAAGGATACCCATACCCCAGAC CTAGAGAAGGATTCAACTTCAAAACTCACTCCTCTTGAACCGAAGGAAAATTCTCTGGATACGATAGCTCCTGAA GAAACCATTTATGTGGGTGACAATGCTACTCTGCGACTGTATGATATAACTTTTATTACAGGTTGAATATGAACC GAACGACTCAAGAAACCCTATCAATTTTCCTCGCGCGAAGAAATGGACGATAACTTTTGTCGCATCTGCTTCCAC TTTGTTCACTTGTGCGCTACTTTCAATATTACACTGAGGTCTCGCCGTATAACCTCGTTTTTTGTTTTGATTTGG TAGCCGCTACAGCGGCATCATACGCCTTAGGTTTCCCTTCAATGACACGCGATCTCTCTGCTACCCAGTTTCAAG CAACAGTCGGGCTCAGCATGTACACTCTAGGGTTTGGTGTAGTGCCATTGGTCACTGCATCGTTCTCTGAGGAGT TTGGTCGACGGCCACTATATCTCGTCTCCGGACTCGGATTCGCAATTTTCTATGTCATGATTGCTGAGTATGTCA TCAATTTACTGCTTATTCTTTTTACCGAACGTGTCTTATTAATCTCTCCTAGAGCAAAAAACATTCAAACCGTCA TGGTGGCAAGACTCATACAAGGTTCATTTGGCTCTACAGCGGCGACGATGGTTGGTGGTACAATTGCAGACATTT GGGCACCTGCCGAGTACGTTACATATCCGTTTCTCTGATCATATCTAACAACCTTGACAGGCGTGGTCTACCTAT GGCTATCTTTTCGCTAAGTGCTCTATGCGGGAACGGTTATGGTCCTCTAATAGCGGGTTGGATCGAAATGAATTC ACGACTTGGTTGGCGTTGGATACAATGGATTCAGCTCATGTACGTGAAACTCTTTTCCTTACACCCACGTACATT CTCAGCCTAATCAATAAAAATCATAACAGCATTTTCGCTGTTACTCTCTTATTAGTCTTTATATTCCTTGAAGAG ACCCGTTCTACTGTGCTCTTGATGCGTATAGCGAAGAAATTGAGAGAAGAGACAGGTCGAAGTTACAAGGCGAGA ATAGAAGATGAGAGTGTGAGTTTGAAACATCTCATTTGGATTTCTTGTACACGACCCATTCGTAAGTTCTATTTC TTCTTTTTTATGATGTAACCTGACACATCGGGTTCTTCAAGGTCTATTACTTACGGAACATGTCGTCCTAAGTTT TAGCGTAAGTCCCAGCTACACCCTACCTATGCACATGCTCGAAATCTAATCTATACCCACTCCAGTTATGGATTG GTTTCGCTTGGGGTGTGACATATTGCATGATTCAGTATGTTGCATTTAACTCTCAGATTTTCATTGTTCGAAATG CTGAAAAAAATCTTGACTAATTTAGATCTATTGGAATGGTTTTTCGGACTTTGCACGACTTTAATGACGGACAGG TTGGCCTAGTATTCATAAGTATGCTGTAAGTCTACCATGAATTTCCTTCCTACAAAATTCGAGAACTCACAAAAA CGTCTCAGTGTGGGCTCTTTCATTGGATTTTTCTCGAATTTCTACCAAGAATACTTATACAAGTACGGCAGACAC TCTTCTCATCCCCCCCCGGAAAACGCTCACATAAATCATCGATAACAGAATGTATTATCCAACGAGAGGCCCAGA AGCACGTCTCTATTGTGCTTGTGTAGCAGCATTTTTCTTGCCGATAGCGATGTTCATATATGCCTGGTGTTCATT CTCACATGTTCATTGGATAGGTTTGGTCGTTGGTATCACAGTACGTACAAGTGGTCATCTCTTTTTTTCGATATA TATGTATACTTATTCTTTTTCAGTTATTCGTGGCTGCTATGTTTGTTGTGTACCTTGCAGTTTTCTCATATCTCG CCGATTGGTAACGTATTTCTTTAAATTCCCAAGGAAAACTTCGTACTCACATACCTACTTTTCAAAGTTATGGTC CCTATGCATCATCCGCTCTTGCAGGTCAAAGTCTTGCTCGTACGTATCTACCATTCTCAACATACCCCTGACACA AGCGTAACTTTTTTTCTAATAAAAACAGGTAACATAATGGCAACAGTTTTTCCTCTATTCACAACTCAAATGTAT ACCAACCTAACATTCAAATGGGCAAATACCTTGTTCGGATTTTTAGCTTTGGCTATGATACCTATTCCATTTGTA AGTCGTTCGTTTCGTTTTCGTTTTCGTTAACTCGTGTTTTTTTTTAATGAATATATATCGAATGTGTTGTAGGTA TTGTTTTTTTATGGACCTAGTATTCGACAAAGGAGTAAATTTTCGCGGAGGGTGTTGGAGGCGCAACAAAAAGCT TCTTTAGAGAAAATGTAG |