Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|016400
Gene name
Locationscaffold_10:406934..407252
Strand-
Gene length (bp)318
Transcript length (bp)249
Coding sequence length (bp)249
Protein length (aa) 83

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|016400
MPSFKSSSLFFYLAAAADACTSKSLTKGKEDVTIESAVQISIGVKKESDLAFSYTNVLIKVDMIDSYSLSSRNTE
YRTLISL*
Coding >AgabiH97|016400
ATGCCAAGCTTCAAGAGCTCGAGCCTATTTTTCTACCTCGCTGCTGCTGCTGATGCTTGCACTTCAAAATCCCTA
ACAAAAGGAAAAGAAGATGTCACGATTGAAAGCGCTGTCCAGATATCTATTGGCGTCAAGAAGGAAAGCGACCTT
GCCTTCTCGTATACCAATGTTTTGATCAAGGTGGATATGATCGACTCCTACAGCCTCTCTTCAAGGAACACGGAG
TATAGAACGTTAATTTCCCTATGA
Transcript >AgabiH97|016400
ATGCCAAGCTTCAAGAGCTCGAGCCTATTTTTCTACCTCGCTGCTGCTGCTGATGCTTGCACTTCAAAATCCCTA
ACAAAAGGAAAAGAAGATGTCACGATTGAAAGCGCTGTCCAGATATCTATTGGCGTCAAGAAGGAAAGCGACCTT
GCCTTCTCGTATACCAATGTTTTGATCAAGGTGGATATGATCGACTCCTACAGCCTCTCTTCAAGGAACACGGAG
TATAGAACGTTAATTTCCCTATGA
Gene >AgabiH97|016400
ATGCCAAGCTTCAAGAGCTCGAGCCTATTTTTCTACCTCGCTGCTGCTGCTGATGCTTGCACTTCAAAATCCCTA
ACAAAAGGAAAAGAAGATGTCACGATTGAAAGCGCTGTCCAGATATCTATTGGCGTCAAGAAGGAAAGCGACCTT
GCCTTCTCGTATACCAATGTACGCTCTCTCCTTCAAAAGCAAGAGCAAAGCTTGATTGATCTGATCGATCACTAA
TCTATCCTGTAGGTTTTGATCAAGGTGGATATGATCGACTCCTACAGCCTCTCTTCAAGGAACACGGAGTATAGA
ACGTTAATTTCCCTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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