Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|017900
Gene name
Location	scaffold_10:796544..798030
Strand	+
Gene length (bp)	1486
Transcript length (bp)	1119
Coding sequence length (bp)	1119
Protein length (aa)	373

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 22	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|017900 MPAKFVLASLLLASLSSVVSAASSCIASDIHWNLLAFGFNGKDYDAGTQDSWTQGNATDITTTQGRPPFDGSNVT CYLSQFTNAIYFMGADASKPNDIHIYDATAKSWSTQAVQQNSFDPTSSGAILDHDTNVFYAYSGGDIYSLDMELL KAANSTPKAWNDVQKVDWDTSSYQPTVALGQNHIFFLGVPGVNPGSTRIFVIHFSYLQPEPQAFGDIPNMHGKTA SIFKDEGVQTQFIYVPDDGSATYLLDVTSNTTQTLKAPMNKDAQATYFATTTAVIQLSSSGSVSYLPIDATNEGA NSNSNWATVSNLPVATPAKPSSASGSASGTGSAGAQSTGSTSDGTMDNGAAVLNVGRWVWSAVALMVGAALF*
Coding	>AgabiH97\|017900 ATGCCTGCAAAATTCGTCCTTGCTTCCCTCCTTCTTGCCTCGCTCTCTTCTGTAGTATCGGCCGCCTCCTCCTGC ATCGCATCCGACATCCACTGGAACCTTCTCGCCTTCGGTTTCAATGGCAAGGACTATGACGCTGGCACCCAGGAT TCCTGGACTCAAGGGAATGCCACGGATATAACAACAACTCAAGGCCGACCCCCTTTCGATGGCTCAAACGTCACC TGCTATCTGTCACAATTCACAAATGCAATTTATTTCATGGGGGCCGACGCTTCTAAACCTAACGACATCCACATC TATGATGCCACTGCGAAATCTTGGTCCACCCAAGCTGTACAGCAGAACTCTTTTGATCCAACTAGTTCTGGCGCT ATCCTTGACCATGACACCAACGTATTCTACGCGTATTCCGGGGGAGACATCTATTCTCTTGATATGGAGCTCCTC AAGGCAGCTAACAGTACCCCAAAGGCGTGGAATGACGTCCAGAAAGTCGATTGGGATACCTCCAGTTATCAACCC ACTGTGGCATTGGGCCAGAACCACATCTTTTTCCTAGGAGTTCCGGGAGTAAACCCTGGAAGTACCAGAATTTTT GTTATCCACTTCTCATACTTGCAGCCCGAACCCCAAGCTTTCGGAGACATCCCAAACATGCATGGTAAAACTGCT TCTATTTTCAAAGACGAAGGTGTTCAAACCCAATTCATCTATGTCCCTGATGATGGCTCAGCTACTTATCTGCTT GACGTCACGAGCAACACCACACAGACATTGAAAGCTCCCATGAACAAGGATGCCCAGGCGACTTATTTTGCCACA ACGACTGCTGTCATCCAACTTTCGTCGTCTGGCTCTGTTTCTTATCTTCCAATCGATGCGACCAACGAGGGTGCC AATTCTAATTCCAACTGGGCGACTGTCAGTAATTTGCCGGTGGCGACTCCAGCCAAGCCGTCTTCTGCTTCTGGT TCTGCTTCGGGCACCGGAAGTGCCGGAGCTCAAAGTACTGGCTCGACTTCAGATGGTACGATGGACAATGGTGCT GCAGTTCTGAATGTTGGACGTTGGGTGTGGAGTGCCGTTGCACTCATGGTCGGAGCAGCGCTCTTCTAA
Transcript	>AgabiH97\|017900 ATGCCTGCAAAATTCGTCCTTGCTTCCCTCCTTCTTGCCTCGCTCTCTTCTGTAGTATCGGCCGCCTCCTCCTGC ATCGCATCCGACATCCACTGGAACCTTCTCGCCTTCGGTTTCAATGGCAAGGACTATGACGCTGGCACCCAGGAT TCCTGGACTCAAGGGAATGCCACGGATATAACAACAACTCAAGGCCGACCCCCTTTCGATGGCTCAAACGTCACC TGCTATCTGTCACAATTCACAAATGCAATTTATTTCATGGGGGCCGACGCTTCTAAACCTAACGACATCCACATC TATGATGCCACTGCGAAATCTTGGTCCACCCAAGCTGTACAGCAGAACTCTTTTGATCCAACTAGTTCTGGCGCT ATCCTTGACCATGACACCAACGTATTCTACGCGTATTCCGGGGGAGACATCTATTCTCTTGATATGGAGCTCCTC AAGGCAGCTAACAGTACCCCAAAGGCGTGGAATGACGTCCAGAAAGTCGATTGGGATACCTCCAGTTATCAACCC ACTGTGGCATTGGGCCAGAACCACATCTTTTTCCTAGGAGTTCCGGGAGTAAACCCTGGAAGTACCAGAATTTTT GTTATCCACTTCTCATACTTGCAGCCCGAACCCCAAGCTTTCGGAGACATCCCAAACATGCATGGTAAAACTGCT TCTATTTTCAAAGACGAAGGTGTTCAAACCCAATTCATCTATGTCCCTGATGATGGCTCAGCTACTTATCTGCTT GACGTCACGAGCAACACCACACAGACATTGAAAGCTCCCATGAACAAGGATGCCCAGGCGACTTATTTTGCCACA ACGACTGCTGTCATCCAACTTTCGTCGTCTGGCTCTGTTTCTTATCTTCCAATCGATGCGACCAACGAGGGTGCC AATTCTAATTCCAACTGGGCGACTGTCAGTAATTTGCCGGTGGCGACTCCAGCCAAGCCGTCTTCTGCTTCTGGT TCTGCTTCGGGCACCGGAAGTGCCGGAGCTCAAAGTACTGGCTCGACTTCAGATGGTACGATGGACAATGGTGCT GCAGTTCTGAATGTTGGACGTTGGGTGTGGAGTGCCGTTGCACTCATGGTCGGAGCAGCGCTCTTCTAA
Gene	>AgabiH97\|017900 ATGCCTGCAAAATTCGTCCTTGCTTCCCTCCTTCTTGCCTCGCTCTCTTCTGTAGTATCGGCCGCCTCCTCCTGC ATCGCATCCGACATCCACTGGAACCTTCTCGCCTTCGGTTTCAATGGCAAGGACTATGACGCTGGCACCCAGGAT TCCTGGACTCAAGGTAAGCAATATATGTTCTCTCATATCTCTTTTTCCATGTGTTAAAAATTTTCTCAGGGAATG CCACGGATATAACAACAACTCAAGGCCGACCGTAAGTCACCACCAAATATCTGTCCATCCCACCAACGTCAAACC CATTTTAGCCCTTTCGATGGCTCAAACGTCACCTGCTATCTGTCACAAGTCAGCCCACCTATATTTTCATAATCC GAATGCTGACATTAGCACCGGCAGTTCACAAATGCAATTTATTTCATGGGGGCCGACGCTTCTAAACCTAACGAC ATCCACATCTATGATGCCACTGCGAAATCTTGGTCCACCCAAGCTGTACAGCAGAACTCTTTTGATCCAACTAGT TCTGGCGCTATCCTTGACCATGACACCAACGTATTCTGTACGTAGTCTTTTCTCAATTTTATGAACTTGCTTAAT TCGAAATTCAGACGCGTATTCCGGGGGAGACATCTATTCTCTTGATATGGAGCTCCTCAAGGCAGCTAACAGTAC CCCAAAGGCGTGGAATGACGTCCAGAAAGTCGATTGGGATACCTCCAGTTATCAACCCACTGTGGCATTGGGCCA GAACCACATCTTTTTCCTAGGAGTTCCGGGAGTAAACCCTGGAAGTACCAGAATTTTTGTTATCCACTGTGTGTT TCTTTGGTTAGGTGACTGTGACCTTCGATAATCTGATTGTTCTCCTAGTCTCATACTTGCAGCCCGAACCCCAAG CTTTCGGAGACATCCCAAACATGCATGGTAAAACTGCTTCTATTTTCAAAGACGAAGGTGTCAGTGGCAAACTAG TTATTTCACTCACGTAGTTTCTGATCGATTACCAGGTTCAAACCCAATTCATCTATGTCCCTGATGATGGCTCAG CTACTTATCTGCTTGACGTCACGGTATGATGGTTCCACCCCGCACTGGCAAAGTGAATTAATCACCGCCTCCGCA GAGCAACACCACACAGACATTGAAAGCTCCCATGAACAAGGATGCCCAGGCGACTTATTTTGCCACAACGACTGC TGTCATCCAACTTTCGTCGTCTGGCTCTGTTTCTTATCTTCCAATCGATGCGACCAACGAGGGTGCCAATTCTAA TTCCAACTGGGCGACTGTCAGTAATTTGCCGGTGGCGACTCCAGCCAAGCCGTCTTCTGCTTCTGGTTCTGCTTC GGGCACCGGAAGTGCCGGAGCTCAAAGTACTGGCTCGACTTCAGATGGTACGATGGACAATGGTGCTGCAGTTCT GAATGTTGGACGTTGGGTGTGGAGTGCCGTTGCACTCATGGTCGGAGCAGCGCTCTTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail