Fungal Genomics

Agaricus bisporus var bisporus H39 Agaricus bisporus var bisporus H97 Agaricus bisporus var burnettii H119p4 Aspergillus niger CBS 112.32 Aspergillus niger CBS 113.50 Aspergillus niger CBS 115988 Aspergillus niger CBS 115989 Aspergillus niger CBS 118.52 Aspergillus niger CBS 124.48 Aspergillus niger CBS 131.52 Aspergillus niger CBS 133816 Aspergillus niger CBS 147320 Aspergillus niger CBS 147321 Aspergillus niger CBS 147322 Aspergillus niger CBS 147323 Aspergillus niger CBS 147324 Aspergillus niger CBS 147343 Aspergillus niger CBS 147344 Aspergillus niger CBS 147345 Aspergillus niger CBS 147346 Aspergillus niger CBS 147347 Aspergillus niger CBS 147352 Aspergillus niger CBS 147353 Aspergillus niger CBS 147371 Aspergillus niger CBS 147482 Aspergillus niger CBS 630.78 Aspergillus niger CBS 769.97 Niveomyces coronatus CBS 149186 Ophiocordyceps australis 1348a (Ghana) Ophiocordyceps australis map64 (Brazil) Ophiocordyceps camponoti-floridani Ophiocordyceps camponoti-rufipedis Ophiocordyceps kimflemingae Ophiocordyceps subramaniannii Penicillium roqueforti DTO002I6 Penicillium roqueforti DTO003C3 Penicillium roqueforti DTO003H1 (CBS 147308) Penicillium roqueforti DTO006G1 Penicillium roqueforti DTO006G7 Penicillium roqueforti DTO012A1 Penicillium roqueforti DTO012A2 (CBS 147309) Penicillium roqueforti DTO012A6 (CBS 147310) Penicillium roqueforti DTO012A7 Penicillium roqueforti DTO012A8 Penicillium roqueforti DTO012A9 Penicillium roqueforti DTO013E5 Penicillium roqueforti DTO013F2 Penicillium roqueforti DTO013F5 (CBS 147311) Penicillium roqueforti DTO027I6 Penicillium roqueforti DTO032C6 Penicillium roqueforti DTO039G3 Penicillium roqueforti DTO046C5 Penicillium roqueforti DTO070G2 (CBS 147317) Penicillium roqueforti DTO081F9 (CBS 147318) Penicillium roqueforti DTO101D6 (CBS 147325) Penicillium roqueforti DTO102I9 (CBS 147326) Penicillium roqueforti DTO126G2 (CBS 147330) Penicillium roqueforti DTO127F7 (CBS 147331) Penicillium roqueforti DTO127F9 (CBS 147332) Penicillium roqueforti DTO130C1 (CBS 147333) Penicillium roqueforti DTO163C3 (CBS 147337) Penicillium roqueforti DTO163F5 (CBS 147338) Penicillium roqueforti DTO163G4 (CBS 147339) Penicillium roqueforti DTO265D5 (CBS 147372) Penicillium roqueforti DTO369A1 (CBS 147354) Penicillium roqueforti DTO375B1 (CBS 147355) Penicillium roqueforti DTO377G2 (LCP 96.3914a) Penicillium roqueforti LCP96 04111 Rhodonia placenta FPRL280 Torrubiellomyces zombiae CBS 149187

General Properties

Protein ID	AgabiH97|016820
Gene name
Location	scaffold_10:508742..510625
Strand	+
Gene length (bp)	1883
Transcript length (bp)	1374
Coding sequence length (bp)	1374
Protein length (aa)	458

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF08288	PIGA	PIGA (GPI anchor biosynthesis)	7.2E-37	45	133
PF13439	Glyco_transf_4	Glycosyltransferase Family 4	1.5E-24	17	163
PF00534	Glycos_transf_1	Glycosyl transferases group 1	1.8E-24	199	347
PF13692	Glyco_trans_1_4	Glycosyl transferases group 1	2.4E-21	211	346
PF13579	Glyco_trans_4_4	Glycosyl transferase 4-like domain	1.5E-09	18	162

Swissprot hits

GO

GO Term	Description	Terminal node
GO:0016757	glycosyltransferase activity	Yes
GO:0006506	GPI anchor biosynthetic process	Yes
GO:0008152	metabolic process	No
GO:0043412	macromolecule modification	No
GO:1901576	organic substance biosynthetic process	No
GO:0046486	glycerolipid metabolic process	No
GO:0008654	phospholipid biosynthetic process	No
GO:1901137	carbohydrate derivative biosynthetic process	No
GO:0019538	protein metabolic process	No
GO:0009247	glycolipid biosynthetic process	No
GO:0008150	biological_process	No
GO:0071704	organic substance metabolic process	No
GO:0006793	phosphorus metabolic process	No
GO:1901564	organonitrogen compound metabolic process	No
GO:0006497	protein lipidation	No
GO:0044255	cellular lipid metabolic process	No
GO:0006796	phosphate-containing compound metabolic process	No
GO:0009058	biosynthetic process	No
GO:0045017	glycerolipid biosynthetic process	No
GO:0006664	glycolipid metabolic process	No
GO:1903509	liposaccharide metabolic process	No
GO:0046474	glycerophospholipid biosynthetic process	No
GO:0003674	molecular_function	No
GO:0044249	cellular biosynthetic process	No
GO:0006629	lipid metabolic process	No
GO:0044237	cellular metabolic process	No
GO:0003824	catalytic activity	No
GO:0046467	membrane lipid biosynthetic process	No
GO:0008610	lipid biosynthetic process	No
GO:0009987	cellular process	No
GO:0006644	phospholipid metabolic process	No
GO:0044238	primary metabolic process	No
GO:0036211	protein modification process	No
GO:0090407	organophosphate biosynthetic process	No
GO:1901135	carbohydrate derivative metabolic process	No
GO:0006643	membrane lipid metabolic process	No
GO:0016740	transferase activity	No
GO:0006807	nitrogen compound metabolic process	No
GO:0006650	glycerophospholipid metabolic process	No
GO:0046488	phosphatidylinositol metabolic process	No
GO:0019637	organophosphate metabolic process	No
GO:0043170	macromolecule metabolic process	No
GO:0006661	phosphatidylinositol biosynthetic process	No
GO:0006505	GPI anchor metabolic process	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 20	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	406	428	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97|016820 MERLAIAMISDFFHPNVGGVENHIYMLSTELIRRGHKVIVITHAHKPDRVGIRWLLPSLKVYYIPFIPIASSATL PNFFTSLPYLRTILLREHIHLIHAHASLSSIGHEGILHSHLMGIRTVFTDHSLFGFEDAASILTNKLLVATLKNV DAVICVSHTGRENTVLRGQLFEKDQNDSTKLSVRRSVYVIPNALVAEQFKPRPPEPSEFITIVVISRLAYRKGID LLVATAPRICAAFPNVRFVVGGDGPKLIDLLQMREKHLLQDRVELLGAIRHSDVLSVLSRGTIFMNTSLTESFGI AILEAACAGLYVVSTRVGGVPEILPQDMISFAEPDADDVYRAISEAITLVAAGKHDPMKAHERLKTFYDWRLVAA RTEKVYTAVVQSPQMGLVERIQRTMDLGPCVGPIYTIILLVDCIFFLVLEWFYPREDLDYVEHHWDDDALTQLQS LSYSRES*
Coding	>AgabiH97|016820 ATGGAGAGGCTTGCAATTGCTATGATATCGGACTTCTTTCATCCCAATGTTGGAGGTGTAGAGAACCACATTTAC ATGCTAAGTACGGAGTTGATAAGACGTGGTCACAAGGTTATAGTGATAACCCACGCACATAAACCAGACCGCGTC GGTATTCGCTGGCTTCTTCCATCTCTCAAAGTCTACTATATACCCTTTATACCCATTGCATCCTCGGCCACACTC CCAAATTTCTTCACTTCACTACCGTATCTTAGAACCATCCTCTTACGCGAACACATACACTTAATTCATGCTCAT GCCAGCTTATCCTCGATTGGACATGAAGGCATTCTACATTCGCACCTCATGGGTATTCGGACAGTCTTCACTGAT CACAGTCTCTTCGGCTTCGAAGATGCGGCAAGTATTTTGACCAACAAACTTCTTGTCGCTACTCTCAAAAACGTG GATGCGGTCATCTGTGTCTCACATACCGGGCGGGAAAATACTGTTCTACGAGGGCAACTATTCGAGAAAGACCAA AACGATTCTACCAAGCTCTCTGTTCGACGAAGTGTTTACGTAATCCCTAATGCGCTCGTCGCGGAGCAATTCAAG CCACGCCCGCCAGAGCCTAGCGAATTCATCACTATTGTCGTTATCTCCAGGCTCGCCTATCGAAAAGGTATCGAC TTACTTGTAGCAACTGCTCCTCGTATTTGCGCCGCATTTCCCAATGTAAGATTCGTCGTTGGCGGTGATGGTCCC AAGTTGATTGATCTTCTCCAGATGCGCGAAAAACATTTATTGCAAGATCGTGTCGAATTACTAGGCGCAATACGT CATAGTGATGTCCTTTCGGTCTTGTCCCGCGGTACAATATTCATGAACACATCCTTGACAGAATCATTTGGCATA GCCATTCTCGAAGCTGCCTGTGCCGGTTTATACGTCGTATCTACTCGGGTCGGAGGAGTACCAGAAATTTTACCA CAAGACATGATCAGTTTTGCTGAGCCAGATGCAGATGACGTCTACCGTGCTATCTCAGAAGCCATTACACTGGTC GCAGCAGGAAAACATGACCCGATGAAAGCACACGAACGCCTAAAAACTTTTTATGATTGGCGCTTGGTTGCCGCA AGGACTGAAAAAGTATACACCGCCGTCGTTCAGTCGCCTCAAATGGGATTGGTGGAACGCATTCAAAGGACAATG GATTTAGGTCCTTGTGTAGGACCCATATATACGATAATCCTGTTAGTTGATTGCATATTCTTCTTGGTGTTGGAA TGGTTTTATCCAAGAGAGGACCTGGATTACGTAGAACATCATTGGGATGATGATGCACTTACCCAGCTTCAGTCC CTGTCGTATAGTAGGGAGAGTTAA
Transcript	>AgabiH97|016820 ATGGAGAGGCTTGCAATTGCTATGATATCGGACTTCTTTCATCCCAATGTTGGAGGTGTAGAGAACCACATTTAC ATGCTAAGTACGGAGTTGATAAGACGTGGTCACAAGGTTATAGTGATAACCCACGCACATAAACCAGACCGCGTC GGTATTCGCTGGCTTCTTCCATCTCTCAAAGTCTACTATATACCCTTTATACCCATTGCATCCTCGGCCACACTC CCAAATTTCTTCACTTCACTACCGTATCTTAGAACCATCCTCTTACGCGAACACATACACTTAATTCATGCTCAT GCCAGCTTATCCTCGATTGGACATGAAGGCATTCTACATTCGCACCTCATGGGTATTCGGACAGTCTTCACTGAT CACAGTCTCTTCGGCTTCGAAGATGCGGCAAGTATTTTGACCAACAAACTTCTTGTCGCTACTCTCAAAAACGTG GATGCGGTCATCTGTGTCTCACATACCGGGCGGGAAAATACTGTTCTACGAGGGCAACTATTCGAGAAAGACCAA AACGATTCTACCAAGCTCTCTGTTCGACGAAGTGTTTACGTAATCCCTAATGCGCTCGTCGCGGAGCAATTCAAG CCACGCCCGCCAGAGCCTAGCGAATTCATCACTATTGTCGTTATCTCCAGGCTCGCCTATCGAAAAGGTATCGAC TTACTTGTAGCAACTGCTCCTCGTATTTGCGCCGCATTTCCCAATGTAAGATTCGTCGTTGGCGGTGATGGTCCC AAGTTGATTGATCTTCTCCAGATGCGCGAAAAACATTTATTGCAAGATCGTGTCGAATTACTAGGCGCAATACGT CATAGTGATGTCCTTTCGGTCTTGTCCCGCGGTACAATATTCATGAACACATCCTTGACAGAATCATTTGGCATA GCCATTCTCGAAGCTGCCTGTGCCGGTTTATACGTCGTATCTACTCGGGTCGGAGGAGTACCAGAAATTTTACCA CAAGACATGATCAGTTTTGCTGAGCCAGATGCAGATGACGTCTACCGTGCTATCTCAGAAGCCATTACACTGGTC GCAGCAGGAAAACATGACCCGATGAAAGCACACGAACGCCTAAAAACTTTTTATGATTGGCGCTTGGTTGCCGCA AGGACTGAAAAAGTATACACCGCCGTCGTTCAGTCGCCTCAAATGGGATTGGTGGAACGCATTCAAAGGACAATG GATTTAGGTCCTTGTGTAGGACCCATATATACGATAATCCTGTTAGTTGATTGCATATTCTTCTTGGTGTTGGAA TGGTTTTATCCAAGAGAGGACCTGGATTACGTAGAACATCATTGGGATGATGATGCACTTACCCAGCTTCAGTCC CTGTCGTATAGTAGGGAGAGTTAA
Gene	>AgabiH97|016820 ATGGAGAGGCTTGCAATTGCGTACGTGCCAACCTTTTTTACAATGACGTGTAGCTTACATGGAGACTGTCAGTAT GATATCGGACTTCTTTCATCCCAATGTTGGAGGTGTAGAGAACCACATTTACATGCTAAGTACGGAGTTGATAAG ACGTGGTCACAAGGTACGTTTTGCACTCATTTAGGACAAAAGTTCGCATATCTGAGGTGGACCTACACAAAGGTT ATAGTGATAACCCACGCACATAAACCAGACCGCGTCGGTATTCGCTGGCTTCTTCCATCTCTCAAAGTCTACTAT ATACCCTTTATACCCATTGCATCCTCGGCCACACTCCCAAATTTCTTCACTTCACTACCGTATCTTAGAACCATC CTCTTACGCGAACACATACACTTAATTCATGCTCATGCCAGCTTATCCTCGATTGGACATGAAGGCATTCTACAT TCGCACCTCATGGGTATTCGGACAGTCTTCACTGATCACAGTCTCTTCGGCTTCGAAGATGCGGCAAGTATTTTG ACCAACAAACTTCTTGTCGCTACTCTCAAAAACGTGGATGCGGTCATCTGTGTCTCACATACCGGGTTCGTACTC GCTCATTGCGTATTGCATCAGCTAAATAGTATATACAGGCGGGAAAATACTGTTCTACGAGGGCAACTATTCGAG AAAGACCAAAACGATTCTACCAAGCTCTCTGTTCGACGAAGTGTTTACGTAATCCCTAATGCGCTCGTCGCGGAG CAATTCAAGCCACGCCCGCCAGAGCCTAGCGAATTCAGTGCATTTATCCGCGCCTTACGATAGGGGATATGAATG ACTAATATTCATTTTCAGTCACTATTGTCGTTATCTCCAGGCTCGCCTATCGAAAAGGTATCGACTTACTTGTAG CAACTGCTCCTCGTATTTGCGCCGCATTTCCCAATGTAAGATTCGTCGTTGGTACGTCGCCTTCCCGCCAAACGA TGGAAATCTTGAGTTCACAGAAAGTCTAACAAAACGATAGGCGGTGATGGTCCCAAGTTGATTGATCTTCTCCAG ATGCGCGAAAAACATTTATTGCAAGATCGTGTCGAATTACTAGGCGCAATACGTCATAGTGATGTCCTTTCGGTG AGTAAACCCATCGAAATTCACTTCTCAACTTAACTCAAAATTCTGAGCAATAGGTCTTGTCCCGCGGTACAATAT TCATGAACACATCCTTGACAGAATCATTTGGCATAGCCATTCTCGAAGCTGCCTGTGCCGGTTTATACGTCGTAT CTACTCGGGTCGGAGGAGTACCAGAAATTTTACCACAAGACATGATCAGTTTTGCTGAGCCAGATGCAGATGGTA TGTATATGGTCCCTTTCTCATATAAGACTGTATTGCATCAATATAGCTTCATGAGTTACGGGACCCATGAGCATG GGACTACGAAAACTGATTTAGCGAAATTTTTTTCTTTTCTTCCTGACAGACGTCTACCGTGCTATCTCAGAAGCC ATTACACTGGTCGCAGCAGGAAAACATGACCCGATGAAAGCACACGAACGCCTAAAAACTTTTTATGATTGGCGC TTGGTTGCCGCAAGGACTGAAAAAGTATACACCGCCGTCGTTCAGTCGCCTCAAATGGGATTGGTGGAACGCATT CAAAGGTACGTCGAGATGGTTTGTGTCGTGGCGGAAAATTAATTTCCATTAGGACAATGGATTTAGGTCCTTGTG TAGGACCCATATATACGATAATCCTGTTAGTTGATTGCATATTCTTCTTGGTGTTGGAATGGTTTTATCCAAGAG AGGACCTGGATTACGTAGAACATCATTGGGATGATGATGCACTTACCCAGCTTCAGTCCCTGTCGTATAGTAGGG AGAGTTAA