Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|016340
Gene name
Locationscaffold_10:393080..393554
Strand+
Gene length (bp)474
Transcript length (bp)348
Coding sequence length (bp)348
Protein length (aa) 116

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01185 Hydrophobin Fungal hydrophobin 3.9E-18 39 111

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O13300|HYP3_AGABI Hydrophobin-3 OS=Agaricus bisporus GN=abh3 PE=3 SV=1 1 115 1.0E-21
sp|P04158|SC1_SCHCO Fruiting body protein SC1 OS=Schizophyllum commune GN=SC1 PE=2 SV=2 13 115 2.0E-17
sp|P16933|SC3_SCHCO Fruiting body protein SC3 OS=Schizophyllum commune GN=SC3 PE=1 SV=2 1 113 3.0E-14
sp|O74300|SC6_SCHCO Hydrophobin-6 OS=Schizophyllum commune GN=SC6 PE=3 SV=1 37 115 4.0E-14
sp|P49073|HYP2_AGABI Hydrophobin-2 OS=Agaricus bisporus GN=hypC PE=3 SV=2 1 115 9.0E-13
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Swissprot ID Swissprot Description Start End E-value
sp|O13300|HYP3_AGABI Hydrophobin-3 OS=Agaricus bisporus GN=abh3 PE=3 SV=1 1 115 1.0E-21
sp|P04158|SC1_SCHCO Fruiting body protein SC1 OS=Schizophyllum commune GN=SC1 PE=2 SV=2 13 115 2.0E-17
sp|P16933|SC3_SCHCO Fruiting body protein SC3 OS=Schizophyllum commune GN=SC3 PE=1 SV=2 1 113 3.0E-14
sp|O74300|SC6_SCHCO Hydrophobin-6 OS=Schizophyllum commune GN=SC6 PE=3 SV=1 37 115 4.0E-14
sp|P49073|HYP2_AGABI Hydrophobin-2 OS=Agaricus bisporus GN=hypC PE=3 SV=2 1 115 9.0E-13
sp|O43122|HYP4_AGABI Hydrophobin-B OS=Agaricus bisporus GN=hypB PE=3 SV=1 37 115 2.0E-12
sp|P49072|HYP1_AGABI Hydrophobin-1 OS=Agaricus bisporus GN=hypA PE=2 SV=1 25 115 5.0E-12
sp|P52749|HYP2_PISTI Hydrophobin-2 (Fragment) OS=Pisolithus tinctorius GN=HYD-2 PE=2 SV=1 38 114 2.0E-10
sp|P16934|SC4_SCHCO Fruiting body protein SC4 OS=Schizophyllum commune GN=SC4 PE=2 SV=1 39 113 1.0E-07
sp|P52748|HYP1_PISTI Hydrophobin-1 OS=Pisolithus tinctorius GN=HYD-1 PE=2 SV=1 31 114 1.0E-07
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GO

GO Term Description Terminal node
GO:0005199 structural constituent of cell wall Yes
GO:0009277 fungal-type cell wall Yes
GO:0005575 cellular_component No
GO:0003674 molecular_function No
GO:0005618 cell wall No
GO:0030312 external encapsulating structure No
GO:0005198 structural molecule activity No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|016340
MYSKLALFVLSAFALGVVAADEPAAAPAPPPPVINNSQCDVGKVQCCQSMQDVKSSAVQTLAHSLGVDLGGVTGL
VGLTCNVLGGSSCSAQPVCCDKNHFGGLIAVGCSPVNVSL*
Coding >AgabiH97|016340
ATGTACTCCAAGCTCGCTCTCTTCGTCCTCTCCGCTTTTGCTCTCGGCGTTGTCGCAGCCGATGAGCCTGCTGCT
GCCCCCGCTCCTCCCCCCCCTGTTATCAACAACTCCCAGTGCGACGTTGGAAAAGTCCAGTGCTGTCAATCCATG
CAAGATGTCAAGTCCTCGGCCGTTCAAACACTCGCTCACTCGCTCGGTGTTGACCTCGGAGGTGTTACTGGTCTA
GTCGGTCTCACCTGTAACGTCCTCGGTGGCAGCAGCTGTTCCGCTCAACCCGTTTGCTGCGATAAGAACCACTTC
GGAGGCCTCATCGCTGTTGGCTGCTCCCCCGTCAACGTCAGCCTCTAG
Transcript >AgabiH97|016340
ATGTACTCCAAGCTCGCTCTCTTCGTCCTCTCCGCTTTTGCTCTCGGCGTTGTCGCAGCCGATGAGCCTGCTGCT
GCCCCCGCTCCTCCCCCCCCTGTTATCAACAACTCCCAGTGCGACGTTGGAAAAGTCCAGTGCTGTCAATCCATG
CAAGATGTCAAGTCCTCGGCCGTTCAAACACTCGCTCACTCGCTCGGTGTTGACCTCGGAGGTGTTACTGGTCTA
GTCGGTCTCACCTGTAACGTCCTCGGTGGCAGCAGCTGTTCCGCTCAACCCGTTTGCTGCGATAAGAACCACTTC
GGAGGCCTCATCGCTGTTGGCTGCTCCCCCGTCAACGTCAGCCTCTAG
Gene >AgabiH97|016340
ATGTACTCCAAGCTCGCTCTCTTCGTCCTCTCCGCTTTTGCTCTCGGCGTTGTCGCAGCCGATGAGCCTGCTGCT
GCCCCCGCTCCTCCCCCCCCTGTTATCAACAACTCCCAGTGCGACGTTGGAAAAGTCCAGTGCTGTTAGTCATAT
ATATTGCGTCTCATTAACTACTAGAAAATCTGATAATTCTTACTTTTTGAAGGTCAATCCATGCAAGATGTCAAG
TCCTCGGCCGTTCAAACACTCGCTCACTCGCTCGGTGTTGACCTCGGAGGTGTTACTGGTCTAGTCGGTCTCACC
TGTAACGTCCTCGGTGGCAGCAGCTGTTCCGCTCAACCCGTTTGCTGCGATAAGAACCACTTCGGTAAGTATTTG
TGATCGAAATCATGGTGGATGATTGAGAATACTAATATATTGGTTTCTTTAGGAGGCCTCATCGCTGTTGGCTGC
TCCCCCGTCAACGTCAGCCTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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