© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|016910 |
| Gene name | |
| Location | scaffold_10:528849..530348 |
| Strand | + |
| Gene length (bp) | 1499 |
| Transcript length (bp) | 969 |
| Coding sequence length (bp) | 969 |
| Protein length (aa) | 323 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00775 | Dioxygenase_C | Dioxygenase | 8.6E-41 | 118 | 303 |
| PF04444 | Dioxygenase_N | Catechol dioxygenase N terminus | 2.6E-29 | 39 | 112 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q5PXQ6|CHQB_NOCSI | Hydroxyquinol 1,2-dioxygenase OS=Nocardioides simplex GN=chqB PE=1 SV=1 | 25 | 303 | 6.0E-62 |
| sp|Q6F4M7|NPCC_RHOOP | Hydroxyquinol 1,2-dioxygenase OS=Rhodococcus opacus GN=npcC PE=2 SV=1 | 36 | 279 | 2.0E-57 |
| sp|P86029|HQD2_CANAL | Catechol 1,2-dioxygenase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=HQD2 PE=1 SV=1 | 41 | 312 | 4.0E-52 |
| sp|P31019|PHEB_PSEUE | Catechol 1,2-dioxygenase OS=Pseudomonas sp. (strain EST1001) GN=pheB PE=3 SV=1 | 39 | 286 | 1.0E-30 |
| sp|P95607|CATA_RHOOP | Catechol 1,2-dioxygenase (Fragment) OS=Rhodococcus opacus GN=catA PE=1 SV=1 | 31 | 287 | 2.0E-30 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q5PXQ6|CHQB_NOCSI | Hydroxyquinol 1,2-dioxygenase OS=Nocardioides simplex GN=chqB PE=1 SV=1 | 25 | 303 | 6.0E-62 |
| sp|Q6F4M7|NPCC_RHOOP | Hydroxyquinol 1,2-dioxygenase OS=Rhodococcus opacus GN=npcC PE=2 SV=1 | 36 | 279 | 2.0E-57 |
| sp|P86029|HQD2_CANAL | Catechol 1,2-dioxygenase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=HQD2 PE=1 SV=1 | 41 | 312 | 4.0E-52 |
| sp|P31019|PHEB_PSEUE | Catechol 1,2-dioxygenase OS=Pseudomonas sp. (strain EST1001) GN=pheB PE=3 SV=1 | 39 | 286 | 1.0E-30 |
| sp|P95607|CATA_RHOOP | Catechol 1,2-dioxygenase (Fragment) OS=Rhodococcus opacus GN=catA PE=1 SV=1 | 31 | 287 | 2.0E-30 |
| sp|O67987|CLCA_RHOOP | Chlorocatechol 1,2-dioxygenase OS=Rhodococcus opacus GN=clcA PE=1 SV=1 | 45 | 271 | 1.0E-28 |
| sp|P0A396|TFDC_CUPPJ | Chlorocatechol 1,2-dioxygenase OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) GN=tfdC PE=3 SV=1 | 41 | 269 | 1.0E-26 |
| sp|P0A397|TFDC_BURCE | Chlorocatechol 1,2-dioxygenase OS=Burkholderia cepacia GN=tfdC PE=3 SV=1 | 41 | 269 | 1.0E-26 |
| sp|P11451|CLCA_PSEPU | Chlorocatechol 1,2-dioxygenase OS=Pseudomonas putida GN=clcA PE=1 SV=1 | 39 | 269 | 6.0E-26 |
| sp|P07773|CATA_ACIAD | Catechol 1,2-dioxygenase OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=catA PE=1 SV=1 | 41 | 281 | 5.0E-25 |
| sp|O33950|CATA2_ACILW | Catechol 1,2-dioxygenase 2 OS=Acinetobacter lwoffii GN=catA2 PE=1 SV=1 | 26 | 269 | 2.0E-24 |
| sp|P27098|TCBC_PSESQ | Chlorocatechol 1,2-dioxygenase OS=Pseudomonas sp. (strain P51) GN=tcbC PE=3 SV=1 | 39 | 271 | 1.0E-23 |
| sp|O33948|CATA1_ACILW | Catechol 1,2-dioxygenase 1 OS=Acinetobacter lwoffii GN=catA1 PE=1 SV=3 | 41 | 269 | 1.0E-21 |
| sp|Q43984|CATA_ACIGI | Catechol 1,2-dioxygenase OS=Acinetobacter guillouiae GN=catA PE=2 SV=1 | 25 | 301 | 2.0E-20 |
| sp|P00437|PCXB_PSEPU | Protocatechuate 3,4-dioxygenase beta chain OS=Pseudomonas putida GN=pcaH PE=1 SV=3 | 141 | 257 | 5.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003824 | catalytic activity | Yes |
| GO:0008199 | ferric iron binding | Yes |
| GO:0006725 | cellular aromatic compound metabolic process | Yes |
| GO:0009712 | catechol-containing compound metabolic process | Yes |
| GO:0018576 | catechol 1,2-dioxygenase activity | Yes |
| GO:0005506 | iron ion binding | Yes |
| GO:0005488 | binding | No |
| GO:1901615 | organic hydroxy compound metabolic process | No |
| GO:0043167 | ion binding | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0046872 | metal ion binding | No |
| GO:0043169 | cation binding | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0008152 | metabolic process | No |
| GO:0019114 | catechol dioxygenase activity | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0003674 | molecular_function | No |
| GO:0018958 | phenol-containing compound metabolic process | No |
| GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | No |
| GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | No |
| GO:0009987 | cellular process | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0051213 | dioxygenase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 36 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|016910 MSQADAAARVDTSKLPNVTDVTAANITEYVHQVNASCPDDRTRFIFKSMVQHLHDFVRETSLTSEEWMTAVKFLT DTGKISTDLRSEFILLSDVLGASTLVDILNNAKPPNATEATVLGPFFTDDAHDIESGGGIASEDKGDYMYVYGKV TDTKGNGIPGVVIETWETDGNGLYDNQDPNRDGPECRGRIHAKPDGTYSYRAVVPVGYSIPGDGPVGRMVQVLNR HTFRPAHIHMMLKAKGYETLTTALYLKTDKFLGSDVVFGVKSSLAVDLEYVKDPKAALSRGFPQARPHHALHYDF VLATPEEGANAREKLTLAGGKA* |
| Coding | >AgabiH97|016910 ATGTCTCAAGCTGACGCTGCCGCTCGAGTTGACACTTCTAAGCTACCCAATGTTACGGATGTCACTGCGGCGAAC ATAACTGAATATGTTCACCAAGTGAACGCGTCTTGTCCCGATGATAGGACAAGATTTATCTTCAAGTCTATGGTA CAACATCTTCATGATTTCGTGAGGGAAACTAGTCTTACAAGCGAGGAATGGATGACAGCCGTCAAGTTCCTCACC GACACTGGGAAAATATCTACAGACCTTCGTTCAGAATTCATCTTACTTTCAGATGTGCTAGGTGCCTCCACCTTG GTCGATATATTGAACAATGCCAAACCTCCCAACGCAACCGAGGCGACCGTTCTTGGACCATTCTTCACAGACGAT GCTCATGATATCGAGTCTGGGGGAGGTATTGCTTCGGAGGATAAGGGAGATTATATGTACGTTTATGGGAAGGTT ACTGATACCAAAGGCAATGGTATCCCTGGAGTTGTAATCGAGACATGGGAAACTGATGGGAACGGGCTCTACGAC AATCAGGATCCCAATCGAGATGGACCAGAATGCCGAGGCCGAATTCACGCGAAACCAGATGGAACCTATAGTTAT CGAGCTGTTGTCCCGGTTGGATATAGTATTCCTGGTGACGGGCCCGTAGGCAGAATGGTTCAAGTACTGAATCGT CATACCTTCCGACCTGCACATATCCATATGATGCTCAAGGCTAAGGGTTATGAAACTTTGACGACTGCATTATAC TTGAAGACAGACAAGTTCCTTGGTAGTGACGTTGTTTTTGGCGTGAAATCGTCCCTTGCTGTGGATTTGGAGTAT GTTAAAGATCCCAAGGCAGCATTGTCTCGTGGGTTCCCACAGGCTAGACCTCATCACGCCTTGCATTATGACTTC GTGTTGGCTACTCCTGAGGAGGGCGCGAACGCGAGGGAGAAATTGACACTTGCCGGCGGCAAAGCTTGA |
| Transcript | >AgabiH97|016910 ATGTCTCAAGCTGACGCTGCCGCTCGAGTTGACACTTCTAAGCTACCCAATGTTACGGATGTCACTGCGGCGAAC ATAACTGAATATGTTCACCAAGTGAACGCGTCTTGTCCCGATGATAGGACAAGATTTATCTTCAAGTCTATGGTA CAACATCTTCATGATTTCGTGAGGGAAACTAGTCTTACAAGCGAGGAATGGATGACAGCCGTCAAGTTCCTCACC GACACTGGGAAAATATCTACAGACCTTCGTTCAGAATTCATCTTACTTTCAGATGTGCTAGGTGCCTCCACCTTG GTCGATATATTGAACAATGCCAAACCTCCCAACGCAACCGAGGCGACCGTTCTTGGACCATTCTTCACAGACGAT GCTCATGATATCGAGTCTGGGGGAGGTATTGCTTCGGAGGATAAGGGAGATTATATGTACGTTTATGGGAAGGTT ACTGATACCAAAGGCAATGGTATCCCTGGAGTTGTAATCGAGACATGGGAAACTGATGGGAACGGGCTCTACGAC AATCAGGATCCCAATCGAGATGGACCAGAATGCCGAGGCCGAATTCACGCGAAACCAGATGGAACCTATAGTTAT CGAGCTGTTGTCCCGGTTGGATATAGTATTCCTGGTGACGGGCCCGTAGGCAGAATGGTTCAAGTACTGAATCGT CATACCTTCCGACCTGCACATATCCATATGATGCTCAAGGCTAAGGGTTATGAAACTTTGACGACTGCATTATAC TTGAAGACAGACAAGTTCCTTGGTAGTGACGTTGTTTTTGGCGTGAAATCGTCCCTTGCTGTGGATTTGGAGTAT GTTAAAGATCCCAAGGCAGCATTGTCTCGTGGGTTCCCACAGGCTAGACCTCATCACGCCTTGCATTATGACTTC GTGTTGGCTACTCCTGAGGAGGGCGCGAACGCGAGGGAGAAATTGACACTTGCCGGCGGCAAAGCTTGA |
| Gene | >AgabiH97|016910 ATGTCTCAAGCTGACGCTGCCGCTCGAGTTGACACTTCTAAGCTACCCAATGTTACGGATGTCACTGCGGCGAAC ATAACTGAATATGTTCACCAAGTGAACGCGTCTTGTGAGGATCCAGATTCTTGGTTTTAATATCCTTCCTCTGCT GAGAGCTGCTCACTATCCTGGCAGGTCCCGATGATAGGACAAGATTTATCTTCAAGTCTATGGTAGGTTATTCGT CTGATGGGATAGTTCTTCAAGGCTAATGATGATTCTGACTCCTGCAGGTACAACATCTTCATGATTTCGTGAGGG AAACTAGTCTTACAAGCGAGGAATGGATGTACGTAGTCTTAGACAATCCTTCTCTTGACTCTATATTCACCCATC ACGCCCATTAGGACAGCCGTCAAGTTCCTCACCGACACTGGGAAAATATCTACAGACCTTCGTTCAGGTGGTTCC AAATTCCTCCACCTTTTAAATGAGCGCACTAAGATTGAAAAACATCCCCAGAATTCATCTTACTTTCAGATGTGC TAGGTGCCTCCACCTTGGTCGATATATTGAACAATGCCAAACCTCCCAACGCAACCGAGGCGACCGTTCTTGGAC CATTCTTCACAGACGATGCTCATGATAGTATGTCAATGCGCTCCGTTTAGTCTTGCTACAACTTCTGATCCGCTG TCGGTTCTCTAGTCGAGTCTGGGGGAGGTATTGCTTCGGAGGATAAGGGAGATTATATGTACGTTTATGGGAAGG TTACTGATACCAAAGGCAATGGTATCCCTGGAGTTGTAATCGAGACATGGGAAACTGATGGGAACGGGCTCTACG ACAATCAGGTGTGTCCAGACTCGACATCCCTCCTCATCATGTACGAAACTGATCGCTTCTATCTGCAAAGGATCC CAATCGAGATGGACCAGAATGCCGAGGCCGAATTCACGCGAAACCAGATGGAACCTATAGTTATCGAGCTGTTGT GTAAGCTCTTGATTCTTGGAATTCCGAGCATGCGGTTGATTCTACTGTTTTTAAAGCCCGGTTGGATATAGTATT CCTGGTGACGGGCCCGTAGGCAGAATGGTTCAAGTACTGAATCGTCATACCTTCCGACCTGCACATATCCATATG ATGCTCAAGGTATGCTATATCACGGGGCCAAAAAACAGCTGAACCTACTTCTTTTATTATCAGGCTAAGGGTTAT GAAACTTTGACGACTGCATTATACTTGAAGACAGACAAGTTCCTTGGTAGTGACGTTGTTTTTGGCGTGAAATCG TCCCTTGCTGTGGTAAAGTCGTCCCATCGGTTAACGTACGTGACAATCAGCTGAAGATTGAAATCTAGGATTTGG AGTATGTTAAAGATCCCAAGGCAGCATTGTCTCGTGGGTTCCCACAGGCTAGACCTCATCACGCCTTGCATTATG ACTTCGTGTTGGCTACTCCTGAGGAGGGCGCGAACGCGAGGGAGAAATTGACACTTGCCGGCGGCAAAGCTTGA |