© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|017000 |
| Gene name | |
| Location | scaffold_10:552237..553538 |
| Strand | - |
| Gene length (bp) | 1301 |
| Transcript length (bp) | 1248 |
| Coding sequence length (bp) | 1248 |
| Protein length (aa) | 416 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07470 | Glyco_hydro_88 | Glycosyl Hydrolase Family 88 | 2.1E-14 | 141 | 258 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 24 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Casing | Casing mycelium | 4.37 | 1.55 | 7.20 |
| Initials | Initials knots | 3.83 | 1.63 | 6.04 |
| Pileal_Stipeal_center | Stage I stipe center | 1.43 | 0.45 | 2.40 |
| Pileal_Stipeal_shell | Stage I stipe shell | 2.81 | 1.09 | 4.53 |
| DIF_stipe_center | Stage II stipe center | 0.69 | 0.15 | 1.24 |
| DIF_stipe_shell | Stage II stipe shell | 0.67 | 0.11 | 1.22 |
| DIF_stipe_skin | Stage II stipe skin | 0.71 | 0.13 | 1.29 |
| DIF_cap_skin | Stage II cap skin | 1.14 | 0.33 | 1.95 |
| DIF_cap_tissue | Stage II cap tissue | 1.85 | 0.62 | 3.08 |
| DIF_gill_tissue | Stage II gill tissue | 2.86 | 1.14 | 4.57 |
| YFB_stipe_center | Young fruiting body stipe center | 0.46 | 0.06 | 0.85 |
| YFB_stipe_shell | Young fruiting body stipe shell | 0.34 | 0.00 | 0.68 |
| YFB_stipe_skin | Young fruiting body stipe skin | 0.61 | 0.11 | 1.11 |
| YFB_cap_skin | Young fruiting body cap skin | 0.73 | 0.14 | 1.33 |
| YFB_cap_tissue | Young fruiting body cap tissue | 0.56 | 0.09 | 1.04 |
| YFB_gill_tissue | Young fruiting body gill tissue | 1.15 | 0.33 | 1.96 |
| YFB_veil | Young fruiting body veil | 1.04 | 0.29 | 1.79 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Casing | DIF_gill_tissue | 0.421233 | no |
| Casing | YFB_stipe_center | 0.000613 | yes |
| Casing | YFB_stipe_shell | 0.000613 | yes |
| Casing | YFB_stipe_skin | 0.000613 | yes |
| Casing | YFB_cap_skin | 0.000613 | yes |
| Casing | YFB_cap_tissue | 0.000613 | yes |
| Casing | YFB_gill_tissue | 0.001625 | yes |
| Casing | YFB_veil | 0.002525 | yes |
| Casing | Initials | 0.861332 | no |
| Casing | Pileal_Stipeal_center | 0.009123 | yes |
| Casing | Pileal_Stipeal_shell | 0.411990 | no |
| Casing | DIF_stipe_center | 0.000613 | yes |
| Casing | DIF_stipe_shell | 0.000613 | yes |
| Casing | DIF_stipe_skin | 0.000613 | yes |
| Casing | DIF_cap_skin | 0.002084 | yes |
| Casing | DIF_cap_tissue | 0.052346 | no |
| DIF_gill_tissue | YFB_stipe_center | 0.002525 | yes |
| DIF_gill_tissue | YFB_stipe_shell | 0.001140 | yes |
| DIF_gill_tissue | YFB_stipe_skin | 0.005302 | yes |
| DIF_gill_tissue | YFB_cap_skin | 0.009123 | yes |
| DIF_gill_tissue | YFB_cap_tissue | 0.003365 | yes |
| DIF_gill_tissue | YFB_gill_tissue | 0.032978 | yes |
| DIF_gill_tissue | YFB_veil | 0.026710 | yes |
| YFB_stipe_center | YFB_stipe_shell | 0.779362 | no |
| YFB_stipe_center | YFB_stipe_skin | 0.755264 | no |
| YFB_stipe_center | YFB_cap_skin | 0.543414 | no |
| YFB_stipe_center | YFB_cap_tissue | 0.838748 | no |
| YFB_stipe_center | YFB_gill_tissue | 0.115496 | no |
| YFB_stipe_center | YFB_veil | 0.184461 | no |
| YFB_stipe_shell | YFB_stipe_skin | 0.460714 | no |
| YFB_stipe_shell | YFB_cap_skin | 0.292427 | no |
| YFB_stipe_shell | YFB_cap_tissue | 0.550636 | no |
| YFB_stipe_shell | YFB_gill_tissue | 0.061662 | no |
| YFB_stipe_shell | YFB_veil | 0.086416 | no |
| YFB_stipe_skin | YFB_cap_skin | 0.854474 | no |
| YFB_stipe_skin | YFB_cap_tissue | 0.940652 | no |
| YFB_stipe_skin | YFB_gill_tissue | 0.288693 | no |
| YFB_stipe_skin | YFB_veil | 0.426049 | no |
| YFB_cap_skin | YFB_cap_tissue | 0.767719 | no |
| YFB_cap_skin | YFB_gill_tissue | 0.504737 | no |
| YFB_cap_skin | YFB_veil | 0.651673 | no |
| YFB_cap_tissue | YFB_gill_tissue | 0.218856 | no |
| YFB_cap_tissue | YFB_veil | 0.332527 | no |
| YFB_gill_tissue | YFB_veil | 0.914224 | no |
| Initials | DIF_gill_tissue | 0.590125 | no |
| Initials | YFB_stipe_center | 0.000613 | yes |
| Initials | YFB_stipe_shell | 0.000613 | yes |
| Initials | YFB_stipe_skin | 0.002084 | yes |
| Initials | YFB_cap_skin | 0.001140 | yes |
| Initials | YFB_cap_tissue | 0.000613 | yes |
| Initials | YFB_gill_tissue | 0.003365 | yes |
| Initials | YFB_veil | 0.004160 | yes |
| Initials | Pileal_Stipeal_center | 0.021056 | yes |
| Initials | Pileal_Stipeal_shell | 0.575268 | no |
| Initials | DIF_stipe_center | 0.001140 | yes |
| Initials | DIF_stipe_shell | 0.001140 | yes |
| Initials | DIF_stipe_skin | 0.000613 | yes |
| Initials | DIF_cap_skin | 0.004928 | yes |
| Initials | DIF_cap_tissue | 0.076984 | no |
| Pileal_Stipeal_center | DIF_gill_tissue | 0.139267 | no |
| Pileal_Stipeal_center | YFB_stipe_center | 0.050499 | no |
| Pileal_Stipeal_center | YFB_stipe_shell | 0.032978 | yes |
| Pileal_Stipeal_center | YFB_stipe_skin | 0.126752 | no |
| Pileal_Stipeal_center | YFB_cap_skin | 0.255805 | no |
| Pileal_Stipeal_center | YFB_cap_tissue | 0.089301 | no |
| Pileal_Stipeal_center | YFB_gill_tissue | 0.775312 | no |
| Pileal_Stipeal_center | YFB_veil | 0.653065 | no |
| Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.162633 | no |
| Pileal_Stipeal_center | DIF_stipe_center | 0.206924 | no |
| Pileal_Stipeal_center | DIF_stipe_shell | 0.198062 | no |
| Pileal_Stipeal_center | DIF_stipe_skin | 0.229919 | no |
| Pileal_Stipeal_center | DIF_cap_skin | 0.764628 | no |
| Pileal_Stipeal_center | DIF_cap_tissue | 0.698780 | no |
| Pileal_Stipeal_shell | DIF_gill_tissue | 0.984144 | no |
| Pileal_Stipeal_shell | YFB_stipe_center | 0.002525 | yes |
| Pileal_Stipeal_shell | YFB_stipe_shell | 0.001625 | yes |
| Pileal_Stipeal_shell | YFB_stipe_skin | 0.006032 | yes |
| Pileal_Stipeal_shell | YFB_cap_skin | 0.010412 | yes |
| Pileal_Stipeal_shell | YFB_cap_tissue | 0.003365 | yes |
| Pileal_Stipeal_shell | YFB_gill_tissue | 0.040279 | yes |
| Pileal_Stipeal_shell | YFB_veil | 0.033906 | yes |
| Pileal_Stipeal_shell | DIF_stipe_center | 0.006742 | yes |
| Pileal_Stipeal_shell | DIF_stipe_shell | 0.006387 | yes |
| Pileal_Stipeal_shell | DIF_stipe_skin | 0.006742 | yes |
| Pileal_Stipeal_shell | DIF_cap_skin | 0.043121 | yes |
| Pileal_Stipeal_shell | DIF_cap_tissue | 0.427639 | no |
| DIF_stipe_center | DIF_gill_tissue | 0.005671 | yes |
| DIF_stipe_center | YFB_stipe_center | 0.615255 | no |
| DIF_stipe_center | YFB_stipe_shell | 0.343177 | no |
| DIF_stipe_center | YFB_stipe_skin | 0.908721 | no |
| DIF_stipe_center | YFB_cap_skin | 0.959147 | no |
| DIF_stipe_center | YFB_cap_tissue | 0.831541 | no |
| DIF_stipe_center | YFB_gill_tissue | 0.426406 | no |
| DIF_stipe_center | YFB_veil | 0.574986 | no |
| DIF_stipe_center | DIF_stipe_shell | 0.974793 | no |
| DIF_stipe_center | DIF_stipe_skin | 0.978217 | no |
| DIF_stipe_center | DIF_cap_skin | 0.434257 | no |
| DIF_stipe_center | DIF_cap_tissue | 0.056170 | no |
| DIF_stipe_shell | DIF_gill_tissue | 0.008121 | yes |
| DIF_stipe_shell | YFB_stipe_center | 0.664989 | no |
| DIF_stipe_shell | YFB_stipe_shell | 0.386346 | no |
| DIF_stipe_shell | YFB_stipe_skin | 0.937598 | no |
| DIF_stipe_shell | YFB_cap_skin | 0.933232 | no |
| DIF_stipe_shell | YFB_cap_tissue | 0.865616 | no |
| DIF_stipe_shell | YFB_gill_tissue | 0.395587 | no |
| DIF_stipe_shell | YFB_veil | 0.538952 | no |
| DIF_stipe_shell | DIF_stipe_skin | 0.954245 | no |
| DIF_stipe_shell | DIF_cap_skin | 0.405580 | no |
| DIF_stipe_shell | DIF_cap_tissue | 0.056561 | no |
| DIF_stipe_skin | DIF_gill_tissue | 0.006742 | yes |
| DIF_stipe_skin | YFB_stipe_center | 0.582080 | no |
| DIF_stipe_skin | YFB_stipe_shell | 0.316965 | no |
| DIF_stipe_skin | YFB_stipe_skin | 0.880087 | no |
| DIF_stipe_skin | YFB_cap_skin | 0.978899 | no |
| DIF_stipe_skin | YFB_cap_tissue | 0.799725 | no |
| DIF_stipe_skin | YFB_gill_tissue | 0.466859 | no |
| DIF_stipe_skin | YFB_veil | 0.617359 | no |
| DIF_stipe_skin | DIF_cap_skin | 0.473798 | no |
| DIF_stipe_skin | DIF_cap_tissue | 0.067147 | no |
| DIF_cap_skin | DIF_gill_tissue | 0.037364 | yes |
| DIF_cap_skin | YFB_stipe_center | 0.120972 | no |
| DIF_cap_skin | YFB_stipe_shell | 0.068830 | no |
| DIF_cap_skin | YFB_stipe_skin | 0.296217 | no |
| DIF_cap_skin | YFB_cap_skin | 0.505115 | no |
| DIF_cap_skin | YFB_cap_tissue | 0.221932 | no |
| DIF_cap_skin | YFB_gill_tissue | 0.992977 | no |
| DIF_cap_skin | YFB_veil | 0.922442 | no |
| DIF_cap_skin | DIF_cap_tissue | 0.366469 | no |
| DIF_cap_tissue | DIF_gill_tissue | 0.386972 | no |
| DIF_cap_tissue | YFB_stipe_center | 0.016949 | yes |
| DIF_cap_tissue | YFB_stipe_shell | 0.013485 | yes |
| DIF_cap_tissue | YFB_stipe_skin | 0.037818 | yes |
| DIF_cap_tissue | YFB_cap_skin | 0.080708 | no |
| DIF_cap_tissue | YFB_cap_tissue | 0.024187 | yes |
| DIF_cap_tissue | YFB_gill_tissue | 0.379450 | no |
| DIF_cap_tissue | YFB_veil | 0.282600 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|017000 MFPSQYHLTSPLLLFFLVSSTQSLKLSHPSSKFPFTHDPGFDIAKVAALGKSLPSHSWEYGTAAEALLELYDPEI SVFSPSFLSKTSQYLRTHRGRIRSLEYAADVITLGTDQNALSHGGGAIADPASLGVSAILLGDYLKDGEKFADGA TEQMGFTVGEAPRWENGAISHRLEAPELWADFVYMAPPFLAYYGLYNENLTLLEESVEQCRLYRQVLQASGGGLW RHIVGPSSPDPGLWSTGNAWAAAGMARILAAVTNTPKSVFGKDTEKKYTRWRSDAIESLTGYITEILDGAIAAPK DDGLLRNYLDDTSGGGHGFGEISGSTLLASVVYRMAVLQPKVFAKKGSEYLDWADGIMKTMGKGGHITENGTATP AVNPLAWQDTKPFTTGSPEGQNFVVLMYVTWRDCVDAGIC* |
| Coding | >AgabiH97|017000 ATGTTCCCATCTCAATACCATCTAACATCTCCCCTCCTCCTATTTTTCCTCGTTTCCTCAACCCAATCTTTGAAA CTCTCTCATCCTTCCTCAAAATTCCCATTTACTCATGATCCCGGTTTCGATATCGCAAAGGTCGCAGCTCTGGGC AAATCATTGCCTTCTCATTCCTGGGAATATGGCACAGCAGCAGAAGCTCTCCTCGAACTCTACGATCCTGAAATC TCCGTATTCTCACCCTCCTTTCTCTCCAAAACGAGTCAATATCTGAGAACTCATCGAGGACGAATTCGTTCATTG GAATACGCCGCAGATGTCATCACCCTTGGGACAGATCAAAATGCTCTATCACACGGTGGCGGTGCTATTGCTGAT CCTGCGAGTCTGGGTGTAAGCGCTATTTTGTTGGGAGATTATTTGAAAGACGGGGAGAAATTTGCTGATGGTGCG ACGGAGCAAATGGGTTTTACGGTTGGTGAAGCGCCGAGATGGGAGAATGGGGCGATATCGCATAGACTTGAGGCG CCTGAATTATGGGCGGATTTTGTTTACATGGCCCCGCCGTTCCTGGCGTATTATGGGCTTTACAATGAAAACTTG ACGCTGTTGGAGGAATCGGTAGAGCAGTGTAGGTTATATCGTCAAGTGCTGCAAGCTTCTGGTGGTGGATTATGG CGACACATTGTCGGTCCTTCGTCACCCGACCCTGGTCTATGGTCAACGGGAAACGCATGGGCAGCTGCAGGAATG GCACGAATTCTAGCCGCTGTCACCAACACTCCCAAATCCGTCTTTGGTAAAGATACCGAAAAGAAATATACTCGA TGGAGGTCCGACGCTATTGAGTCGTTGACCGGCTATATCACCGAAATTTTGGATGGAGCGATAGCGGCGCCGAAA GATGATGGTTTATTGAGGAATTACCTGGACGATACTTCAGGTGGTGGACATGGATTTGGTGAGATTTCGGGGAGC ACTTTGTTGGCGAGTGTGGTGTATAGGATGGCTGTTCTGCAACCAAAGGTGTTTGCGAAGAAGGGGAGCGAGTAT TTGGATTGGGCGGATGGGATTATGAAGACTATGGGTAAGGGTGGGCATATTACGGAAAATGGGACGGCGACGCCT GCTGTGAATCCGCTTGCATGGCAGGACACGAAGCCATTTACTACTGGGAGTCCAGAGGGCCAGAATTTTGTAGTG TTGATGTATGTGACCTGGAGGGATTGCGTTGATGCGGGGATCTGCTAG |
| Transcript | >AgabiH97|017000 ATGTTCCCATCTCAATACCATCTAACATCTCCCCTCCTCCTATTTTTCCTCGTTTCCTCAACCCAATCTTTGAAA CTCTCTCATCCTTCCTCAAAATTCCCATTTACTCATGATCCCGGTTTCGATATCGCAAAGGTCGCAGCTCTGGGC AAATCATTGCCTTCTCATTCCTGGGAATATGGCACAGCAGCAGAAGCTCTCCTCGAACTCTACGATCCTGAAATC TCCGTATTCTCACCCTCCTTTCTCTCCAAAACGAGTCAATATCTGAGAACTCATCGAGGACGAATTCGTTCATTG GAATACGCCGCAGATGTCATCACCCTTGGGACAGATCAAAATGCTCTATCACACGGTGGCGGTGCTATTGCTGAT CCTGCGAGTCTGGGTGTAAGCGCTATTTTGTTGGGAGATTATTTGAAAGACGGGGAGAAATTTGCTGATGGTGCG ACGGAGCAAATGGGTTTTACGGTTGGTGAAGCGCCGAGATGGGAGAATGGGGCGATATCGCATAGACTTGAGGCG CCTGAATTATGGGCGGATTTTGTTTACATGGCCCCGCCGTTCCTGGCGTATTATGGGCTTTACAATGAAAACTTG ACGCTGTTGGAGGAATCGGTAGAGCAGTGTAGGTTATATCGTCAAGTGCTGCAAGCTTCTGGTGGTGGATTATGG CGACACATTGTCGGTCCTTCGTCACCCGACCCTGGTCTATGGTCAACGGGAAACGCATGGGCAGCTGCAGGAATG GCACGAATTCTAGCCGCTGTCACCAACACTCCCAAATCCGTCTTTGGTAAAGATACCGAAAAGAAATATACTCGA TGGAGGTCCGACGCTATTGAGTCGTTGACCGGCTATATCACCGAAATTTTGGATGGAGCGATAGCGGCGCCGAAA GATGATGGTTTATTGAGGAATTACCTGGACGATACTTCAGGTGGTGGACATGGATTTGGTGAGATTTCGGGGAGC ACTTTGTTGGCGAGTGTGGTGTATAGGATGGCTGTTCTGCAACCAAAGGTGTTTGCGAAGAAGGGGAGCGAGTAT TTGGATTGGGCGGATGGGATTATGAAGACTATGGGTAAGGGTGGGCATATTACGGAAAATGGGACGGCGACGCCT GCTGTGAATCCGCTTGCATGGCAGGACACGAAGCCATTTACTACTGGGAGTCCAGAGGGCCAGAATTTTGTAGTG TTGATGTATGTGACCTGGAGGGATTGCGTTGATGCGGGGATCTGCTAG |
| Gene | >AgabiH97|017000 ATGTTCCCATCTCAATACCATCTAACATCTCCCCTCCTCCTATTTTTCCTCGTTTCCTCAACCCAATCTTTGAAA CTCTCTCATCCTTCCTCAAAATTCCCATTTACTCATGATCCCGGTTTCGATATCGCAAAGGTCGCAGCTCTGGGC AAATCATTGCCTTCTCATTCCTGGGAATATGGCACAGCAGCAGAAGCTCTCCTCGAACTCTACGATCCTGAAATC TCCGTATTCTCACCCTCCTTTCTCTCCAAAACGAGTCAATATCTGAGAACTCATCGAGGACGAATTCGTTCATTG GAATACGCCGCAGATGTCATCACCCTTGGGACAGATCAAAATGCTCTATCACACGGTGGCGGTGCTATTGCTGAT CCTGCGAGTCTGGGTGTAAGCGCTATTTTGTTGGGAGATTATTTGAAAGACGGGGAGAAATTTGCTGATGGTGCG ACGGAGCAAATGGGTTTTACGGTTGGTGAAGCGCCGAGATGGGAGAATGGGGCGATATCGCATAGACTTGAGGCG CCTGAATTATGGTACGCATCATCGTATAATCTTAATTCCTTTTTCTAATAATAGTTCTTTGAAGGGCGGATTTTG TTTACATGGCCCCGCCGTTCCTGGCGTATTATGGGCTTTACAATGAAAACTTGACGCTGTTGGAGGAATCGGTAG AGCAGTGTAGGTTATATCGTCAAGTGCTGCAAGCTTCTGGTGGTGGATTATGGCGACACATTGTCGGTCCTTCGT CACCCGACCCTGGTCTATGGTCAACGGGAAACGCATGGGCAGCTGCAGGAATGGCACGAATTCTAGCCGCTGTCA CCAACACTCCCAAATCCGTCTTTGGTAAAGATACCGAAAAGAAATATACTCGATGGAGGTCCGACGCTATTGAGT CGTTGACCGGCTATATCACCGAAATTTTGGATGGAGCGATAGCGGCGCCGAAAGATGATGGTTTATTGAGGAATT ACCTGGACGATACTTCAGGTGGTGGACATGGATTTGGTGAGATTTCGGGGAGCACTTTGTTGGCGAGTGTGGTGT ATAGGATGGCTGTTCTGCAACCAAAGGTGTTTGCGAAGAAGGGGAGCGAGTATTTGGATTGGGCGGATGGGATTA TGAAGACTATGGGTAAGGGTGGGCATATTACGGAAAATGGGACGGCGACGCCTGCTGTGAATCCGCTTGCATGGC AGGACACGAAGCCATTTACTACTGGGAGTCCAGAGGGCCAGAATTTTGTAGTGTTGATGTATGTGACCTGGAGGG ATTGCGTTGATGCGGGGATCTGCTAG |