Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|015190
Gene name
Locationscaffold_10:82702..84671
Strand+
Gene length (bp)1969
Transcript length (bp)1683
Coding sequence length (bp)1683
Protein length (aa) 561

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01569 PAP2 PAP2 superfamily 2.6E-18 111 239

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P23501|DS1P2_YEAST Dihydrosphingosine 1-phosphate phosphatase YSR3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YSR3 PE=3 SV=2 29 402 9.0E-49
sp|Q9P6N5|DS1PP_SCHPO Dihydrosphingosine 1-phosphate phosphatase C823.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC823.11 PE=3 SV=1 23 413 2.0E-48
sp|P47013|DS1P1_YEAST Dihydrosphingosine 1-phosphate phosphatase LCB3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LCB3 PE=1 SV=1 31 351 2.0E-43
sp|Q9M2G7|LPPD_ARATH Lipid phosphate phosphatase delta OS=Arabidopsis thaliana GN=LPPD PE=2 SV=1 45 321 1.0E-16
sp|Q55A00|SSPA_DICDI Probable sphingosine-1-phosphate phosphatase OS=Dictyostelium discoideum GN=sppA PE=3 SV=1 47 229 1.0E-12
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P23501|DS1P2_YEAST Dihydrosphingosine 1-phosphate phosphatase YSR3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YSR3 PE=3 SV=2 29 402 9.0E-49
sp|Q9P6N5|DS1PP_SCHPO Dihydrosphingosine 1-phosphate phosphatase C823.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC823.11 PE=3 SV=1 23 413 2.0E-48
sp|P47013|DS1P1_YEAST Dihydrosphingosine 1-phosphate phosphatase LCB3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LCB3 PE=1 SV=1 31 351 2.0E-43
sp|Q9M2G7|LPPD_ARATH Lipid phosphate phosphatase delta OS=Arabidopsis thaliana GN=LPPD PE=2 SV=1 45 321 1.0E-16
sp|Q55A00|SSPA_DICDI Probable sphingosine-1-phosphate phosphatase OS=Dictyostelium discoideum GN=sppA PE=3 SV=1 47 229 1.0E-12
sp|Q8IWX5|SGPP2_HUMAN Sphingosine-1-phosphate phosphatase 2 OS=Homo sapiens GN=SGPP2 PE=2 SV=1 58 228 3.0E-11
sp|Q810K3|SGPP2_MOUSE Sphingosine-1-phosphate phosphatase 2 OS=Mus musculus GN=Sgpp2 PE=2 SV=1 60 232 1.0E-10
sp|Q9JI99|SGPP1_MOUSE Sphingosine-1-phosphate phosphatase 1 OS=Mus musculus GN=Sgpp1 PE=1 SV=1 59 225 2.0E-06
sp|Q99P55|SGPP1_RAT Sphingosine-1-phosphate phosphatase 1 OS=Rattus norvegicus GN=Sgpp1 PE=1 SV=2 81 225 9.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 49 0.45

Transmembrane Domains

Domain # Start End Length
1 81 103 22
2 161 178 17
3 193 215 22
4 222 244 22
5 366 388 22
6 531 553 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|015190
MNVDDTDYDSPSLSSSRSASPTPSFDDYAVPGNKAMDLYDTMLPKWRAAPRRWLLPLIRKESQILAQMQEKIRTP
WLDAYFVYTSSLGTHTFFMTTLPACFWFGYTDLARGLLSALSIGVYCSSVVKDLFCSPRPFSPPVTRLTMGSHHL
EYGFPSTHSTNSISIALLLFAYIYDLTYPPLSSTPTTLSPTTFHILSLILAIYAFSIVFGRLYTAMHSFTDCFCG
VFLGTAIWWVSSSWNGIPIHISSLSSSPTTTIHLGRGLGMETHLWNWVSNGHWEVPLILIPLCLFLVHQHPQPVD
DCPCFEDAIAFASVFFGALVGDWVKRHSGLKEVMERVAIMPGSGWVLDVGRGWIQVERGWLDYLTWWSAATLKMT
IGIMVIFTWRLLAKSALHLILPPLFRLCARAFRLPNRRFYTPATEYKSVPSEFAMTKQGVGVLHPIPSLIDLPGS
VGFDVDVDIGMEEKDGKDGKGKGRRVRIVNGGVFNGNEKIGKVVNVGGQGGGLHVTFDHDEEEDNKGQGVKHYDA
DVLTKVIVYAGIAFISIEVLPASFGLLGLGVKSWM*
Coding >AgabiH97|015190
ATGAACGTCGACGACACAGACTACGACTCTCCTTCCCTCTCCTCTTCCCGTTCCGCTTCTCCCACTCCCAGCTTT
GACGACTATGCCGTTCCAGGAAACAAAGCTATGGACCTCTACGATACCATGCTTCCCAAATGGAGAGCCGCTCCT
CGAAGATGGCTTCTCCCTCTTATCCGCAAAGAGTCTCAAATCCTAGCTCAAATGCAGGAGAAAATCCGAACACCC
TGGTTGGATGCGTATTTCGTGTATACATCCTCATTGGGCACACATACCTTTTTCATGACCACCTTGCCGGCCTGT
TTTTGGTTTGGATATACTGATCTCGCGAGAGGTTTGTTGTCGGCGCTTTCTATTGGCGTTTATTGTTCTTCTGTC
GTGAAAGATTTATTTTGTTCACCTCGACCGTTCTCTCCTCCCGTCACTCGACTCACAATGGGATCTCATCATCTC
GAATACGGTTTTCCCTCCACCCATTCCACCAACAGCATCTCCATAGCTCTCCTCCTCTTCGCCTACATCTACGAT
CTCACATACCCACCCCTCTCTTCCACCCCCACCACACTCTCCCCAACCACTTTTCATATCCTATCCCTCATTTTG
GCCATATACGCCTTTTCTATCGTTTTTGGAAGACTATATACCGCGATGCATTCATTTACAGATTGTTTTTGTGGT
GTTTTTTTAGGGACTGCTATTTGGTGGGTATCAAGTTCATGGAATGGGATTCCTATTCATATATCTTCTCTCTCC
TCTTCTCCTACCACCACCATTCACCTCGGTCGTGGACTCGGTATGGAAACCCATTTATGGAATTGGGTATCCAAC
GGTCATTGGGAAGTCCCCCTTATATTAATTCCTTTATGTCTTTTTCTCGTTCATCAACATCCTCAACCTGTGGAT
GATTGTCCGTGTTTTGAAGATGCTATTGCGTTTGCTAGTGTGTTTTTTGGTGCTCTTGTGGGGGATTGGGTTAAG
AGACATTCGGGGTTGAAGGAGGTTATGGAGAGGGTTGCTATTATGCCGGGGAGTGGATGGGTTTTGGATGTTGGA
AGGGGGTGGATACAAGTTGAAAGAGGGTGGTTGGATTATTTGACTTGGTGGAGTGCTGCTACTCTAAAAATGACA
ATCGGTATCATGGTCATCTTTACATGGCGACTCTTAGCCAAATCAGCCTTACATCTCATTCTTCCACCTCTCTTC
CGATTATGTGCAAGAGCGTTTAGGTTACCGAATAGAAGGTTTTATACACCTGCGACGGAGTATAAATCTGTACCT
TCTGAGTTTGCGATGACGAAACAGGGTGTGGGGGTGTTGCATCCGATTCCGAGTTTGATTGATTTGCCGGGGAGT
GTTGGGTTTGATGTTGATGTTGATATTGGGATGGAGGAGAAGGATGGGAAGGATGGGAAAGGGAAGGGGAGGAGG
GTGAGGATTGTGAATGGAGGTGTGTTTAATGGGAATGAAAAGATTGGGAAAGTCGTGAATGTGGGTGGTCAAGGT
GGAGGTTTACATGTTACGTTTGATCATGATGAAGAAGAAGATAATAAAGGTCAAGGAGTGAAACATTATGACGCT
GATGTGTTGACAAAGGTGATTGTGTATGCGGGAATTGCGTTTATATCTATAGAGGTCTTGCCGGCTTCGTTTGGG
TTGTTGGGGTTGGGTGTGAAATCGTGGATGTGA
Transcript >AgabiH97|015190
ATGAACGTCGACGACACAGACTACGACTCTCCTTCCCTCTCCTCTTCCCGTTCCGCTTCTCCCACTCCCAGCTTT
GACGACTATGCCGTTCCAGGAAACAAAGCTATGGACCTCTACGATACCATGCTTCCCAAATGGAGAGCCGCTCCT
CGAAGATGGCTTCTCCCTCTTATCCGCAAAGAGTCTCAAATCCTAGCTCAAATGCAGGAGAAAATCCGAACACCC
TGGTTGGATGCGTATTTCGTGTATACATCCTCATTGGGCACACATACCTTTTTCATGACCACCTTGCCGGCCTGT
TTTTGGTTTGGATATACTGATCTCGCGAGAGGTTTGTTGTCGGCGCTTTCTATTGGCGTTTATTGTTCTTCTGTC
GTGAAAGATTTATTTTGTTCACCTCGACCGTTCTCTCCTCCCGTCACTCGACTCACAATGGGATCTCATCATCTC
GAATACGGTTTTCCCTCCACCCATTCCACCAACAGCATCTCCATAGCTCTCCTCCTCTTCGCCTACATCTACGAT
CTCACATACCCACCCCTCTCTTCCACCCCCACCACACTCTCCCCAACCACTTTTCATATCCTATCCCTCATTTTG
GCCATATACGCCTTTTCTATCGTTTTTGGAAGACTATATACCGCGATGCATTCATTTACAGATTGTTTTTGTGGT
GTTTTTTTAGGGACTGCTATTTGGTGGGTATCAAGTTCATGGAATGGGATTCCTATTCATATATCTTCTCTCTCC
TCTTCTCCTACCACCACCATTCACCTCGGTCGTGGACTCGGTATGGAAACCCATTTATGGAATTGGGTATCCAAC
GGTCATTGGGAAGTCCCCCTTATATTAATTCCTTTATGTCTTTTTCTCGTTCATCAACATCCTCAACCTGTGGAT
GATTGTCCGTGTTTTGAAGATGCTATTGCGTTTGCTAGTGTGTTTTTTGGTGCTCTTGTGGGGGATTGGGTTAAG
AGACATTCGGGGTTGAAGGAGGTTATGGAGAGGGTTGCTATTATGCCGGGGAGTGGATGGGTTTTGGATGTTGGA
AGGGGGTGGATACAAGTTGAAAGAGGGTGGTTGGATTATTTGACTTGGTGGAGTGCTGCTACTCTAAAAATGACA
ATCGGTATCATGGTCATCTTTACATGGCGACTCTTAGCCAAATCAGCCTTACATCTCATTCTTCCACCTCTCTTC
CGATTATGTGCAAGAGCGTTTAGGTTACCGAATAGAAGGTTTTATACACCTGCGACGGAGTATAAATCTGTACCT
TCTGAGTTTGCGATGACGAAACAGGGTGTGGGGGTGTTGCATCCGATTCCGAGTTTGATTGATTTGCCGGGGAGT
GTTGGGTTTGATGTTGATGTTGATATTGGGATGGAGGAGAAGGATGGGAAGGATGGGAAAGGGAAGGGGAGGAGG
GTGAGGATTGTGAATGGAGGTGTGTTTAATGGGAATGAAAAGATTGGGAAAGTCGTGAATGTGGGTGGTCAAGGT
GGAGGTTTACATGTTACGTTTGATCATGATGAAGAAGAAGATAATAAAGGTCAAGGAGTGAAACATTATGACGCT
GATGTGTTGACAAAGGTGATTGTGTATGCGGGAATTGCGTTTATATCTATAGAGGTCTTGCCGGCTTCGTTTGGG
TTGTTGGGGTTGGGTGTGAAATCGTGGATGTGA
Gene >AgabiH97|015190
ATGAACGTCGACGACACAGACTACGACTCTCCTTCCCTCTCCTCTTCCCGTTCCGCTTCTCCCACTCCCAGCTTT
GACGACTATGCCGTTCCAGGAAACAAAGCTATGGACCTCTACGATACCATGCTTCCCAAATGGAGAGCCGCTCCT
CGAAGATGGCTTCTCCCTCTTATCCGCAAAGAGTCTCAAATCCTAGCTCAAATGCAGGTACGTGCCTTTCTTTGT
CATCCACGAACAGCCAACCCATGACCTTTTAGGAGAAAATCCGAACACCCTGGTTGGATGCGTATTTCGTGTATA
CATCCTCATTGGGCACACATACCTTTTTCATGACCACCTTGCCGGCCTGTTTTTGGTTTGGATATACTGATCTCG
CGAGAGGGTGTGTATCCGTTTATGTGTAACCATGGATTTCTTTAAAGGTGTTTTGTAGTTTGTTGTCGGCGCTTT
CTATTGGCGTTTATTGTTCTTCTGTCGTGAAAGATTTATTTTGTTCACCTCGACCGTTCTCTCCTCCCGTCACTC
GACTCAGTAAGGTCTCTTCATATTTCCACTTTGTCCTTCTAAAAAAACCACAGCAATGGGATCTCATCATCTCGA
ATACGGTTTTCCCTCCACCCATTCCACCAACAGCATCTCCATAGCTCTCCTCCTCTTCGCCTACATCTACGATCT
CACATACCCACCCCTCTCTTCCACCCCCACCACACTCTCCCCAACCACTTTTCATATCCTATCCCTCATTTTGGC
CATATACGCCTTTTCTATCGTTTTTGGAAGACTATATACCGCGATGCATTCATTTACAGATTGTTTTTGTGGTGT
TTTTTTAGGGACTGCTATTTGGTGGGTATCAAGTTCATGGAATGGGATTCCTATTCATATATCTTCTCTCTCCTC
TTCTCCTACCACCACCATTCACCTCGGTCGTGGACTCGGTATGGAAACCCATTTATGGAATTGGGTATCCAACGG
TCATTGGGAAGTCCCCCTTATATTAATTCCTTTATGTCTTTTTCTCGTTCATCAACATCCTCAACCTGTGGATGA
TTGTCCGTGTTTTGAAGATGCTATTGCGTTTGCTAGTGTGTTTTTTGGTGCTCTTGTGGGGGATTGGGTTAAGAG
ACATTCGGGGTTGAAGGAGGTTATGGAGAGGGTTGCTATTATGCCGGGGAGTGGATGGGTTTTGGATGTTGGAAG
GGGGTGGATACAAGTTGAAAGAGGGTGGTTGGATTATTTGACTTGGTGGAGTGCTGCTACTCTAAAAATGACAAT
CGGTTCGTCATCCGTCATCATCCTTCTCTCTTTCCTCACACACACACAAATATCTCATCCTTCCATAGGTATCAT
GGTCATCTTTACATGGCGACTCTTAGCCAAATCAGCCTTACATCTCATTCTTCCACCTCTCTTCCGATTATGTGC
AAGAGCGTTTAGGTTACCGAATAGAAGGTTTTATACACCTGCGACGGAGTATAAATCTGTACCTTCTGAGTTTGC
GATGACGAAACAGGGTGTGGGGGTGTTGCATCCGATTCCGAGTTTGATTGATTTGCCGGGGAGTGTTGGGTTTGA
TGTTGATGTTGATATTGGGATGGAGGAGAAGGATGGGAAGGATGGGAAAGGGAAGGGGAGGAGGGTGAGGATTGT
GAATGGAGGTGTGTTTAATGGGAATGAAAAGATTGGGAAAGTCGTGAATGTGGGTGGTCAAGGTGGAGGTTTACA
TGTTACGTTTGATCATGATGAAGAAGAAGATAATAAAGGTCAAGGAGTGAAACATTATGACGCTGATGGTAACTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAATCACATTATTGACTTATTATTTATCGTTTAGTGTTGACAAA
GGTGATTGTGTATGCGGGAATTGCGTTTATATCTATAGAGGTCTTGCCGGCTTCGTTTGGGTTGTTGGGGTTGGG
TGTGAAATCGTGGATGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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