Protein ID | AgabiH97|017240 |
Gene name | |
Location | scaffold_10:605031..606100 |
Strand | - |
Gene length (bp) | 1069 |
Transcript length (bp) | 903 |
Coding sequence length (bp) | 903 |
Protein length (aa) | 301 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF09451 | ATG27 | Autophagy-related protein 27 | 9.4E-20 | 19 | 244 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 227 | 249 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >AgabiH97|017240 MAVGCSLDFSYSFSNTSHLLSYDLCPLFSQHPSLRHEISEDTLPTRTNYVYEIALGKGIQKDGTLPEDLQCPHDS LVCMRAINTRPNHPSEPPRILQVIPVATRHTKPKFRIAKTTTGTDIQEPHLQLTVQGSEYMGMKQKAVFHIYCDE KLHEASTSGQLDHLYQWKGSHVFSWRSEHGCPKITTHDSKDDSDKTPDSHEEEENETTPPANVHEDEDSIIKTPS QTLIWFISLTASILLAIAFRFVFLKRYKHHILQLIHKLPISRRRHRSGEYDFLLEDIASEESTVYSPGFRKYDAV * |
Coding | >AgabiH97|017240 ATGGCTGTGGGATGTTCTCTCGACTTCAGCTACTCATTTTCCAACACATCTCATCTTCTTTCCTATGACTTGTGC CCACTGTTTTCGCAGCATCCATCGTTGAGACACGAAATCAGTGAAGATACGCTACCGACGCGCACAAATTATGTT TATGAAATAGCTTTGGGGAAGGGTATCCAGAAGGATGGTACCTTACCTGAGGACTTGCAGTGCCCCCATGATTCG CTAGTATGTATGCGAGCCATTAACACTCGACCAAATCATCCTTCGGAGCCGCCAAGAATTCTTCAGGTCATCCCT GTCGCAACCCGTCACACCAAACCAAAGTTTCGTATCGCAAAGACAACTACGGGAACAGATATACAAGAGCCTCAT CTCCAACTCACCGTTCAAGGATCAGAATATATGGGTATGAAGCAAAAAGCTGTATTTCACATTTACTGTGATGAG AAATTACATGAAGCGTCAACTTCAGGGCAGCTCGATCATTTGTACCAATGGAAGGGATCTCATGTTTTCAGCTGG AGATCTGAACATGGTTGCCCAAAAATCACTACTCACGACAGCAAGGACGACTCCGACAAGACGCCAGACAGCCAT GAAGAAGAGGAGAACGAAACCACCCCGCCGGCCAATGTGCATGAAGATGAAGACTCAATCATAAAAACACCATCA CAAACACTCATATGGTTTATCTCATTAACGGCTAGCATTCTTCTCGCCATCGCATTCCGATTTGTCTTTCTCAAA CGATACAAGCATCATATCCTTCAATTGATCCACAAACTCCCTATATCTAGACGTCGTCATCGATCCGGTGAATAC GACTTTCTACTAGAAGATATCGCATCGGAGGAATCCACCGTTTATTCGCCCGGATTTAGAAAATACGACGCAGTA TGA |
Transcript | >AgabiH97|017240 ATGGCTGTGGGATGTTCTCTCGACTTCAGCTACTCATTTTCCAACACATCTCATCTTCTTTCCTATGACTTGTGC CCACTGTTTTCGCAGCATCCATCGTTGAGACACGAAATCAGTGAAGATACGCTACCGACGCGCACAAATTATGTT TATGAAATAGCTTTGGGGAAGGGTATCCAGAAGGATGGTACCTTACCTGAGGACTTGCAGTGCCCCCATGATTCG CTAGTATGTATGCGAGCCATTAACACTCGACCAAATCATCCTTCGGAGCCGCCAAGAATTCTTCAGGTCATCCCT GTCGCAACCCGTCACACCAAACCAAAGTTTCGTATCGCAAAGACAACTACGGGAACAGATATACAAGAGCCTCAT CTCCAACTCACCGTTCAAGGATCAGAATATATGGGTATGAAGCAAAAAGCTGTATTTCACATTTACTGTGATGAG AAATTACATGAAGCGTCAACTTCAGGGCAGCTCGATCATTTGTACCAATGGAAGGGATCTCATGTTTTCAGCTGG AGATCTGAACATGGTTGCCCAAAAATCACTACTCACGACAGCAAGGACGACTCCGACAAGACGCCAGACAGCCAT GAAGAAGAGGAGAACGAAACCACCCCGCCGGCCAATGTGCATGAAGATGAAGACTCAATCATAAAAACACCATCA CAAACACTCATATGGTTTATCTCATTAACGGCTAGCATTCTTCTCGCCATCGCATTCCGATTTGTCTTTCTCAAA CGATACAAGCATCATATCCTTCAATTGATCCACAAACTCCCTATATCTAGACGTCGTCATCGATCCGGTGAATAC GACTTTCTACTAGAAGATATCGCATCGGAGGAATCCACCGTTTATTCGCCCGGATTTAGAAAATACGACGCAGTA TGA |
Gene | >AgabiH97|017240 ATGGCTGTGGGATGTTCTCTCGACTTCAGCTACTCATTTTCCAACACATCTCATCTTCTTTCCTATGACTTGTGC CCACTGTTTTCGCAGCATCCATCGTTGAGACACGAAATCAGTGAAGATACGCTACCGACGCGCACAAATTATGTT TATGAAATAGCTTTGGGGAAGGGTATCCAGAAGGATGGTACCTTACCTGAGGACTTGCAGGTTCGTTTGCCTCAC TTACTGTTACGAATCAGATACTCACAATGTTTGATCAAGTGCCCCCATGATTCGCTAGTATGTATGCGAGCCATT AACACTCGACCAAATCATCCTTCGGAGCCGCCAAGAATTCTTCAGGTCATCCCTGTCGCAACCCGTCACACCAAA CCAAAGTTTCGTATCGCAAAGACAACTACGGGAACAGATATACAAGAGCCTCATCTCCAACTCACCGTTCAAGGA TCAGAATATATGGGTATGAAGCAAAAAGCTGTATTTCACATTTACTGTGATGAGGTGAGACGGCACGTATCCATA ATTTTGATATCAGTTAATTACATATCTCTAGAAATTACATGAAGCGTCAACTTCAGGGCAGCTCGATCATTTGTA CCAATGGAAGGGATCTCATGTTTTCAGCTGGAGATCTGAACATGGTTGCCCAAAAATCACTACTCACGACAGCAA GGACGACTCCGACAAGACGCCAGACAGCCATGAAGAAGAGGAGAACGAAACCACCCCGCCGGCCAATGTGCATGA AGATGAAGACTCAATCATAAAAACACCATCACAAACACTCATATGGTTTATCTCATTAACGGCTAGCATTCTGTT CGTTTTATCTTTCACTATCTCAAAACCGCATCATACCAATCTCAAAACTTTTGACAGTCTCGCCATCGCATTCCG ATTTGTCTTTCTCAAACGATACAAGCATCATATCCTTCAATTGATCCACAAACTCCCTATATCTAGACGTCGTCA TCGATCCGGTGAATACGACTTTCTACTAGAAGATATCGCATCGGAGGAATCCACCGTTTATTCGCCCGGATTTAG AAAATACGACGCAGTATGA |