Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|015950
Gene name
Locationscaffold_10:287716..290617
Strand-
Gene length (bp)2901
Transcript length (bp)2793
Coding sequence length (bp)2793
Protein length (aa) 931

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00010 HLH Helix-loop-helix DNA-binding domain 7.7E-11 192 300

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0046983 protein dimerization activity Yes
GO:0003674 molecular_function No
GO:0005515 protein binding No
GO:0005488 binding No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus|Endoplasmic reticulum 0.1123 0.5833 0.0191 0.0064 0.2699 0.0698 0.7799 0.1692 0.3116 0.0383

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Helix-loop-helix

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Orthologs

Orthofinder run ID1
Orthogroup1015
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|015950
Agaricus bisporus var bisporus H97 AgabiH97|015950 (this protein)
Rhodonia placenta FPRL280 RhoplFPRL280|34_6

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|015950
MEEIVTPLEASDPLRLLIHNTTMEEPADWSSLSALWPDDCIEPSALCLPAFDTDSFDLSADMLAAQFLNDSAMLI
EPVDTKPRRLSVTSSSSDSTGGPTFSPLPESPGYTSDSSQESGAVFDPAMELAQRVRELAGVMFAVPTSGPPQSS
EPLPAPTPPPPAPPSSDISTMATAHPIIPTSIVNLTTTTRPKTSHTTIERRYRTNLNARIQSLRMAVPALRVLED
KDSGKKIKKNLKGDVIIKSSSSPTPITTGSSPSPSNPYGEVDVIDERGYVDGVKVARKCSKANVLGKAVEYIRVL
KRREMRLKNEQEGLKSLICGLVGGQALLREWEKEWRLRFGGEEKDEVGGDFNIPGGGELDDDEEEEDMDDDEDGE
EGVGKKRKRAKLEVRKSQQPKTTPVIQNVVLGVDGQPEKRKRGRPRKVPLPPSPVTPEQQQQPQPQQYLLAVFAL
FSFFNSPLTTNNAHHQTHPHQGHVLSSVPLDYTPEIVAQFTPLSTWRDWVQLLHLGITVLLFLSVVVRMVGGRIG
RSKKNEETQKNIEEIILGKQSIPSLTSSIKLYRSTMNSPIMKALFLYTLASNSSGFIKRMIKSWARSIWNTASTT
AMAKKELVVLSLGIDQIYDGFMSGVKLEIAKMRKYDSDDEEEGDLVIDVLARRVIEMKSSKVLGKTFVKEVIGCD
EKKEEGEKREGESGKELKLLSEASRELGGPVEVLVRNVEKAVVGGVNGLINDEEEEEEVVMGWKKIEDNVDDAED
SDSMLSSSTISSATATSSTAFSEDEDEDDSYHHSSTTPFTILQALILYRSIFSSSSKSTKLNPPQISVEPPTPTT
PKAVLRRLNTLSSVQQQQQQVQRQVQEVEEEERRRRRMYALRRLLGSRVFEKCVQGDDDDSQETDKERGEGVEGE
REDMTTMMEDARDRVVDMLVDAERGRRMNY*
Coding >AgabiH97|015950
ATGGAAGAAATTGTGACGCCGCTGGAGGCCTCTGACCCGCTCAGGCTGCTCATCCACAACACAACCATGGAAGAA
CCTGCTGACTGGTCTTCTCTCTCTGCTCTTTGGCCCGACGACTGCATCGAGCCCAGCGCACTTTGTCTGCCCGCT
TTCGATACCGACTCTTTCGACCTCTCTGCAGACATGCTCGCGGCTCAGTTTCTCAATGACAGCGCCATGCTCATC
GAACCCGTTGATACCAAGCCGAGGAGGCTCAGTGTGACCTCCAGCTCTTCGGATTCTACTGGTGGTCCCACCTTT
TCTCCCTTGCCAGAGAGTCCTGGATACACTAGTGATTCGTCCCAGGAATCAGGAGCCGTCTTTGATCCTGCTATG
GAGCTGGCTCAGCGTGTGCGAGAATTAGCTGGTGTTATGTTTGCCGTACCTACGAGCGGACCTCCTCAATCAAGT
GAACCTTTACCTGCGCCTACACCACCACCACCAGCACCTCCCTCGTCTGATATCTCTACCATGGCAACAGCTCAC
CCCATTATACCAACATCAATCGTCAATTTGACAACTACAACACGGCCCAAGACGAGTCATACTACCATTGAAAGA
CGGTACCGCACGAATTTGAATGCACGGATTCAGTCTTTACGTATGGCCGTACCTGCTCTACGTGTCCTAGAGGAC
AAAGATTCGGGAAAGAAGATCAAGAAGAATCTGAAAGGAGATGTTATCATTAAATCTTCTTCCTCCCCCACTCCT
ATTACTACCGGAAGTTCTCCATCTCCGTCAAATCCTTACGGCGAAGTTGATGTTATAGACGAACGAGGTTACGTC
GACGGAGTCAAAGTCGCGCGAAAATGCTCCAAAGCGAACGTTCTAGGAAAAGCCGTTGAATATATTAGAGTTTTG
AAACGTAGAGAAATGAGGTTGAAGAATGAGCAGGAAGGGCTCAAGAGTTTGATTTGTGGTTTGGTGGGTGGTCAG
GCGTTGTTGAGAGAGTGGGAGAAGGAATGGAGGTTGAGGTTTGGTGGAGAGGAGAAGGATGAGGTTGGAGGTGAT
TTCAATATTCCCGGTGGAGGAGAGCTGGATGACGATGAGGAGGAGGAGGATATGGATGATGATGAAGATGGAGAA
GAAGGCGTCGGAAAGAAGAGGAAGAGAGCTAAACTCGAGGTCAGGAAGAGTCAACAACCAAAGACGACACCGGTG
ATCCAGAATGTTGTCTTGGGCGTGGATGGTCAACCGGAAAAGAGGAAGAGAGGCAGACCTAGGAAAGTACCTCTG
CCCCCATCTCCAGTTACTCCCGAACAACAACAGCAACCTCAACCTCAGCAATACCTACTAGCGGTTTTTGCTCTA
TTCTCGTTCTTCAATTCACCTCTCACTACCAATAACGCTCATCATCAAACCCATCCTCATCAAGGACATGTGTTA
AGCTCAGTACCGCTTGATTATACCCCAGAAATTGTTGCTCAATTCACTCCTCTGTCGACTTGGAGAGATTGGGTA
CAACTTTTGCACCTCGGTATAACGGTTTTGCTGTTTTTGAGTGTTGTTGTCAGGATGGTCGGTGGGCGGATAGGA
AGGTCGAAGAAAAATGAGGAAACTCAGAAGAATATCGAGGAAATTATACTTGGAAAACAATCTATACCTTCTCTC
ACTTCATCAATCAAGTTATACCGCTCAACGATGAATTCTCCGATTATGAAGGCTTTGTTTTTGTACACTCTCGCT
TCTAATTCCTCTGGATTCATTAAACGTATGATCAAGTCATGGGCGAGGAGTATCTGGAATACAGCAAGCACCACT
GCAATGGCGAAGAAGGAATTGGTTGTGTTGAGTCTGGGCATCGATCAAATTTATGATGGATTTATGTCTGGTGTC
AAACTCGAAATCGCGAAAATGCGAAAATATGATTCAGATGACGAGGAAGAAGGGGACTTGGTGATTGACGTTTTG
GCTCGACGGGTTATTGAAATGAAGTCGAGCAAGGTATTGGGAAAGACGTTTGTTAAGGAAGTTATTGGGTGTGAT
GAAAAGAAGGAGGAGGGGGAGAAGAGGGAGGGGGAGTCTGGAAAGGAATTAAAGTTGTTGAGTGAGGCATCGAGA
GAATTGGGTGGGCCAGTGGAAGTTTTGGTGCGGAATGTTGAGAAAGCGGTTGTTGGTGGGGTGAATGGGTTGATA
AATGATGAGGAGGAGGAGGAGGAGGTTGTGATGGGGTGGAAGAAGATTGAGGATAATGTGGATGATGCGGAAGAT
TCGGATTCGATGCTTTCCTCAAGTACGATTTCGAGTGCGACTGCGACTTCGAGTACTGCGTTTTCGGAAGATGAA
GATGAAGATGACAGTTATCATCATTCTTCTACTACTCCGTTTACGATCCTTCAGGCATTGATCTTATACCGATCT
ATCTTCTCTTCTTCTTCCAAGTCAACCAAATTGAACCCTCCGCAAATTTCTGTCGAGCCACCCACACCTACAACT
CCGAAAGCTGTTTTACGTCGGTTAAATACTTTGAGTAGTGTTCAACAGCAACAGCAACAAGTACAACGACAAGTA
CAAGAAGTGGAGGAGGAGGAGAGGAGGAGGAGACGGATGTATGCGCTTAGACGATTATTAGGGAGTCGTGTTTTT
GAGAAATGCGTTCAAGGTGATGATGATGATTCTCAAGAAACGGACAAAGAAAGAGGAGAAGGAGTTGAGGGAGAG
AGAGAGGACATGACGACGATGATGGAAGATGCGAGAGATCGAGTCGTGGATATGTTGGTTGATGCTGAGAGGGGT
AGGAGGATGAACTATTAG
Transcript >AgabiH97|015950
ATGGAAGAAATTGTGACGCCGCTGGAGGCCTCTGACCCGCTCAGGCTGCTCATCCACAACACAACCATGGAAGAA
CCTGCTGACTGGTCTTCTCTCTCTGCTCTTTGGCCCGACGACTGCATCGAGCCCAGCGCACTTTGTCTGCCCGCT
TTCGATACCGACTCTTTCGACCTCTCTGCAGACATGCTCGCGGCTCAGTTTCTCAATGACAGCGCCATGCTCATC
GAACCCGTTGATACCAAGCCGAGGAGGCTCAGTGTGACCTCCAGCTCTTCGGATTCTACTGGTGGTCCCACCTTT
TCTCCCTTGCCAGAGAGTCCTGGATACACTAGTGATTCGTCCCAGGAATCAGGAGCCGTCTTTGATCCTGCTATG
GAGCTGGCTCAGCGTGTGCGAGAATTAGCTGGTGTTATGTTTGCCGTACCTACGAGCGGACCTCCTCAATCAAGT
GAACCTTTACCTGCGCCTACACCACCACCACCAGCACCTCCCTCGTCTGATATCTCTACCATGGCAACAGCTCAC
CCCATTATACCAACATCAATCGTCAATTTGACAACTACAACACGGCCCAAGACGAGTCATACTACCATTGAAAGA
CGGTACCGCACGAATTTGAATGCACGGATTCAGTCTTTACGTATGGCCGTACCTGCTCTACGTGTCCTAGAGGAC
AAAGATTCGGGAAAGAAGATCAAGAAGAATCTGAAAGGAGATGTTATCATTAAATCTTCTTCCTCCCCCACTCCT
ATTACTACCGGAAGTTCTCCATCTCCGTCAAATCCTTACGGCGAAGTTGATGTTATAGACGAACGAGGTTACGTC
GACGGAGTCAAAGTCGCGCGAAAATGCTCCAAAGCGAACGTTCTAGGAAAAGCCGTTGAATATATTAGAGTTTTG
AAACGTAGAGAAATGAGGTTGAAGAATGAGCAGGAAGGGCTCAAGAGTTTGATTTGTGGTTTGGTGGGTGGTCAG
GCGTTGTTGAGAGAGTGGGAGAAGGAATGGAGGTTGAGGTTTGGTGGAGAGGAGAAGGATGAGGTTGGAGGTGAT
TTCAATATTCCCGGTGGAGGAGAGCTGGATGACGATGAGGAGGAGGAGGATATGGATGATGATGAAGATGGAGAA
GAAGGCGTCGGAAAGAAGAGGAAGAGAGCTAAACTCGAGGTCAGGAAGAGTCAACAACCAAAGACGACACCGGTG
ATCCAGAATGTTGTCTTGGGCGTGGATGGTCAACCGGAAAAGAGGAAGAGAGGCAGACCTAGGAAAGTACCTCTG
CCCCCATCTCCAGTTACTCCCGAACAACAACAGCAACCTCAACCTCAGCAATACCTACTAGCGGTTTTTGCTCTA
TTCTCGTTCTTCAATTCACCTCTCACTACCAATAACGCTCATCATCAAACCCATCCTCATCAAGGACATGTGTTA
AGCTCAGTACCGCTTGATTATACCCCAGAAATTGTTGCTCAATTCACTCCTCTGTCGACTTGGAGAGATTGGGTA
CAACTTTTGCACCTCGGTATAACGGTTTTGCTGTTTTTGAGTGTTGTTGTCAGGATGGTCGGTGGGCGGATAGGA
AGGTCGAAGAAAAATGAGGAAACTCAGAAGAATATCGAGGAAATTATACTTGGAAAACAATCTATACCTTCTCTC
ACTTCATCAATCAAGTTATACCGCTCAACGATGAATTCTCCGATTATGAAGGCTTTGTTTTTGTACACTCTCGCT
TCTAATTCCTCTGGATTCATTAAACGTATGATCAAGTCATGGGCGAGGAGTATCTGGAATACAGCAAGCACCACT
GCAATGGCGAAGAAGGAATTGGTTGTGTTGAGTCTGGGCATCGATCAAATTTATGATGGATTTATGTCTGGTGTC
AAACTCGAAATCGCGAAAATGCGAAAATATGATTCAGATGACGAGGAAGAAGGGGACTTGGTGATTGACGTTTTG
GCTCGACGGGTTATTGAAATGAAGTCGAGCAAGGTATTGGGAAAGACGTTTGTTAAGGAAGTTATTGGGTGTGAT
GAAAAGAAGGAGGAGGGGGAGAAGAGGGAGGGGGAGTCTGGAAAGGAATTAAAGTTGTTGAGTGAGGCATCGAGA
GAATTGGGTGGGCCAGTGGAAGTTTTGGTGCGGAATGTTGAGAAAGCGGTTGTTGGTGGGGTGAATGGGTTGATA
AATGATGAGGAGGAGGAGGAGGAGGTTGTGATGGGGTGGAAGAAGATTGAGGATAATGTGGATGATGCGGAAGAT
TCGGATTCGATGCTTTCCTCAAGTACGATTTCGAGTGCGACTGCGACTTCGAGTACTGCGTTTTCGGAAGATGAA
GATGAAGATGACAGTTATCATCATTCTTCTACTACTCCGTTTACGATCCTTCAGGCATTGATCTTATACCGATCT
ATCTTCTCTTCTTCTTCCAAGTCAACCAAATTGAACCCTCCGCAAATTTCTGTCGAGCCACCCACACCTACAACT
CCGAAAGCTGTTTTACGTCGGTTAAATACTTTGAGTAGTGTTCAACAGCAACAGCAACAAGTACAACGACAAGTA
CAAGAAGTGGAGGAGGAGGAGAGGAGGAGGAGACGGATGTATGCGCTTAGACGATTATTAGGGAGTCGTGTTTTT
GAGAAATGCGTTCAAGGTGATGATGATGATTCTCAAGAAACGGACAAAGAAAGAGGAGAAGGAGTTGAGGGAGAG
AGAGAGGACATGACGACGATGATGGAAGATGCGAGAGATCGAGTCGTGGATATGTTGGTTGATGCTGAGAGGGGT
AGGAGGATGAACTATTAG
Gene >AgabiH97|015950
ATGGAAGAAATTGTGACGCCGCTGGAGGCCTCTGACCCGCTCAGGCTGCTCATCCACAACACAACCATGGAAGAA
CCTGCTGACTGGTCTTCTCTCTCTGCTCTTTGGCCCGACGACTGCATCGAGCCCAGCGCACTTTGTCTGCCCGCT
TTCGATACCGACTCTTTCGACCTCTCTGCAGACATGCTCGCGGCTCAGTTTCTCAATGACAGCGCCATGCTCATC
GAACCCGTTGATACCAAGCCGAGGAGGCTCAGTGTGACCTCCAGCTCTTCGGATTCTACTGGTGGTCCCACCTTT
TCTCCCTTGCCAGAGAGTCCTGGATACACTAGTGATTCGTCCCAGGAATCAGGAGCCGTCTTTGATCCTGCTATG
GAGCTGGCTCAGCGTGTGCGAGAATTAGCTGGTGTTATGTTTGCCGTACCTACGAGCGGACCTCCTCAATGTTTG
TAGTCTTCAGCCGTGCATCTTTCACAAGCTGAACTTTTTTTCCATAGCAAGTGAACCTTTACCTGCGCCTACACC
ACCACCACCAGCACCTCCCTCGTCTGATATCTCTACCATGGCAACAGCTCACCCCATTATACCAACATCAATCGT
CAATTTGACAACTACAACACGGCCCAAGACGAGTCATACTACCATTGAAAGACGGTACCGCACGAATTTGAATGC
ACGGATTCAGTCTTTACGTATGGCCGTACCTGCTCTACGTGTCCTAGAGGACAAAGATTCGGGAAAGAAGATCAA
GAAGAATCTGAAAGGAGATGTTATCATTAAATCTTCTTCCTCCCCCACTCCTATTACTACCGGAAGTTCTCCATC
TCCGTCAAATCCTTACGGCGAAGTTGATGTTATAGACGAACGAGGTTACGTCGACGGAGTCAAAGTCGCGCGAAA
ATGCTCCAAAGCGAACGTTCTAGGAAAAGCCGTTGAATATATTAGAGTTTTGAAACGTAGAGAAATGAGGTTGAA
GAATGAGCAGGAAGGGCTCAAGAGTTTGATTTGTGGTTTGGTGGGTGGTCAGGCGTTGTTGAGAGAGTGGGAGAA
GGAATGGAGGTTGAGGTTTGGTGGAGAGGAGAAGGATGAGGTTGGAGGTGATTTCAATATTCCCGGTGGAGGAGA
GCTGGATGACGATGAGGAGGAGGAGGATATGGATGATGATGAAGATGGAGAAGAAGGCGTCGGAAAGAAGAGGAA
GAGAGCTAAACTCGAGGTCAGGAAGAGTCAACAACCAAAGACGACACCGGTGATCCAGAATGTTGTCTTGGGCGT
GGATGGTCAACCGGAAAAGAGGAAGAGAGGCAGACCTAGGAAAGTACCTCTGCCCCCATCTCCAGTTACTCCCGA
ACAACAACAGCAACCTCAACCTCAGCAATACCTACTAGCGGTTTTTGCTCTATTCTCGTTCTTCAATTCACCTCT
CACTACCAATAACGCTCATCATCAAACCCATCCTCATCAAGGACATGTGTTAAGCTCAGTACCGCTTGATTATAC
CCCAGAAATTGTTGCTCAATTCACTCCTCTGTCGACTTGGAGAGATTGGGTACAACTTTTGCACCTCGGTATAAC
GGTTTTGCTGTTTTTGAGTGTTGTTGTCAGGATGGTCGGTGGGCGGATAGGAAGGTCGAAGAAAAATGAGGAAAC
TCAGAAGAATATCGAGGAAATTATACTTGGAAAACGTATGTATTCTCTCGATCGTATCAACCCCCTGAACTAATT
TTTTTATCTGCAATAGAATCTATACCTTCTCTCACTTCATCAATCAAGTTATACCGCTCAACGATGAATTCTCCG
ATTATGAAGGCTTTGTTTTTGTACACTCTCGCTTCTAATTCCTCTGGATTCATTAAACGTATGATCAAGTCATGG
GCGAGGAGTATCTGGAATACAGCAAGCACCACTGCAATGGCGAAGAAGGAATTGGTTGTGTTGAGTCTGGGCATC
GATCAAATTTATGATGGATTTATGTCTGGTGTCAAACTCGAAATCGCGAAAATGCGAAAATATGATTCAGATGAC
GAGGAAGAAGGGGACTTGGTGATTGACGTTTTGGCTCGACGGGTTATTGAAATGAAGTCGAGCAAGGTATTGGGA
AAGACGTTTGTTAAGGAAGTTATTGGGTGTGATGAAAAGAAGGAGGAGGGGGAGAAGAGGGAGGGGGAGTCTGGA
AAGGAATTAAAGTTGTTGAGTGAGGCATCGAGAGAATTGGGTGGGCCAGTGGAAGTTTTGGTGCGGAATGTTGAG
AAAGCGGTTGTTGGTGGGGTGAATGGGTTGATAAATGATGAGGAGGAGGAGGAGGAGGTTGTGATGGGGTGGAAG
AAGATTGAGGATAATGTGGATGATGCGGAAGATTCGGATTCGATGCTTTCCTCAAGTACGATTTCGAGTGCGACT
GCGACTTCGAGTACTGCGTTTTCGGAAGATGAAGATGAAGATGACAGTTATCATCATTCTTCTACTACTCCGTTT
ACGATCCTTCAGGCATTGATCTTATACCGATCTATCTTCTCTTCTTCTTCCAAGTCAACCAAATTGAACCCTCCG
CAAATTTCTGTCGAGCCACCCACACCTACAACTCCGAAAGCTGTTTTACGTCGGTTAAATACTTTGAGTAGTGTT
CAACAGCAACAGCAACAAGTACAACGACAAGTACAAGAAGTGGAGGAGGAGGAGAGGAGGAGGAGACGGATGTAT
GCGCTTAGACGATTATTAGGGAGTCGTGTTTTTGAGAAATGCGTTCAAGGTGATGATGATGATTCTCAAGAAACG
GACAAAGAAAGAGGAGAAGGAGTTGAGGGAGAGAGAGAGGACATGACGACGATGATGGAAGATGCGAGAGATCGA
GTCGTGGATATGTTGGTTGATGCTGAGAGGGGTAGGAGGATGAACTATTAG

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