Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|016260
Gene name
Locationscaffold_10:361601..363230
Strand+
Gene length (bp)1629
Transcript length (bp)1185
Coding sequence length (bp)1185
Protein length (aa) 395

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07859 Abhydrolase_3 alpha/beta hydrolase fold 7.3E-14 72 207
PF20434 BD-FAE BD-FAE 1.4E-13 53 172

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q566U4|KFA_DANRE Kynurenine formamidase OS=Danio rerio GN=afmid PE=2 SV=2 8 228 9.0E-09
sp|Q9ZQ91|CXE7_ARATH Probable carboxylesterase 7 OS=Arabidopsis thaliana GN=CXE7 PE=2 SV=1 68 208 5.0E-08
sp|Q9SX25|CXE6_ARATH Probable carboxylesterase 6 OS=Arabidopsis thaliana GN=CXE6 PE=2 SV=1 55 219 2.0E-07
sp|Q9SMM9|CXE13_ARATH Probable carboxylesterase 13 OS=Arabidopsis thaliana GN=CXE13 PE=1 SV=1 38 198 3.0E-06
sp|P14326|VSH5_DICDI Vegetative-specific protein H5 OS=Dictyostelium discoideum GN=cinB PE=2 SV=2 10 238 5.0E-06
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Swissprot ID Swissprot Description Start End E-value
sp|Q566U4|KFA_DANRE Kynurenine formamidase OS=Danio rerio GN=afmid PE=2 SV=2 8 228 9.0E-09
sp|Q9ZQ91|CXE7_ARATH Probable carboxylesterase 7 OS=Arabidopsis thaliana GN=CXE7 PE=2 SV=1 68 208 5.0E-08
sp|Q9SX25|CXE6_ARATH Probable carboxylesterase 6 OS=Arabidopsis thaliana GN=CXE6 PE=2 SV=1 55 219 2.0E-07
sp|Q9SMM9|CXE13_ARATH Probable carboxylesterase 13 OS=Arabidopsis thaliana GN=CXE13 PE=1 SV=1 38 198 3.0E-06
sp|P14326|VSH5_DICDI Vegetative-specific protein H5 OS=Dictyostelium discoideum GN=cinB PE=2 SV=2 10 238 5.0E-06
sp|Q9SX78|CXE2_ARATH Probable carboxylesterase 2 OS=Arabidopsis thaliana GN=CXE2 PE=2 SV=1 55 198 5.0E-06
sp|Q5NUF4|HIDM_GLYEC 2-hydroxyisoflavanone dehydratase OS=Glycyrrhiza echinata GN=HIDM PE=1 SV=1 55 179 6.0E-06
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GO

GO Term Description Terminal node
GO:0016787 hydrolase activity Yes
GO:0003824 catalytic activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 15 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Casing Casing mycelium 3.97 1.65 6.28
Initials Initials knots 2.58 1.00 4.16
Pileal_Stipeal_center Stage I stipe center 7.68 3.62 11.75
Pileal_Stipeal_shell Stage I stipe shell 10.72 5.19 16.25
DIF_stipe_center Stage II stipe center 7.13 3.35 10.91
DIF_stipe_shell Stage II stipe shell 5.58 2.47 8.70
DIF_stipe_skin Stage II stipe skin 6.26 2.86 9.66
DIF_cap_skin Stage II cap skin 10.23 5.00 15.45
DIF_cap_tissue Stage II cap tissue 9.89 4.75 15.02
DIF_gill_tissue Stage II gill tissue 12.29 6.21 18.36
YFB_stipe_center Young fruiting body stipe center 5.74 2.57 8.92
YFB_stipe_shell Young fruiting body stipe shell 4.25 1.84 6.67
YFB_stipe_skin Young fruiting body stipe skin 6.52 3.01 10.04
YFB_cap_skin Young fruiting body cap skin 8.80 4.26 13.34
YFB_cap_tissue Young fruiting body cap tissue 9.62 4.71 14.53
YFB_gill_tissue Young fruiting body gill tissue 8.00 3.67 12.34
YFB_veil Young fruiting body veil 9.55 4.68 14.41

Differential expression

Label1 Label2 Q-value Significant difference
Casing DIF_gill_tissue 0.001140 yes
Casing YFB_stipe_center 0.429259 no
Casing YFB_stipe_shell 0.924984 no
Casing YFB_stipe_skin 0.239648 no
Casing YFB_cap_skin 0.027451 yes
Casing YFB_cap_tissue 0.013485 yes
Casing YFB_gill_tissue 0.062995 no
Casing YFB_veil 0.014081 yes
Casing Initials 0.367818 no
Casing Pileal_Stipeal_center 0.075194 no
Casing Pileal_Stipeal_shell 0.003765 yes
Casing DIF_stipe_center 0.137722 no
Casing DIF_stipe_shell 0.477859 no
Casing DIF_stipe_skin 0.293182 no
Casing DIF_cap_skin 0.005302 yes
Casing DIF_cap_tissue 0.010093 yes
DIF_gill_tissue YFB_stipe_center 0.033211 yes
DIF_gill_tissue YFB_stipe_shell 0.002951 yes
DIF_gill_tissue YFB_stipe_skin 0.083158 no
DIF_gill_tissue YFB_cap_skin 0.434185 no
DIF_gill_tissue YFB_cap_tissue 0.611869 no
DIF_gill_tissue YFB_gill_tissue 0.281732 no
DIF_gill_tissue YFB_veil 0.595881 no
YFB_stipe_center YFB_stipe_shell 0.558591 no
YFB_stipe_center YFB_stipe_skin 0.845712 no
YFB_stipe_center YFB_cap_skin 0.308545 no
YFB_stipe_center YFB_cap_tissue 0.184203 no
YFB_stipe_center YFB_gill_tissue 0.483821 no
YFB_stipe_center YFB_veil 0.195568 no
YFB_stipe_shell YFB_stipe_skin 0.343711 no
YFB_stipe_shell YFB_cap_skin 0.046952 yes
YFB_stipe_shell YFB_cap_tissue 0.024187 yes
YFB_stipe_shell YFB_gill_tissue 0.109622 no
YFB_stipe_shell YFB_veil 0.026215 yes
YFB_stipe_skin YFB_cap_skin 0.533575 no
YFB_stipe_skin YFB_cap_tissue 0.366313 no
YFB_stipe_skin YFB_gill_tissue 0.714774 no
YFB_stipe_skin YFB_veil 0.382454 no
YFB_cap_skin YFB_cap_tissue 0.891292 no
YFB_cap_skin YFB_gill_tissue 0.886928 no
YFB_cap_skin YFB_veil 0.901919 no
YFB_cap_tissue YFB_gill_tissue 0.743273 no
YFB_cap_tissue YFB_veil 0.991274 no
YFB_gill_tissue YFB_veil 0.756657 no
Initials DIF_gill_tissue 0.000613 yes
Initials YFB_stipe_center 0.042041 yes
Initials YFB_stipe_shell 0.270753 no
Initials YFB_stipe_skin 0.012274 yes
Initials YFB_cap_skin 0.000613 yes
Initials YFB_cap_tissue 0.000613 yes
Initials YFB_gill_tissue 0.000613 yes
Initials YFB_veil 0.000613 yes
Initials Pileal_Stipeal_center 0.001625 yes
Initials Pileal_Stipeal_shell 0.000613 yes
Initials DIF_stipe_center 0.006742 yes
Initials DIF_stipe_shell 0.053150 no
Initials DIF_stipe_skin 0.022369 yes
Initials DIF_cap_skin 0.000613 yes
Initials DIF_cap_tissue 0.000613 yes
Pileal_Stipeal_center DIF_gill_tissue 0.208222 no
Pileal_Stipeal_center YFB_stipe_center 0.538832 no
Pileal_Stipeal_center YFB_stipe_shell 0.122473 no
Pileal_Stipeal_center YFB_stipe_skin 0.776785 no
Pileal_Stipeal_center YFB_cap_skin 0.819899 no
Pileal_Stipeal_center YFB_cap_tissue 0.658255 no
Pileal_Stipeal_center YFB_gill_tissue 0.954295 no
Pileal_Stipeal_center YFB_veil 0.671979 no
Pileal_Stipeal_center Pileal_Stipeal_shell 0.430326 no
Pileal_Stipeal_center DIF_stipe_center 0.911483 no
Pileal_Stipeal_center DIF_stipe_shell 0.484724 no
Pileal_Stipeal_center DIF_stipe_skin 0.704900 no
Pileal_Stipeal_center DIF_cap_skin 0.520840 no
Pileal_Stipeal_center DIF_cap_tissue 0.603659 no
Pileal_Stipeal_shell DIF_gill_tissue 0.810085 no
Pileal_Stipeal_shell YFB_stipe_center 0.086585 no
Pileal_Stipeal_shell YFB_stipe_shell 0.009446 yes
Pileal_Stipeal_shell YFB_stipe_skin 0.205053 no
Pileal_Stipeal_shell YFB_cap_skin 0.705148 no
Pileal_Stipeal_shell YFB_cap_tissue 0.859742 no
Pileal_Stipeal_shell YFB_gill_tissue 0.525539 no
Pileal_Stipeal_shell YFB_veil 0.849475 no
Pileal_Stipeal_shell DIF_stipe_center 0.316965 no
Pileal_Stipeal_shell DIF_stipe_shell 0.070317 no
Pileal_Stipeal_shell DIF_stipe_skin 0.154391 no
Pileal_Stipeal_shell DIF_cap_skin 0.944247 no
Pileal_Stipeal_shell DIF_cap_tissue 0.901103 no
DIF_stipe_center DIF_gill_tissue 0.150034 no
DIF_stipe_center YFB_stipe_center 0.699763 no
DIF_stipe_center YFB_stipe_shell 0.217538 no
DIF_stipe_center YFB_stipe_skin 0.898345 no
DIF_stipe_center YFB_cap_skin 0.702303 no
DIF_stipe_center YFB_cap_tissue 0.530541 no
DIF_stipe_center YFB_gill_tissue 0.861885 no
DIF_stipe_center YFB_veil 0.545481 no
DIF_stipe_center DIF_stipe_shell 0.647532 no
DIF_stipe_center DIF_stipe_skin 0.840367 no
DIF_stipe_center DIF_cap_skin 0.403554 no
DIF_stipe_center DIF_cap_tissue 0.484152 no
DIF_stipe_shell DIF_gill_tissue 0.019442 yes
DIF_stipe_shell YFB_stipe_center 0.969262 no
DIF_stipe_shell YFB_stipe_shell 0.604493 no
DIF_stipe_shell YFB_stipe_skin 0.798669 no
DIF_stipe_shell YFB_cap_skin 0.261033 no
DIF_stipe_shell YFB_cap_tissue 0.152189 no
DIF_stipe_shell YFB_gill_tissue 0.423916 no
DIF_stipe_shell YFB_veil 0.161568 no
DIF_stipe_shell DIF_stipe_skin 0.862472 no
DIF_stipe_shell DIF_cap_skin 0.088442 no
DIF_stipe_shell DIF_cap_tissue 0.133000 no
DIF_stipe_skin DIF_gill_tissue 0.054776 no
DIF_stipe_skin YFB_stipe_center 0.896965 no
DIF_stipe_skin YFB_stipe_shell 0.403765 no
DIF_stipe_skin YFB_stipe_skin 0.956338 no
DIF_stipe_skin YFB_cap_skin 0.453160 no
DIF_stipe_skin YFB_cap_tissue 0.297304 no
DIF_stipe_skin YFB_gill_tissue 0.635988 no
DIF_stipe_skin YFB_veil 0.310012 no
DIF_stipe_skin DIF_cap_skin 0.196877 no
DIF_stipe_skin DIF_cap_tissue 0.259894 no
DIF_cap_skin DIF_gill_tissue 0.724325 no
DIF_cap_skin YFB_stipe_center 0.123805 no
DIF_cap_skin YFB_stipe_shell 0.011659 yes
DIF_cap_skin YFB_stipe_skin 0.265551 no
DIF_cap_skin YFB_cap_skin 0.786763 no
DIF_cap_skin YFB_cap_tissue 0.925187 no
DIF_cap_skin YFB_gill_tissue 0.618375 no
DIF_cap_skin YFB_veil 0.917413 no
DIF_cap_skin DIF_cap_tissue 0.961190 no
DIF_cap_tissue DIF_gill_tissue 0.671034 no
DIF_cap_tissue YFB_stipe_center 0.166714 no
DIF_cap_tissue YFB_stipe_shell 0.019987 yes
DIF_cap_tissue YFB_stipe_skin 0.330213 no
DIF_cap_tissue YFB_cap_skin 0.851457 no
DIF_cap_tissue YFB_cap_tissue 0.968938 no
DIF_cap_tissue YFB_gill_tissue 0.693959 no
DIF_cap_tissue YFB_veil 0.961870 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|016260
MDQLTDIPWNVSPRLTRDPTLEAFRPLLEKNRSLITEIAKKTFKYGDTDRHFLDIYWPPVQPTSSNGKTPILFYV
YGGGFVAGDRNSLPPFDLMLSSLGAFFARRGFITIIPDYQLAPEFKYPTPVEDILNAIKWTLNHGSELTTPTTVD
PDLDSLTLAGHSTGAVHIATLILHPTLIPLESDLRKKIKGVVLMSSPYHFPPITENQVFVAYYGTEKYAREKSPL
SLLLNWIDTNPKESLPNILLVEAQYEPDWIFDMGVDYQKVLEWHLGEAVPMIIGKRHNHISLICSPSSGEGEEWG
VETVEWIWKNLKGVSAVGSGISAGSGADTTKHATDDECSECHQRRNRSFTVQLGTESVSSKTFMTCINCGNNIQS
KSPVIFFGSTHIRRLPDAF*
Coding >AgabiH97|016260
ATGGATCAGCTCACGGATATCCCTTGGAATGTGAGCCCGAGACTTACTCGGGATCCCACACTGGAAGCTTTTCGA
CCATTGCTTGAGAAAAACCGATCGCTCATCACTGAGATTGCCAAAAAGACCTTCAAGTATGGAGATACTGATCGA
CACTTCCTCGACATCTATTGGCCTCCTGTTCAGCCAACGTCATCCAATGGTAAAACTCCGATACTATTCTATGTG
TACGGGGGAGGTTTCGTTGCCGGAGATCGCAACAGCCTTCCGCCGTTTGATCTCATGTTAAGCTCCCTTGGTGCT
TTCTTCGCAAGACGAGGATTCATCACGATCATTCCTGACTATCAACTCGCTCCGGAGTTCAAGTACCCAACGCCT
GTTGAGGACATTCTGAATGCGATCAAGTGGACGCTCAATCATGGATCGGAGCTCACAACGCCGACTACAGTTGAC
CCAGACCTCGATTCGTTGACTCTAGCAGGGCATTCGACTGGAGCAGTTCATATCGCAACGTTAATCCTTCATCCC
ACTTTGATTCCACTCGAGTCGGACCTACGCAAGAAAATCAAAGGTGTCGTCTTGATGTCAAGCCCCTACCATTTC
CCACCAATTACGGAAAATCAAGTCTTTGTGGCGTACTATGGCACAGAAAAATATGCGAGGGAAAAATCTCCCCTT
TCACTTCTCCTCAATTGGATCGACACAAATCCAAAGGAAAGCTTACCGAATATCTTATTAGTCGAAGCGCAATAC
GAGCCAGACTGGATTTTCGACATGGGTGTCGACTATCAGAAAGTTTTGGAATGGCATTTAGGTGAAGCTGTGCCG
ATGATTATTGGTAAAAGACATAATCACATCAGTCTAATTTGTTCGCCGTCGAGCGGAGAAGGAGAAGAATGGGGT
GTGGAAACTGTGGAGTGGATATGGAAGAACCTGAAGGGTGTGTCGGCGGTAGGTAGTGGGATTAGTGCGGGGAGT
GGAGCAGACACCACGAAACATGCGACAGACGATGAGTGTTCGGAATGTCACCAACGGAGGAATCGTTCATTCACA
GTTCAACTTGGCACGGAATCGGTTTCTTCAAAGACGTTCATGACATGTATTAATTGCGGAAATAATATTCAGAGT
AAATCTCCTGTCATATTTTTTGGAAGCACGCACATTAGACGTTTACCCGATGCTTTCTAA
Transcript >AgabiH97|016260
ATGGATCAGCTCACGGATATCCCTTGGAATGTGAGCCCGAGACTTACTCGGGATCCCACACTGGAAGCTTTTCGA
CCATTGCTTGAGAAAAACCGATCGCTCATCACTGAGATTGCCAAAAAGACCTTCAAGTATGGAGATACTGATCGA
CACTTCCTCGACATCTATTGGCCTCCTGTTCAGCCAACGTCATCCAATGGTAAAACTCCGATACTATTCTATGTG
TACGGGGGAGGTTTCGTTGCCGGAGATCGCAACAGCCTTCCGCCGTTTGATCTCATGTTAAGCTCCCTTGGTGCT
TTCTTCGCAAGACGAGGATTCATCACGATCATTCCTGACTATCAACTCGCTCCGGAGTTCAAGTACCCAACGCCT
GTTGAGGACATTCTGAATGCGATCAAGTGGACGCTCAATCATGGATCGGAGCTCACAACGCCGACTACAGTTGAC
CCAGACCTCGATTCGTTGACTCTAGCAGGGCATTCGACTGGAGCAGTTCATATCGCAACGTTAATCCTTCATCCC
ACTTTGATTCCACTCGAGTCGGACCTACGCAAGAAAATCAAAGGTGTCGTCTTGATGTCAAGCCCCTACCATTTC
CCACCAATTACGGAAAATCAAGTCTTTGTGGCGTACTATGGCACAGAAAAATATGCGAGGGAAAAATCTCCCCTT
TCACTTCTCCTCAATTGGATCGACACAAATCCAAAGGAAAGCTTACCGAATATCTTATTAGTCGAAGCGCAATAC
GAGCCAGACTGGATTTTCGACATGGGTGTCGACTATCAGAAAGTTTTGGAATGGCATTTAGGTGAAGCTGTGCCG
ATGATTATTGGTAAAAGACATAATCACATCAGTCTAATTTGTTCGCCGTCGAGCGGAGAAGGAGAAGAATGGGGT
GTGGAAACTGTGGAGTGGATATGGAAGAACCTGAAGGGTGTGTCGGCGGTAGGTAGTGGGATTAGTGCGGGGAGT
GGAGCAGACACCACGAAACATGCGACAGACGATGAGTGTTCGGAATGTCACCAACGGAGGAATCGTTCATTCACA
GTTCAACTTGGCACGGAATCGGTTTCTTCAAAGACGTTCATGACATGTATTAATTGCGGAAATAATATTCAGAGT
AAATCTCCTGTCATATTTTTTGGAAGCACGCACATTAGACGTTTACCCGATGCTTTCTAA
Gene >AgabiH97|016260
ATGGATCAGCTCACGGATATCCCTTGGAATGTGAGCCCGAGACTTACTCGGGATCCCAGTACGTGGGGCAATGGC
TATGGCCGACATCTATATCTTAACCATTTTCGTGACACAGCACTGGAAGCTTTTCGACCATTGCTTGAGAAAAAC
CGATCGCTCATCACTGAGATTGCCAAAAAGACCTTCAAGTATGGAGATACTGATCGACACTTCGTGCGTACTTGC
CTTAATCGAATCAAAGTTGCGAGCCTCAAATAGTTACATCATAAAGCTCGACATCTATTGGCCTCCTGTTCAGCC
AACGTCATCCAATGGTAAAACTCCGATACTATTCTATGTGTACGGGGGAGGTTTCGTTGCCGGAGATCGCAACAG
CCTTCCGCCGTTTGATCTCATGTTAAGCTCCCTTGGTGCTTTCTTCGCAAGACGAGGATTCATCACGATCATTCC
TGACTATCAACTCGCTCCGGAGTTCAAGTACCCAACGCCTGTTGAGGACATTCTGAATGCGATCAAGTGGACGCT
CAATCATGGATCGGAGCTCACAACGCCGACTACAGTTGACCCAGACCTCGATTCGTTGACTCTAGCAGGGCATTC
GACTGGAGCAGTTCATATCGCAACGTTAATCCTTCATCCCACTTTGATTCCACTCGAGTCGGACCTACGCAAGAA
AATCAAAGGTGTCGTCTTGATGTCAAGCCCCTACCATTTCCCACCAATTACGGAAAATCAAGTCTTTGTGGCGTA
CTATGGCACAGAAAAATATGCGAGGGAAAAATCTCCCCTTTCACTTCTCCTCAATTGGATCGACACAAATCCAAA
GGAAAGCTTACCGAATATCTTATTAGTCGAAGCGCAATACGAGCCAGACTGGATTTTCGACATGGGTGTCGACTA
TCAGAAAGTTTTGGAATGGCATTTAGGTGAAGCTGTGCCGATGATTATTGGTAAAAGACATAATCACATCAGTCT
AATTTGTTCGCCGTCGAGCGGAGAAGGAGAAGAATGGGGTGTGGAAACTGTGGAGTGGATATGGAAGAACCTGAA
GGTGAGGCATAGTTCCATACATTCAAATTTCTAGCGTGTACGACTAACAGCGCATTATTGTCAGGGTGTGTCGGC
GGTAGGTAGTGGGATTAGTGCGGGGAGTGGAGCAGACACCACGAAACATGCGACAGACGATGAGTGTTCGGAATG
TCACCAACGGAGGAATCGTTCATTCACAGTTCAACTTGGCACGGAATCGGTTTCTTCAAAGGTGGGCGTTATGCG
GACTGTACTAGTAATATTTATCAAACTTTTCGATTTTATTCAGACGTTCATGACGTAGGTGTAGCTGATATTTTT
TTCATAAACGTGTACTGATTTCAGCTTTAGATGTATTAATTGCGGAAATAAGTGGACCCGGATTTAATTTCCTCA
ACAGGAAAGAGCTCGAAGTATAATCTGTTGCCGTTCAAATCTTTTGTTTCTCGCTGGTGATTGTCGAAGAGACGA
AGCGAAGTATTCAGAGTAAATCTCCTGTGGGGTCCCTTTGATTCTACCGCAATCTATTTTTGTTGAAACTCTTCA
AAGGTCATATTTTTTGGAAGCACGCACATTAGACGTTTACCCGATGCTTTCTAA

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