© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|016050 |
| Gene name | |
| Location | scaffold_10:318270..319880 |
| Strand | + |
| Gene length (bp) | 1610 |
| Transcript length (bp) | 1554 |
| Coding sequence length (bp) | 1554 |
| Protein length (aa) | 518 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 23 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 215 | 237 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Casing | Casing mycelium | 121.97 | 72.56 | 171.38 |
| Initials | Initials knots | 107.44 | 64.08 | 150.81 |
| Pileal_Stipeal_center | Stage I stipe center | 160.18 | 93.98 | 226.38 |
| Pileal_Stipeal_shell | Stage I stipe shell | 98.70 | 58.84 | 138.56 |
| DIF_stipe_center | Stage II stipe center | 174.87 | 102.00 | 247.75 |
| DIF_stipe_shell | Stage II stipe shell | 189.45 | 109.69 | 269.21 |
| DIF_stipe_skin | Stage II stipe skin | 148.24 | 87.33 | 209.14 |
| DIF_cap_skin | Stage II cap skin | 116.97 | 69.71 | 164.22 |
| DIF_cap_tissue | Stage II cap tissue | 143.46 | 84.52 | 202.40 |
| DIF_gill_tissue | Stage II gill tissue | 126.75 | 74.78 | 178.73 |
| YFB_stipe_center | Young fruiting body stipe center | 186.68 | 107.74 | 265.62 |
| YFB_stipe_shell | Young fruiting body stipe shell | 212.58 | 121.16 | 303.99 |
| YFB_stipe_skin | Young fruiting body stipe skin | 152.73 | 89.83 | 215.62 |
| YFB_cap_skin | Young fruiting body cap skin | 125.32 | 74.50 | 176.14 |
| YFB_cap_tissue | Young fruiting body cap tissue | 211.70 | 121.31 | 302.09 |
| YFB_gill_tissue | Young fruiting body gill tissue | 112.48 | 67.10 | 157.86 |
| YFB_veil | Young fruiting body veil | 115.13 | 68.70 | 161.55 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Casing | DIF_gill_tissue | 0.944146 | no |
| Casing | YFB_stipe_center | 0.144159 | no |
| Casing | YFB_stipe_shell | 0.051932 | no |
| Casing | YFB_stipe_skin | 0.539074 | no |
| Casing | YFB_cap_skin | 0.961870 | no |
| Casing | YFB_cap_tissue | 0.050706 | no |
| Casing | YFB_gill_tissue | 0.869333 | no |
| Casing | YFB_veil | 0.911933 | no |
| Casing | Initials | 0.773287 | no |
| Casing | Pileal_Stipeal_center | 0.420211 | no |
| Casing | Pileal_Stipeal_shell | 0.568328 | no |
| Casing | DIF_stipe_center | 0.238319 | no |
| Casing | DIF_stipe_shell | 0.125429 | no |
| Casing | DIF_stipe_skin | 0.616287 | no |
| Casing | DIF_cap_skin | 0.937209 | no |
| Casing | DIF_cap_tissue | 0.694670 | no |
| DIF_gill_tissue | YFB_stipe_center | 0.203999 | no |
| DIF_gill_tissue | YFB_stipe_shell | 0.071041 | no |
| DIF_gill_tissue | YFB_stipe_skin | 0.638541 | no |
| DIF_gill_tissue | YFB_cap_skin | 0.984314 | no |
| DIF_gill_tissue | YFB_cap_tissue | 0.069952 | no |
| DIF_gill_tissue | YFB_gill_tissue | 0.789486 | no |
| DIF_gill_tissue | YFB_veil | 0.840342 | no |
| YFB_stipe_center | YFB_stipe_shell | 0.775524 | no |
| YFB_stipe_center | YFB_stipe_skin | 0.606067 | no |
| YFB_stipe_center | YFB_cap_skin | 0.182182 | no |
| YFB_stipe_center | YFB_cap_tissue | 0.789222 | no |
| YFB_stipe_center | YFB_gill_tissue | 0.071782 | no |
| YFB_stipe_center | YFB_veil | 0.083843 | no |
| YFB_stipe_shell | YFB_stipe_skin | 0.318332 | no |
| YFB_stipe_shell | YFB_cap_skin | 0.061086 | no |
| YFB_stipe_shell | YFB_cap_tissue | 0.993704 | no |
| YFB_stipe_shell | YFB_gill_tissue | 0.015242 | yes |
| YFB_stipe_shell | YFB_veil | 0.022631 | yes |
| YFB_stipe_skin | YFB_cap_skin | 0.603469 | no |
| YFB_stipe_skin | YFB_cap_tissue | 0.327110 | no |
| YFB_stipe_skin | YFB_gill_tissue | 0.348230 | no |
| YFB_stipe_skin | YFB_veil | 0.397993 | no |
| YFB_cap_skin | YFB_cap_tissue | 0.059712 | no |
| YFB_cap_skin | YFB_gill_tissue | 0.813241 | no |
| YFB_cap_skin | YFB_veil | 0.861967 | no |
| YFB_cap_tissue | YFB_gill_tissue | 0.019987 | yes |
| YFB_cap_tissue | YFB_veil | 0.026710 | yes |
| YFB_gill_tissue | YFB_veil | 0.966912 | no |
| Initials | DIF_gill_tissue | 0.685681 | no |
| Initials | YFB_stipe_center | 0.042041 | yes |
| Initials | YFB_stipe_shell | 0.011041 | yes |
| Initials | YFB_stipe_skin | 0.256658 | no |
| Initials | YFB_cap_skin | 0.707297 | no |
| Initials | YFB_cap_tissue | 0.011041 | yes |
| Initials | YFB_gill_tissue | 0.929951 | no |
| Initials | YFB_veil | 0.890791 | no |
| Initials | Pileal_Stipeal_center | 0.177565 | no |
| Initials | Pileal_Stipeal_shell | 0.859799 | no |
| Initials | DIF_stipe_center | 0.082633 | no |
| Initials | DIF_stipe_shell | 0.037140 | yes |
| Initials | DIF_stipe_skin | 0.310391 | no |
| Initials | DIF_cap_skin | 0.858297 | no |
| Initials | DIF_cap_tissue | 0.381485 | no |
| Pileal_Stipeal_center | DIF_gill_tissue | 0.524695 | no |
| Pileal_Stipeal_center | YFB_stipe_center | 0.722335 | no |
| Pileal_Stipeal_center | YFB_stipe_shell | 0.422809 | no |
| Pileal_Stipeal_center | YFB_stipe_skin | 0.930322 | no |
| Pileal_Stipeal_center | YFB_cap_skin | 0.487712 | no |
| Pileal_Stipeal_center | YFB_cap_tissue | 0.431258 | no |
| Pileal_Stipeal_center | YFB_gill_tissue | 0.252728 | no |
| Pileal_Stipeal_center | YFB_veil | 0.295714 | no |
| Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.080883 | no |
| Pileal_Stipeal_center | DIF_stipe_center | 0.859779 | no |
| Pileal_Stipeal_center | DIF_stipe_shell | 0.685225 | no |
| Pileal_Stipeal_center | DIF_stipe_skin | 0.880313 | no |
| Pileal_Stipeal_center | DIF_cap_skin | 0.327207 | no |
| Pileal_Stipeal_center | DIF_cap_tissue | 0.814779 | no |
| Pileal_Stipeal_shell | DIF_gill_tissue | 0.483508 | no |
| Pileal_Stipeal_shell | YFB_stipe_center | 0.014374 | yes |
| Pileal_Stipeal_shell | YFB_stipe_shell | 0.003365 | yes |
| Pileal_Stipeal_shell | YFB_stipe_skin | 0.128073 | no |
| Pileal_Stipeal_shell | YFB_cap_skin | 0.498965 | no |
| Pileal_Stipeal_shell | YFB_cap_tissue | 0.002951 | yes |
| Pileal_Stipeal_shell | YFB_gill_tissue | 0.761216 | no |
| Pileal_Stipeal_shell | YFB_veil | 0.707811 | no |
| Pileal_Stipeal_shell | DIF_stipe_center | 0.032266 | yes |
| Pileal_Stipeal_shell | DIF_stipe_shell | 0.015242 | yes |
| Pileal_Stipeal_shell | DIF_stipe_skin | 0.165026 | no |
| Pileal_Stipeal_shell | DIF_cap_skin | 0.665887 | no |
| Pileal_Stipeal_shell | DIF_cap_tissue | 0.218082 | no |
| DIF_stipe_center | DIF_gill_tissue | 0.320910 | no |
| DIF_stipe_center | YFB_stipe_center | 0.901835 | no |
| DIF_stipe_center | YFB_stipe_shell | 0.617829 | no |
| DIF_stipe_center | YFB_stipe_skin | 0.752734 | no |
| DIF_stipe_center | YFB_cap_skin | 0.281547 | no |
| DIF_stipe_center | YFB_cap_tissue | 0.632819 | no |
| DIF_stipe_center | YFB_gill_tissue | 0.121114 | no |
| DIF_stipe_center | YFB_veil | 0.141536 | no |
| DIF_stipe_center | DIF_stipe_shell | 0.873249 | no |
| DIF_stipe_center | DIF_stipe_skin | 0.685194 | no |
| DIF_stipe_center | DIF_cap_skin | 0.168544 | no |
| DIF_stipe_center | DIF_cap_tissue | 0.604397 | no |
| DIF_stipe_shell | DIF_gill_tissue | 0.183309 | no |
| DIF_stipe_shell | YFB_stipe_center | 0.979259 | no |
| DIF_stipe_shell | YFB_stipe_shell | 0.807785 | no |
| DIF_stipe_shell | YFB_stipe_skin | 0.564806 | no |
| DIF_stipe_shell | YFB_cap_skin | 0.159322 | no |
| DIF_stipe_shell | YFB_cap_tissue | 0.819195 | no |
| DIF_stipe_shell | YFB_gill_tissue | 0.062038 | no |
| DIF_stipe_shell | YFB_veil | 0.074840 | no |
| DIF_stipe_shell | DIF_stipe_skin | 0.496358 | no |
| DIF_stipe_shell | DIF_cap_skin | 0.087755 | no |
| DIF_stipe_shell | DIF_cap_tissue | 0.415145 | no |
| DIF_stipe_skin | DIF_gill_tissue | 0.712265 | no |
| DIF_stipe_skin | YFB_stipe_center | 0.531625 | no |
| DIF_stipe_skin | YFB_stipe_shell | 0.258299 | no |
| DIF_stipe_skin | YFB_stipe_skin | 0.957899 | no |
| DIF_stipe_skin | YFB_cap_skin | 0.680313 | no |
| DIF_stipe_skin | YFB_cap_tissue | 0.264618 | no |
| DIF_stipe_skin | YFB_gill_tissue | 0.411711 | no |
| DIF_stipe_skin | YFB_veil | 0.467679 | no |
| DIF_stipe_skin | DIF_cap_skin | 0.504198 | no |
| DIF_stipe_skin | DIF_cap_tissue | 0.954808 | no |
| DIF_cap_skin | DIF_gill_tissue | 0.872362 | no |
| DIF_cap_skin | YFB_stipe_center | 0.098108 | no |
| DIF_cap_skin | YFB_stipe_shell | 0.028675 | yes |
| DIF_cap_skin | YFB_stipe_skin | 0.437934 | no |
| DIF_cap_skin | YFB_cap_skin | 0.891680 | no |
| DIF_cap_skin | YFB_cap_tissue | 0.026215 | yes |
| DIF_cap_skin | YFB_gill_tissue | 0.942152 | no |
| DIF_cap_skin | YFB_veil | 0.977236 | no |
| DIF_cap_skin | DIF_cap_tissue | 0.592238 | no |
| DIF_cap_tissue | DIF_gill_tissue | 0.789696 | no |
| DIF_cap_tissue | YFB_stipe_center | 0.454843 | no |
| DIF_cap_tissue | YFB_stipe_shell | 0.217311 | no |
| DIF_cap_tissue | YFB_stipe_skin | 0.906826 | no |
| DIF_cap_tissue | YFB_cap_skin | 0.757854 | no |
| DIF_cap_tissue | YFB_cap_tissue | 0.217311 | no |
| DIF_cap_tissue | YFB_gill_tissue | 0.494252 | no |
| DIF_cap_tissue | YFB_veil | 0.549486 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|016050 MLLMLSPAVMVLLTFFIEGARSQLPDQEFTPTANPAPLPSSTQVLFLQNFNFPLTTCTVHNVSWSYNGLDTRLDI AATNVNVPQGPPPAPFPSRPVVTFTDDGVVRAQRPRAPDVINNFIARDLEASALHIPWKVSVPSGWYSIVVANGV ERLDQTDPFFVQDGTDTSCLLGGHTSSSTSSPSPSSSNPASGAPQETVSPPAPVASTSKDNHVGIIIGVVAGVVV ALIVILIAFLCLRRRKHAQERPASVLPGAGLRRGWGGLGSFSSIHSVKPAPTSRDLAVTTREHTRHTEERAPRSS VSTPFSLEEKVSTSPVFSSRNPFDDTEGGITLATLPSNGRRSSSARSSLQQYPPRHNPSISAIVNSYDLETSTRS TDLSSSRHNSLSTAEMMPSYSSSSSSSASPTERNKAEHGSSGSQSGVRKTPRKPVPAYDPAVHTSSTPSPLVENT SPIALTPGTPIVSSISGQGHYAKKSQYAASNPEGIDRLPRKSSFGPGGIEGKPIHYLIPDMPLPKAN* |
| Coding | >AgabiH97|016050 ATGCTGCTCATGTTGTCGCCTGCTGTTATGGTGCTCCTAACCTTCTTCATTGAAGGTGCACGCAGTCAGCTTCCA GATCAAGAATTTACACCTACTGCGAACCCTGCACCTCTACCGTCGTCAACACAGGTCCTCTTCTTGCAAAACTTT AATTTTCCACTGACCACCTGCACGGTTCACAACGTCTCCTGGTCGTACAATGGACTAGATACACGGCTTGATATT GCCGCAACCAACGTCAATGTCCCACAGGGGCCACCTCCTGCACCGTTCCCCTCGCGGCCTGTAGTTACCTTTACC GATGATGGCGTCGTGCGTGCACAGCGCCCGCGCGCTCCTGATGTCATCAACAACTTTATCGCTCGAGACTTGGAA GCCTCAGCCTTACATATACCTTGGAAAGTCAGTGTGCCATCTGGCTGGTATAGTATTGTCGTGGCAAACGGAGTT GAACGATTGGATCAGACTGATCCCTTTTTTGTGCAAGACGGCACGGATACCTCATGCCTCCTGGGCGGTCATACG AGTTCTTCTACCTCAAGTCCAAGCCCATCGTCGTCAAACCCAGCTTCAGGAGCTCCCCAAGAAACTGTCAGCCCT CCCGCTCCTGTTGCCTCCACCTCCAAAGACAATCATGTAGGCATCATTATTGGGGTTGTAGCAGGTGTTGTGGTT GCCTTGATCGTCATACTCATCGCTTTCCTCTGCCTACGAAGAAGAAAACACGCCCAAGAGAGGCCTGCTAGCGTA CTTCCAGGAGCAGGACTTCGTCGAGGCTGGGGTGGACTGGGTTCTTTCAGTTCAATTCATTCTGTCAAGCCAGCT CCTACTTCTCGTGACTTGGCGGTCACCACACGTGAACACACTCGCCACACCGAGGAGAGAGCACCAAGAAGCAGC GTTTCCACGCCTTTTTCTTTGGAGGAAAAGGTCTCCACTTCTCCCGTCTTTAGCTCAAGAAACCCATTTGATGAT ACTGAGGGAGGTATCACCCTGGCGACTTTGCCGTCGAATGGCCGCAGATCTAGTTCTGCGAGATCGTCCCTTCAA CAGTATCCACCCCGACATAATCCATCGATTAGTGCGATTGTAAATTCATACGACCTCGAAACAAGCACTCGTTCC ACCGATTTGTCGTCCTCACGACATAACTCGCTATCGACTGCCGAGATGATGCCATCATACTCTTCTTCTTCTTCT TCCAGTGCCTCGCCTACCGAACGGAACAAGGCCGAACATGGATCTTCAGGTTCGCAATCGGGTGTGAGGAAGACT CCGCGCAAGCCAGTCCCTGCATACGACCCTGCCGTTCACACTTCAAGTACCCCGTCTCCATTGGTGGAAAATACT TCTCCGATAGCCCTTACCCCAGGTACTCCAATTGTGTCTTCGATCTCGGGTCAGGGTCATTACGCCAAGAAGTCG CAATATGCTGCGAGCAACCCGGAAGGTATTGATAGGCTACCTCGCAAGAGTAGCTTTGGTCCTGGCGGCATCGAA GGGAAACCTATACATTATCTGATACCTGATATGCCCCTCCCAAAGGCGAATTGA |
| Transcript | >AgabiH97|016050 ATGCTGCTCATGTTGTCGCCTGCTGTTATGGTGCTCCTAACCTTCTTCATTGAAGGTGCACGCAGTCAGCTTCCA GATCAAGAATTTACACCTACTGCGAACCCTGCACCTCTACCGTCGTCAACACAGGTCCTCTTCTTGCAAAACTTT AATTTTCCACTGACCACCTGCACGGTTCACAACGTCTCCTGGTCGTACAATGGACTAGATACACGGCTTGATATT GCCGCAACCAACGTCAATGTCCCACAGGGGCCACCTCCTGCACCGTTCCCCTCGCGGCCTGTAGTTACCTTTACC GATGATGGCGTCGTGCGTGCACAGCGCCCGCGCGCTCCTGATGTCATCAACAACTTTATCGCTCGAGACTTGGAA GCCTCAGCCTTACATATACCTTGGAAAGTCAGTGTGCCATCTGGCTGGTATAGTATTGTCGTGGCAAACGGAGTT GAACGATTGGATCAGACTGATCCCTTTTTTGTGCAAGACGGCACGGATACCTCATGCCTCCTGGGCGGTCATACG AGTTCTTCTACCTCAAGTCCAAGCCCATCGTCGTCAAACCCAGCTTCAGGAGCTCCCCAAGAAACTGTCAGCCCT CCCGCTCCTGTTGCCTCCACCTCCAAAGACAATCATGTAGGCATCATTATTGGGGTTGTAGCAGGTGTTGTGGTT GCCTTGATCGTCATACTCATCGCTTTCCTCTGCCTACGAAGAAGAAAACACGCCCAAGAGAGGCCTGCTAGCGTA CTTCCAGGAGCAGGACTTCGTCGAGGCTGGGGTGGACTGGGTTCTTTCAGTTCAATTCATTCTGTCAAGCCAGCT CCTACTTCTCGTGACTTGGCGGTCACCACACGTGAACACACTCGCCACACCGAGGAGAGAGCACCAAGAAGCAGC GTTTCCACGCCTTTTTCTTTGGAGGAAAAGGTCTCCACTTCTCCCGTCTTTAGCTCAAGAAACCCATTTGATGAT ACTGAGGGAGGTATCACCCTGGCGACTTTGCCGTCGAATGGCCGCAGATCTAGTTCTGCGAGATCGTCCCTTCAA CAGTATCCACCCCGACATAATCCATCGATTAGTGCGATTGTAAATTCATACGACCTCGAAACAAGCACTCGTTCC ACCGATTTGTCGTCCTCACGACATAACTCGCTATCGACTGCCGAGATGATGCCATCATACTCTTCTTCTTCTTCT TCCAGTGCCTCGCCTACCGAACGGAACAAGGCCGAACATGGATCTTCAGGTTCGCAATCGGGTGTGAGGAAGACT CCGCGCAAGCCAGTCCCTGCATACGACCCTGCCGTTCACACTTCAAGTACCCCGTCTCCATTGGTGGAAAATACT TCTCCGATAGCCCTTACCCCAGGTACTCCAATTGTGTCTTCGATCTCGGGTCAGGGTCATTACGCCAAGAAGTCG CAATATGCTGCGAGCAACCCGGAAGGTATTGATAGGCTACCTCGCAAGAGTAGCTTTGGTCCTGGCGGCATCGAA GGGAAACCTATACATTATCTGATACCTGATATGCCCCTCCCAAAGGCGAATTGA |
| Gene | >AgabiH97|016050 ATGCTGCTCATGTTGTCGCCTGCTGTTATGGTGCTCCTAACCTTCTTCATTGAAGGTGCACGCAGTCAGCTTCCA GATCAAGAATGTAAATTTTTTTTCATCATTTTCAATGCCGTCGTCGTCTTATGCCTATTTTCCTAGTTACACCTA CTGCGAACCCTGCACCTCTACCGTCGTCAACACAGGTCCTCTTCTTGCAAAACTTTAATTTTCCACTGACCACCT GCACGGTTCACAACGTCTCCTGGTCGTACAATGGACTAGATACACGGCTTGATATTGCCGCAACCAACGTCAATG TCCCACAGGGGCCACCTCCTGCACCGTTCCCCTCGCGGCCTGTAGTTACCTTTACCGATGATGGCGTCGTGCGTG CACAGCGCCCGCGCGCTCCTGATGTCATCAACAACTTTATCGCTCGAGACTTGGAAGCCTCAGCCTTACATATAC CTTGGAAAGTCAGTGTGCCATCTGGCTGGTATAGTATTGTCGTGGCAAACGGAGTTGAACGATTGGATCAGACTG ATCCCTTTTTTGTGCAAGACGGCACGGATACCTCATGCCTCCTGGGCGGTCATACGAGTTCTTCTACCTCAAGTC CAAGCCCATCGTCGTCAAACCCAGCTTCAGGAGCTCCCCAAGAAACTGTCAGCCCTCCCGCTCCTGTTGCCTCCA CCTCCAAAGACAATCATGTAGGCATCATTATTGGGGTTGTAGCAGGTGTTGTGGTTGCCTTGATCGTCATACTCA TCGCTTTCCTCTGCCTACGAAGAAGAAAACACGCCCAAGAGAGGCCTGCTAGCGTACTTCCAGGAGCAGGACTTC GTCGAGGCTGGGGTGGACTGGGTTCTTTCAGTTCAATTCATTCTGTCAAGCCAGCTCCTACTTCTCGTGACTTGG CGGTCACCACACGTGAACACACTCGCCACACCGAGGAGAGAGCACCAAGAAGCAGCGTTTCCACGCCTTTTTCTT TGGAGGAAAAGGTCTCCACTTCTCCCGTCTTTAGCTCAAGAAACCCATTTGATGATACTGAGGGAGGTATCACCC TGGCGACTTTGCCGTCGAATGGCCGCAGATCTAGTTCTGCGAGATCGTCCCTTCAACAGTATCCACCCCGACATA ATCCATCGATTAGTGCGATTGTAAATTCATACGACCTCGAAACAAGCACTCGTTCCACCGATTTGTCGTCCTCAC GACATAACTCGCTATCGACTGCCGAGATGATGCCATCATACTCTTCTTCTTCTTCTTCCAGTGCCTCGCCTACCG AACGGAACAAGGCCGAACATGGATCTTCAGGTTCGCAATCGGGTGTGAGGAAGACTCCGCGCAAGCCAGTCCCTG CATACGACCCTGCCGTTCACACTTCAAGTACCCCGTCTCCATTGGTGGAAAATACTTCTCCGATAGCCCTTACCC CAGGTACTCCAATTGTGTCTTCGATCTCGGGTCAGGGTCATTACGCCAAGAAGTCGCAATATGCTGCGAGCAACC CGGAAGGTATTGATAGGCTACCTCGCAAGAGTAGCTTTGGTCCTGGCGGCATCGAAGGGAAACCTATACATTATC TGATACCTGATATGCCCCTCCCAAAGGCGAATTGA |