Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|016140
Gene name
Locationscaffold_10:339852..340500
Strand-
Gene length (bp)648
Transcript length (bp)528
Coding sequence length (bp)528
Protein length (aa) 176

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 5 24 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|016140
MMCKAVLVSLFWFMIATMAAPTLLEANTLLQNGEEAQALNRYFKSLKTADHCNDGQVACLGSQILAKCQGAAWTI
TLSQCSGSQNCYALPSVSSSGTRLTCSSEKSAEGLFAATGAVGGIFGHPAHGSMDVVNQESLQHSSNELIAASPI
NQPFAPSLIVQGGSIGYIAQDLQLL*
Coding >AgabiH97|016140
ATGATGTGCAAAGCCGTGTTGGTTTCTCTGTTCTGGTTTATGATCGCGACGATGGCTGCTCCAACCTTGCTTGAG
GCAAACACTCTTTTACAAAATGGTGAAGAAGCCCAAGCATTGAATAGATACTTCAAGTCCTTGAAGACAGCTGAT
CACTGTAATGATGGTCAAGTTGCATGTCTTGGTAGCCAGATCTTGGCAAAGTGTCAAGGTGCTGCTTGGACGATT
ACCCTAAGCCAATGCTCTGGATCGCAAAACTGCTATGCCCTGCCGTCCGTTTCGAGCAGTGGGACGAGACTTACC
TGCTCAAGCGAAAAGAGTGCAGAGGGTCTCTTCGCTGCAACTGGCGCTGTCGGAGGCATCTTCGGACACCCAGCC
CACGGCAGTATGGATGTCGTCAACCAAGAATCACTACAACACAGTTCCAATGAACTTATCGCGGCTAGTCCGATT
AATCAACCCTTTGCTCCGTCTCTCATTGTTCAAGGAGGCTCCATTGGTTATATAGCGCAGGACTTGCAACTCTTG
TAA
Transcript >AgabiH97|016140
ATGATGTGCAAAGCCGTGTTGGTTTCTCTGTTCTGGTTTATGATCGCGACGATGGCTGCTCCAACCTTGCTTGAG
GCAAACACTCTTTTACAAAATGGTGAAGAAGCCCAAGCATTGAATAGATACTTCAAGTCCTTGAAGACAGCTGAT
CACTGTAATGATGGTCAAGTTGCATGTCTTGGTAGCCAGATCTTGGCAAAGTGTCAAGGTGCTGCTTGGACGATT
ACCCTAAGCCAATGCTCTGGATCGCAAAACTGCTATGCCCTGCCGTCCGTTTCGAGCAGTGGGACGAGACTTACC
TGCTCAAGCGAAAAGAGTGCAGAGGGTCTCTTCGCTGCAACTGGCGCTGTCGGAGGCATCTTCGGACACCCAGCC
CACGGCAGTATGGATGTCGTCAACCAAGAATCACTACAACACAGTTCCAATGAACTTATCGCGGCTAGTCCGATT
AATCAACCCTTTGCTCCGTCTCTCATTGTTCAAGGAGGCTCCATTGGTTATATAGCGCAGGACTTGCAACTCTTG
TAA
Gene >AgabiH97|016140
ATGATGTGCAAAGCCGTGTTGGTTTCTCTGTTCTGGTTTATGATCGCGACGATGGCTGCTCCAACCTTGCTTGAG
GCAAACACTCTTTTACAAAATGGTGAAGAAGCCCAAGCATTGAATAGATACTTCAAGTCCTTGAAGACAGCTGAT
CACTGTAATGGTATGTTATGGATTTTCTTACCTTTGATATATCTGTGGGCTCAATATTCCTACCATTGTATAGAT
GGTCAAGTTGCATGTCTTGGTAGCCAGATCTTGGCAAAGTGTCAAGGTGCTGCTTGGACGATTACCCTAAGCCAA
TGCTCTGGATCGCAAAACTGCTATGCCCTGCCGTCCGTTTCGAGCAGTGGGACGGTAAGATTGTCATGCTACCCT
AGACTTGACAATTTACTGATGCCATTTATTCGGTAGAGACTTACCTGCTCAAGCGAAAAGAGTGCAGAGGGTCTC
TTCGCTGCAACTGGCGCTGTCGGAGGCATCTTCGGACACCCAGCCCACGGCAGTATGGATGTCGTCAACCAAGAA
TCACTACAACACAGTTCCAATGAACTTATCGCGGCTAGTCCGATTAATCAACCCTTTGCTCCGTCTCTCATTGTT
CAAGGAGGCTCCATTGGTTATATAGCGCAGGACTTGCAACTCTTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail