© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|016860 |
| Gene name | |
| Location | scaffold_10:521871..522622 |
| Strand | + |
| Gene length (bp) | 751 |
| Transcript length (bp) | 543 |
| Coding sequence length (bp) | 543 |
| Protein length (aa) | 181 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10342 | Kre9_KNH | Kre9/KNH-like N-terminal Ig-like domain | 1.7E-05 | 27 | 120 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | 0.0831 | 0.0421 | 0.8037 | 0.4974 | 0.0842 | 0.0011 | 0.2588 | 0.1165 | 0.1262 | 0.0054 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 19 | 0.999759 |
| Orthofinder run ID | 1 |
| Orthogroup | 3401 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Agaricus bisporus var bisporus H39 | AgabiH39|016860 |
| Agaricus bisporus var bisporus H97 | AgabiH97|016860 (this protein) |
| Rhodonia placenta FPRL280 | RhoplFPRL280|148_12 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|016860 MVALSALALALSAASLAAAQSTFQITNPSADHWWVAESSNVLTWDCKNNPHTTFGVFIANADQTLFAGDLAIIPQ QPNADCSKEITHNQVNQPPGSGYIIKFANAVNSSEVFAQSDQFEIRPLGSAFPTTSSPAGNSPSNTADNTAAGAS STDTPNGAASLKTLGVGFTAAAAGALAYLM* |
| Coding | >AgabiH97|016860 ATGGTCGCCCTCTCCGCCCTCGCCCTTGCTCTCTCTGCCGCCAGCCTTGCCGCTGCCCAGTCCACCTTCCAGATC ACCAATCCCTCCGCGGACCACTGGTGGGTTGCTGAATCGTCGAATGTTCTTACTTGGGACTGCAAGAACAACCCA CATACCACCTTTGGTGTTTTCATTGCCAACGCAGACCAAACATTGTTTGCAGGAGACCTCGCTATTATCCCTCAA CAGCCTAATGCCGATTGCTCCAAGGAAATCACTCACAACCAAGTCAACCAACCTCCCGGCAGTGGCTACATAATC AAGTTCGCCAACGCTGTCAACAGCTCAGAGGTCTTTGCTCAATCTGACCAGTTCGAGATCAGACCTCTCGGTTCT GCGTTCCCCACTACCTCGTCACCAGCAGGTAATAGCCCATCCAATACCGCAGACAACACAGCCGCCGGTGCTTCA TCCACTGACACACCCAACGGCGCCGCCTCTCTCAAAACTCTCGGTGTCGGTTTCACCGCTGCCGCAGCTGGTGCC TTGGCGTATCTCATGTGA |
| Transcript | >AgabiH97|016860 ATGGTCGCCCTCTCCGCCCTCGCCCTTGCTCTCTCTGCCGCCAGCCTTGCCGCTGCCCAGTCCACCTTCCAGATC ACCAATCCCTCCGCGGACCACTGGTGGGTTGCTGAATCGTCGAATGTTCTTACTTGGGACTGCAAGAACAACCCA CATACCACCTTTGGTGTTTTCATTGCCAACGCAGACCAAACATTGTTTGCAGGAGACCTCGCTATTATCCCTCAA CAGCCTAATGCCGATTGCTCCAAGGAAATCACTCACAACCAAGTCAACCAACCTCCCGGCAGTGGCTACATAATC AAGTTCGCCAACGCTGTCAACAGCTCAGAGGTCTTTGCTCAATCTGACCAGTTCGAGATCAGACCTCTCGGTTCT GCGTTCCCCACTACCTCGTCACCAGCAGGTAATAGCCCATCCAATACCGCAGACAACACAGCCGCCGGTGCTTCA TCCACTGACACACCCAACGGCGCCGCCTCTCTCAAAACTCTCGGTGTCGGTTTCACCGCTGCCGCAGCTGGTGCC TTGGCGTATCTCATGTGA |
| Gene | >AgabiH97|016860 ATGGTCGCCCTCTCCGCCCTCGCCCTTGCTCTCTCTGCCGCCAGCCTTGCCGCTGCCCAGTCCACCTTCCAGATC ACCAATCCCTCCGCGGACCACTGGTGGGGTGAGCTGTCGTCTTTTCTTCCTAGCTACAAACACAACTGACAGAAA CTAGTTGCTGAATCGTCGAATGTTCTTACTTGGGACTGCAAGAACAACCCACATACCACCTTTGGTGTTTTGTAC GTGTCTGGCTCCCCACTTCACTGGCCTGTTCTCACGCCTCTCTCTCGTCTAGCATTGCCAACGCAGTATGGCTAC TCGTTAGCATAAAATAAAATAATTATACTCATCCATTTCACAGGACCAAACATTGTTTGCAGGAGACCTCGCTAT TATCCCTCAACAGCCTAATGCCGATTGCTCCAAGGAAATCACTCACAACCAAGTCAACCAACCTCCCGGCAGTGG CTACATAATCAAGTTCGCCAACGCTGTCAACAGCTCAGAGGTACGTTTTTCCCGCTCTTCGCTCCAACCCGTGCT GATCCTTTCAAAGGTCTTTGCTCAATCTGACCAGTTCGAGATCAGACCTCTCGGTTCTGCGTTCCCCACTACCTC GTCACCAGCAGGTAATAGCCCATCCAATACCGCAGACAACACAGCCGCCGGTGCTTCATCCACTGACACACCCAA CGGCGCCGCCTCTCTCAAAACTCTCGGTGTCGGTTTCACCGCTGCCGCAGCTGGTGCCTTGGCGTATCTCATGTG A |