© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|017900 |
| Gene name | |
| Location | scaffold_10:796544..798030 |
| Strand | + |
| Gene length (bp) | 1486 |
| Transcript length (bp) | 1119 |
| Coding sequence length (bp) | 1119 |
| Protein length (aa) | 373 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | 0.0959 | 0.057 | 0.88 | 0.3177 | 0.0798 | 0.0034 | 0.4083 | 0.1738 | 0.2719 | 0.0045 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 21 | 0.999777 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Casing | Casing mycelium | 572.28 | 274.63 | 869.94 |
| Initials | Initials knots | 361.05 | 202.26 | 519.85 |
| Pileal_Stipeal_center | Stage I stipe center | 844.19 | 414.48 | 1273.90 |
| Pileal_Stipeal_shell | Stage I stipe shell | 685.59 | 349.24 | 1021.95 |
| DIF_stipe_center | Stage II stipe center | 966.34 | 458.53 | 1474.15 |
| DIF_stipe_shell | Stage II stipe shell | 1085.00 | 499.05 | 1670.94 |
| DIF_stipe_skin | Stage II stipe skin | 941.16 | 449.71 | 1432.60 |
| DIF_cap_skin | Stage II cap skin | 1027.44 | 478.89 | 1575.99 |
| DIF_cap_tissue | Stage II cap tissue | 1076.90 | 485.17 | 1668.64 |
| DIF_gill_tissue | Stage II gill tissue | 796.53 | 394.19 | 1198.86 |
| YFB_stipe_center | Young fruiting body stipe center | 1318.68 | 561.58 | 2075.79 |
| YFB_stipe_shell | Young fruiting body stipe shell | 1185.01 | 532.59 | 1837.43 |
| YFB_stipe_skin | Young fruiting body stipe skin | 1015.65 | 475.19 | 1556.11 |
| YFB_cap_skin | Young fruiting body cap skin | 1345.63 | 578.87 | 2112.39 |
| YFB_cap_tissue | Young fruiting body cap tissue | 2046.25 | 725.95 | 3366.56 |
| YFB_gill_tissue | Young fruiting body gill tissue | 886.34 | 421.26 | 1351.41 |
| YFB_veil | Young fruiting body veil | 939.60 | 445.94 | 1433.26 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Casing | DIF_gill_tissue | 0.456197 | no |
| Casing | YFB_stipe_center | 0.017783 | yes |
| Casing | YFB_stipe_shell | 0.043983 | yes |
| Casing | YFB_stipe_skin | 0.118854 | no |
| Casing | YFB_cap_skin | 0.016386 | yes |
| Casing | YFB_cap_tissue | 0.000613 | yes |
| Casing | YFB_gill_tissue | 0.276237 | no |
| Casing | YFB_veil | 0.202200 | no |
| Casing | Initials | 0.203521 | no |
| Casing | Pileal_Stipeal_center | 0.350240 | no |
| Casing | Pileal_Stipeal_shell | 0.733529 | no |
| Casing | DIF_stipe_center | 0.167625 | no |
| Casing | DIF_stipe_shell | 0.087927 | no |
| Casing | DIF_stipe_skin | 0.201511 | no |
| Casing | DIF_cap_skin | 0.107767 | no |
| Casing | DIF_cap_tissue | 0.085045 | no |
| DIF_gill_tissue | YFB_stipe_center | 0.192285 | no |
| DIF_gill_tissue | YFB_stipe_shell | 0.333527 | no |
| DIF_gill_tissue | YFB_stipe_skin | 0.614276 | no |
| DIF_gill_tissue | YFB_cap_skin | 0.181690 | no |
| DIF_gill_tissue | YFB_cap_tissue | 0.015242 | yes |
| DIF_gill_tissue | YFB_gill_tissue | 0.861007 | no |
| DIF_gill_tissue | YFB_veil | 0.764468 | no |
| YFB_stipe_center | YFB_stipe_shell | 0.868800 | no |
| YFB_stipe_center | YFB_stipe_skin | 0.594495 | no |
| YFB_stipe_center | YFB_cap_skin | 0.979289 | no |
| YFB_stipe_center | YFB_cap_tissue | 0.367324 | no |
| YFB_stipe_center | YFB_gill_tissue | 0.352859 | no |
| YFB_stipe_center | YFB_veil | 0.459266 | no |
| YFB_stipe_shell | YFB_stipe_skin | 0.788023 | no |
| YFB_stipe_shell | YFB_cap_skin | 0.847394 | no |
| YFB_stipe_shell | YFB_cap_tissue | 0.218316 | no |
| YFB_stipe_shell | YFB_gill_tissue | 0.536250 | no |
| YFB_stipe_shell | YFB_veil | 0.651813 | no |
| YFB_stipe_skin | YFB_cap_skin | 0.568000 | no |
| YFB_stipe_skin | YFB_cap_tissue | 0.087755 | no |
| YFB_stipe_skin | YFB_gill_tissue | 0.816081 | no |
| YFB_stipe_skin | YFB_veil | 0.906383 | no |
| YFB_cap_skin | YFB_cap_tissue | 0.401250 | no |
| YFB_cap_skin | YFB_gill_tissue | 0.325159 | no |
| YFB_cap_skin | YFB_veil | 0.428232 | no |
| YFB_cap_tissue | YFB_gill_tissue | 0.035309 | yes |
| YFB_cap_tissue | YFB_veil | 0.051723 | no |
| YFB_gill_tissue | YFB_veil | 0.932928 | no |
| Initials | DIF_gill_tissue | 0.012274 | yes |
| Initials | YFB_stipe_center | 0.000613 | yes |
| Initials | YFB_stipe_shell | 0.000613 | yes |
| Initials | YFB_stipe_skin | 0.001140 | yes |
| Initials | YFB_cap_skin | 0.000613 | yes |
| Initials | YFB_cap_tissue | 0.000613 | yes |
| Initials | YFB_gill_tissue | 0.002525 | yes |
| Initials | YFB_veil | 0.002084 | yes |
| Initials | Pileal_Stipeal_center | 0.008791 | yes |
| Initials | Pileal_Stipeal_shell | 0.037593 | yes |
| Initials | DIF_stipe_center | 0.001625 | yes |
| Initials | DIF_stipe_shell | 0.000613 | yes |
| Initials | DIF_stipe_skin | 0.001140 | yes |
| Initials | DIF_cap_skin | 0.000613 | yes |
| Initials | DIF_cap_tissue | 0.001140 | yes |
| Pileal_Stipeal_center | DIF_gill_tissue | 0.930669 | no |
| Pileal_Stipeal_center | YFB_stipe_center | 0.266138 | no |
| Pileal_Stipeal_center | YFB_stipe_shell | 0.434709 | no |
| Pileal_Stipeal_center | YFB_stipe_skin | 0.723016 | no |
| Pileal_Stipeal_center | YFB_cap_skin | 0.252194 | no |
| Pileal_Stipeal_center | YFB_cap_tissue | 0.025711 | yes |
| Pileal_Stipeal_center | YFB_gill_tissue | 0.943502 | no |
| Pileal_Stipeal_center | YFB_veil | 0.863102 | no |
| Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.669737 | no |
| Pileal_Stipeal_center | DIF_stipe_center | 0.819195 | no |
| Pileal_Stipeal_center | DIF_stipe_shell | 0.611662 | no |
| Pileal_Stipeal_center | DIF_stipe_skin | 0.861706 | no |
| Pileal_Stipeal_center | DIF_cap_skin | 0.702222 | no |
| Pileal_Stipeal_center | DIF_cap_tissue | 0.622566 | no |
| Pileal_Stipeal_shell | DIF_gill_tissue | 0.785110 | no |
| Pileal_Stipeal_shell | YFB_stipe_center | 0.066022 | no |
| Pileal_Stipeal_shell | YFB_stipe_shell | 0.133428 | no |
| Pileal_Stipeal_shell | YFB_stipe_skin | 0.316421 | no |
| Pileal_Stipeal_shell | YFB_cap_skin | 0.065649 | no |
| Pileal_Stipeal_shell | YFB_cap_tissue | 0.005302 | yes |
| Pileal_Stipeal_shell | YFB_gill_tissue | 0.576815 | no |
| Pileal_Stipeal_shell | YFB_veil | 0.464847 | no |
| Pileal_Stipeal_shell | DIF_stipe_center | 0.413645 | no |
| Pileal_Stipeal_shell | DIF_stipe_shell | 0.239533 | no |
| Pileal_Stipeal_shell | DIF_stipe_skin | 0.465177 | no |
| Pileal_Stipeal_shell | DIF_cap_skin | 0.304013 | no |
| Pileal_Stipeal_shell | DIF_cap_tissue | 0.248439 | no |
| DIF_stipe_center | DIF_gill_tissue | 0.714955 | no |
| DIF_stipe_center | YFB_stipe_center | 0.512033 | no |
| DIF_stipe_center | YFB_stipe_shell | 0.697264 | no |
| DIF_stipe_center | YFB_stipe_skin | 0.941985 | no |
| DIF_stipe_center | YFB_cap_skin | 0.483886 | no |
| DIF_stipe_center | YFB_cap_tissue | 0.062807 | no |
| DIF_stipe_center | YFB_gill_tissue | 0.893034 | no |
| DIF_stipe_center | YFB_veil | 0.968507 | no |
| DIF_stipe_center | DIF_stipe_shell | 0.855109 | no |
| DIF_stipe_center | DIF_stipe_skin | 0.970626 | no |
| DIF_stipe_center | DIF_cap_skin | 0.926864 | no |
| DIF_stipe_center | DIF_cap_tissue | 0.866152 | no |
| DIF_stipe_shell | DIF_gill_tissue | 0.507546 | no |
| DIF_stipe_shell | YFB_stipe_center | 0.732410 | no |
| DIF_stipe_shell | YFB_stipe_shell | 0.898925 | no |
| DIF_stipe_shell | YFB_stipe_skin | 0.924604 | no |
| DIF_stipe_shell | YFB_cap_skin | 0.704100 | no |
| DIF_stipe_shell | YFB_cap_tissue | 0.142370 | no |
| DIF_stipe_shell | YFB_gill_tissue | 0.708192 | no |
| DIF_stipe_shell | YFB_veil | 0.812859 | no |
| DIF_stipe_shell | DIF_stipe_skin | 0.818139 | no |
| DIF_stipe_shell | DIF_cap_skin | 0.938557 | no |
| DIF_stipe_shell | DIF_cap_tissue | 0.991610 | no |
| DIF_stipe_skin | DIF_gill_tissue | 0.767201 | no |
| DIF_stipe_skin | YFB_stipe_center | 0.460991 | no |
| DIF_stipe_skin | YFB_stipe_shell | 0.650805 | no |
| DIF_stipe_skin | YFB_stipe_skin | 0.908651 | no |
| DIF_stipe_skin | YFB_cap_skin | 0.433061 | no |
| DIF_stipe_skin | YFB_cap_tissue | 0.050294 | no |
| DIF_stipe_skin | YFB_gill_tissue | 0.931053 | no |
| DIF_stipe_skin | YFB_veil | 0.997655 | no |
| DIF_stipe_skin | DIF_cap_skin | 0.892176 | no |
| DIF_stipe_skin | DIF_cap_tissue | 0.827234 | no |
| DIF_cap_skin | DIF_gill_tissue | 0.599026 | no |
| DIF_cap_skin | YFB_stipe_center | 0.624262 | no |
| DIF_cap_skin | YFB_stipe_shell | 0.805507 | no |
| DIF_cap_skin | YFB_stipe_skin | 0.986192 | no |
| DIF_cap_skin | YFB_cap_skin | 0.593498 | no |
| DIF_cap_skin | YFB_cap_tissue | 0.097776 | no |
| DIF_cap_skin | YFB_gill_tissue | 0.795974 | no |
| DIF_cap_skin | YFB_veil | 0.889360 | no |
| DIF_cap_skin | DIF_cap_tissue | 0.947002 | no |
| DIF_cap_tissue | DIF_gill_tissue | 0.517197 | no |
| DIF_cap_tissue | YFB_stipe_center | 0.716320 | no |
| DIF_cap_tissue | YFB_stipe_shell | 0.881271 | no |
| DIF_cap_tissue | YFB_stipe_skin | 0.930360 | no |
| DIF_cap_tissue | YFB_cap_skin | 0.687789 | no |
| DIF_cap_tissue | YFB_cap_tissue | 0.128955 | no |
| DIF_cap_tissue | YFB_gill_tissue | 0.720461 | no |
| DIF_cap_tissue | YFB_veil | 0.819534 | no |
| Orthofinder run ID | 1 |
| Orthogroup | 3408 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Agaricus bisporus var bisporus H39 | AgabiH39|017900 |
| Agaricus bisporus var bisporus H97 | AgabiH97|017900 (this protein) |
| Rhodonia placenta FPRL280 | RhoplFPRL280|16_12 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|017900 MPAKFVLASLLLASLSSVVSAASSCIASDIHWNLLAFGFNGKDYDAGTQDSWTQGNATDITTTQGRPPFDGSNVT CYLSQFTNAIYFMGADASKPNDIHIYDATAKSWSTQAVQQNSFDPTSSGAILDHDTNVFYAYSGGDIYSLDMELL KAANSTPKAWNDVQKVDWDTSSYQPTVALGQNHIFFLGVPGVNPGSTRIFVIHFSYLQPEPQAFGDIPNMHGKTA SIFKDEGVQTQFIYVPDDGSATYLLDVTSNTTQTLKAPMNKDAQATYFATTTAVIQLSSSGSVSYLPIDATNEGA NSNSNWATVSNLPVATPAKPSSASGSASGTGSAGAQSTGSTSDGTMDNGAAVLNVGRWVWSAVALMVGAALF* |
| Coding | >AgabiH97|017900 ATGCCTGCAAAATTCGTCCTTGCTTCCCTCCTTCTTGCCTCGCTCTCTTCTGTAGTATCGGCCGCCTCCTCCTGC ATCGCATCCGACATCCACTGGAACCTTCTCGCCTTCGGTTTCAATGGCAAGGACTATGACGCTGGCACCCAGGAT TCCTGGACTCAAGGGAATGCCACGGATATAACAACAACTCAAGGCCGACCCCCTTTCGATGGCTCAAACGTCACC TGCTATCTGTCACAATTCACAAATGCAATTTATTTCATGGGGGCCGACGCTTCTAAACCTAACGACATCCACATC TATGATGCCACTGCGAAATCTTGGTCCACCCAAGCTGTACAGCAGAACTCTTTTGATCCAACTAGTTCTGGCGCT ATCCTTGACCATGACACCAACGTATTCTACGCGTATTCCGGGGGAGACATCTATTCTCTTGATATGGAGCTCCTC AAGGCAGCTAACAGTACCCCAAAGGCGTGGAATGACGTCCAGAAAGTCGATTGGGATACCTCCAGTTATCAACCC ACTGTGGCATTGGGCCAGAACCACATCTTTTTCCTAGGAGTTCCGGGAGTAAACCCTGGAAGTACCAGAATTTTT GTTATCCACTTCTCATACTTGCAGCCCGAACCCCAAGCTTTCGGAGACATCCCAAACATGCATGGTAAAACTGCT TCTATTTTCAAAGACGAAGGTGTTCAAACCCAATTCATCTATGTCCCTGATGATGGCTCAGCTACTTATCTGCTT GACGTCACGAGCAACACCACACAGACATTGAAAGCTCCCATGAACAAGGATGCCCAGGCGACTTATTTTGCCACA ACGACTGCTGTCATCCAACTTTCGTCGTCTGGCTCTGTTTCTTATCTTCCAATCGATGCGACCAACGAGGGTGCC AATTCTAATTCCAACTGGGCGACTGTCAGTAATTTGCCGGTGGCGACTCCAGCCAAGCCGTCTTCTGCTTCTGGT TCTGCTTCGGGCACCGGAAGTGCCGGAGCTCAAAGTACTGGCTCGACTTCAGATGGTACGATGGACAATGGTGCT GCAGTTCTGAATGTTGGACGTTGGGTGTGGAGTGCCGTTGCACTCATGGTCGGAGCAGCGCTCTTCTAA |
| Transcript | >AgabiH97|017900 ATGCCTGCAAAATTCGTCCTTGCTTCCCTCCTTCTTGCCTCGCTCTCTTCTGTAGTATCGGCCGCCTCCTCCTGC ATCGCATCCGACATCCACTGGAACCTTCTCGCCTTCGGTTTCAATGGCAAGGACTATGACGCTGGCACCCAGGAT TCCTGGACTCAAGGGAATGCCACGGATATAACAACAACTCAAGGCCGACCCCCTTTCGATGGCTCAAACGTCACC TGCTATCTGTCACAATTCACAAATGCAATTTATTTCATGGGGGCCGACGCTTCTAAACCTAACGACATCCACATC TATGATGCCACTGCGAAATCTTGGTCCACCCAAGCTGTACAGCAGAACTCTTTTGATCCAACTAGTTCTGGCGCT ATCCTTGACCATGACACCAACGTATTCTACGCGTATTCCGGGGGAGACATCTATTCTCTTGATATGGAGCTCCTC AAGGCAGCTAACAGTACCCCAAAGGCGTGGAATGACGTCCAGAAAGTCGATTGGGATACCTCCAGTTATCAACCC ACTGTGGCATTGGGCCAGAACCACATCTTTTTCCTAGGAGTTCCGGGAGTAAACCCTGGAAGTACCAGAATTTTT GTTATCCACTTCTCATACTTGCAGCCCGAACCCCAAGCTTTCGGAGACATCCCAAACATGCATGGTAAAACTGCT TCTATTTTCAAAGACGAAGGTGTTCAAACCCAATTCATCTATGTCCCTGATGATGGCTCAGCTACTTATCTGCTT GACGTCACGAGCAACACCACACAGACATTGAAAGCTCCCATGAACAAGGATGCCCAGGCGACTTATTTTGCCACA ACGACTGCTGTCATCCAACTTTCGTCGTCTGGCTCTGTTTCTTATCTTCCAATCGATGCGACCAACGAGGGTGCC AATTCTAATTCCAACTGGGCGACTGTCAGTAATTTGCCGGTGGCGACTCCAGCCAAGCCGTCTTCTGCTTCTGGT TCTGCTTCGGGCACCGGAAGTGCCGGAGCTCAAAGTACTGGCTCGACTTCAGATGGTACGATGGACAATGGTGCT GCAGTTCTGAATGTTGGACGTTGGGTGTGGAGTGCCGTTGCACTCATGGTCGGAGCAGCGCTCTTCTAA |
| Gene | >AgabiH97|017900 ATGCCTGCAAAATTCGTCCTTGCTTCCCTCCTTCTTGCCTCGCTCTCTTCTGTAGTATCGGCCGCCTCCTCCTGC ATCGCATCCGACATCCACTGGAACCTTCTCGCCTTCGGTTTCAATGGCAAGGACTATGACGCTGGCACCCAGGAT TCCTGGACTCAAGGTAAGCAATATATGTTCTCTCATATCTCTTTTTCCATGTGTTAAAAATTTTCTCAGGGAATG CCACGGATATAACAACAACTCAAGGCCGACCGTAAGTCACCACCAAATATCTGTCCATCCCACCAACGTCAAACC CATTTTAGCCCTTTCGATGGCTCAAACGTCACCTGCTATCTGTCACAAGTCAGCCCACCTATATTTTCATAATCC GAATGCTGACATTAGCACCGGCAGTTCACAAATGCAATTTATTTCATGGGGGCCGACGCTTCTAAACCTAACGAC ATCCACATCTATGATGCCACTGCGAAATCTTGGTCCACCCAAGCTGTACAGCAGAACTCTTTTGATCCAACTAGT TCTGGCGCTATCCTTGACCATGACACCAACGTATTCTGTACGTAGTCTTTTCTCAATTTTATGAACTTGCTTAAT TCGAAATTCAGACGCGTATTCCGGGGGAGACATCTATTCTCTTGATATGGAGCTCCTCAAGGCAGCTAACAGTAC CCCAAAGGCGTGGAATGACGTCCAGAAAGTCGATTGGGATACCTCCAGTTATCAACCCACTGTGGCATTGGGCCA GAACCACATCTTTTTCCTAGGAGTTCCGGGAGTAAACCCTGGAAGTACCAGAATTTTTGTTATCCACTGTGTGTT TCTTTGGTTAGGTGACTGTGACCTTCGATAATCTGATTGTTCTCCTAGTCTCATACTTGCAGCCCGAACCCCAAG CTTTCGGAGACATCCCAAACATGCATGGTAAAACTGCTTCTATTTTCAAAGACGAAGGTGTCAGTGGCAAACTAG TTATTTCACTCACGTAGTTTCTGATCGATTACCAGGTTCAAACCCAATTCATCTATGTCCCTGATGATGGCTCAG CTACTTATCTGCTTGACGTCACGGTATGATGGTTCCACCCCGCACTGGCAAAGTGAATTAATCACCGCCTCCGCA GAGCAACACCACACAGACATTGAAAGCTCCCATGAACAAGGATGCCCAGGCGACTTATTTTGCCACAACGACTGC TGTCATCCAACTTTCGTCGTCTGGCTCTGTTTCTTATCTTCCAATCGATGCGACCAACGAGGGTGCCAATTCTAA TTCCAACTGGGCGACTGTCAGTAATTTGCCGGTGGCGACTCCAGCCAAGCCGTCTTCTGCTTCTGGTTCTGCTTC GGGCACCGGAAGTGCCGGAGCTCAAAGTACTGGCTCGACTTCAGATGGTACGATGGACAATGGTGCTGCAGTTCT GAATGTTGGACGTTGGGTGTGGAGTGCCGTTGCACTCATGGTCGGAGCAGCGCTCTTCTAA |