© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|015010 |
| Gene name | |
| Location | scaffold_10:33498..36501 |
| Strand | - |
| Gene length (bp) | 3003 |
| Transcript length (bp) | 2004 |
| Coding sequence length (bp) | 2004 |
| Protein length (aa) | 668 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 7.5E-41 | 203 | 590 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 5.7E-11 | 228 | 376 |
| PF06609 | TRI12 | Fungal trichothecene efflux pump (TRI12) | 1.6E-07 | 211 | 380 |
| PF06779 | MFS_4 | Uncharacterised MFS-type transporter YbfB | 6.4E-07 | 221 | 374 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9Y7S4|YQO5_SCHPO | Uncharacterized transporter C569.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC569.05c PE=3 SV=1 | 183 | 637 | 3.0E-98 |
| sp|O59699|YN42_SCHPO | Uncharacterized transporter C36.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC36.02c PE=3 SV=1 | 183 | 637 | 9.0E-97 |
| sp|O59698|YN41_SCHPO | Uncharacterized transporter C36.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC36.01c PE=1 SV=1 | 180 | 634 | 3.0E-93 |
| sp|O74829|YN2F_SCHPO | Uncharacterized MFS-type transporter C530.15c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC530.15c PE=1 SV=2 | 175 | 634 | 3.0E-88 |
| sp|Q10084|MFS2_SCHPO | Uncharacterized transporter mfs2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mfs2 PE=3 SV=1 | 143 | 634 | 2.0E-87 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9Y7S4|YQO5_SCHPO | Uncharacterized transporter C569.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC569.05c PE=3 SV=1 | 183 | 637 | 3.0E-98 |
| sp|O59699|YN42_SCHPO | Uncharacterized transporter C36.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC36.02c PE=3 SV=1 | 183 | 637 | 9.0E-97 |
| sp|O59698|YN41_SCHPO | Uncharacterized transporter C36.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC36.01c PE=1 SV=1 | 180 | 634 | 3.0E-93 |
| sp|O74829|YN2F_SCHPO | Uncharacterized MFS-type transporter C530.15c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC530.15c PE=1 SV=2 | 175 | 634 | 3.0E-88 |
| sp|Q10084|MFS2_SCHPO | Uncharacterized transporter mfs2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mfs2 PE=3 SV=1 | 143 | 634 | 2.0E-87 |
| sp|O59700|YN43_SCHPO | Uncharacterized transporter C36.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC36.03c PE=3 SV=1 | 181 | 634 | 8.0E-86 |
| sp|Q07824|TPO1_YEAST | Polyamine transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO1 PE=1 SV=1 | 106 | 637 | 2.0E-83 |
| sp|Q7Z9I0|YHA8_SCHPO | Uncharacterized MFS-type transporter C409.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC409.08 PE=3 SV=1 | 172 | 634 | 1.0E-81 |
| sp|Q10487|MFS1_SCHPO | Transporter mfs1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mfs1 PE=3 SV=1 | 124 | 637 | 3.0E-80 |
| sp|Q06451|TPO3_YEAST | Polyamine transporter 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO3 PE=1 SV=1 | 183 | 633 | 2.0E-79 |
| sp|P53283|TPO2_YEAST | Polyamine transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO2 PE=1 SV=1 | 183 | 633 | 7.0E-79 |
| sp|O59814|YCT4_SCHPO | Uncharacterized transporter C794.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.04c PE=3 SV=1 | 128 | 634 | 7.0E-76 |
| sp|O94528|CAF5_SCHPO | Caffeine resistance protein 5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=caf5 PE=3 SV=1 | 175 | 637 | 8.0E-76 |
| sp|O43081|YHS6_SCHPO | Uncharacterized MFS-type transporter C947.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC947.06c PE=3 SV=1 | 145 | 640 | 8.0E-76 |
| sp|Q12256|TPO4_YEAST | Polyamine transporter 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO4 PE=1 SV=1 | 171 | 651 | 3.0E-74 |
| sp|O59738|YN22_SCHPO | Uncharacterized transporter C530.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC530.02 PE=3 SV=1 | 172 | 634 | 2.0E-73 |
| sp|P38124|FLR1_YEAST | Fluconazole resistance protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLR1 PE=1 SV=1 | 176 | 636 | 4.0E-73 |
| sp|P38776|YHK8_YEAST | Probable drug/proton antiporter YHK8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHK8 PE=1 SV=1 | 181 | 637 | 1.0E-70 |
| sp|P32071|CYHR_CANMA | Cycloheximide resistance protein OS=Candida maltosa GN=CYHR PE=3 SV=1 | 143 | 637 | 4.0E-65 |
| sp|Q5ABU7|MDR1_CANAL | Multidrug resistance protein 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MDR1 PE=1 SV=1 | 175 | 637 | 9.0E-64 |
| sp|P28873|BMRP_CANAX | Benomyl/methotrexate resistance protein OS=Candida albicans GN=MDR1 PE=3 SV=1 | 175 | 637 | 1.0E-63 |
| sp|Q9USN4|YJA1_SCHPO | Uncharacterized transporter C1529.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1529.01 PE=3 SV=2 | 172 | 634 | 1.0E-60 |
| sp|Q9P3E8|YLZ2_SCHPO | Uncharacterized transporter C750.02c/PB2B2.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC750.02c PE=3 SV=1 | 148 | 638 | 8.0E-54 |
| sp|Q9P3V5|YI45_SCHPO | Uncharacterized transporter C1348.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1348.05 PE=3 SV=1 | 148 | 638 | 1.0E-53 |
| sp|Q9HDX4|MFC1_SCHPO | Uncharacterized transporter mfc1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mfc1 PE=3 SV=2 | 183 | 636 | 1.0E-50 |
| sp|P33532|BSU1_SCHPO | Vitamin B6 transporter bsu1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bsu1 PE=3 SV=2 | 125 | 634 | 3.0E-38 |
| sp|O59833|YCUD_SCHPO | Uncharacterized transporter C965.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC965.13 PE=3 SV=1 | 127 | 637 | 3.0E-37 |
| sp|O74899|YQEH_SCHPO | Uncharacterized transporter C576.17c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC576.17c PE=1 SV=1 | 182 | 637 | 8.0E-32 |
| sp|P38125|DTR1_YEAST | Dityrosine transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DTR1 PE=1 SV=1 | 219 | 617 | 2.0E-22 |
| sp|Q59XM0|QDR3_CANAL | MFS antiporter QDR3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=QDR3 PE=2 SV=1 | 185 | 399 | 3.0E-17 |
| sp|G2TRN8|YI74_SCHPO | Putative uncharacterized transporter C977.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC977.04 PE=5 SV=1 | 493 | 638 | 2.0E-14 |
| sp|P53943|AQR1_YEAST | Probable transporter AQR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AQR1 PE=1 SV=1 | 204 | 657 | 5.0E-12 |
| sp|P45123|BCR_HAEIN | Bicyclomycin resistance protein homolog OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=bcr PE=3 SV=1 | 223 | 486 | 1.0E-11 |
| sp|P38227|QDR3_YEAST | Quinidine resistance protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QDR3 PE=1 SV=2 | 185 | 393 | 2.0E-11 |
| sp|P46105|ACT22_STRCO | Probable actinorhodin transporter OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=actII-2 PE=3 SV=1 | 156 | 380 | 3.0E-11 |
| sp|P96709|YDGK_BACSU | Uncharacterized MFS-type transporter YdgK OS=Bacillus subtilis (strain 168) GN=ydgK PE=3 SV=1 | 221 | 359 | 4.0E-09 |
| sp|P40475|QDR1_YEAST | Quinidine resistance protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QDR1 PE=1 SV=1 | 190 | 479 | 6.0E-09 |
| sp|Q59YT1|QDR2_CANAL | MFS antiporter QDR2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=QDR2 PE=3 SV=1 | 219 | 616 | 2.0E-08 |
| sp|O94343|YHMA_SCHPO | Uncharacterized MFS-type transporter C1271.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1271.10c PE=1 SV=1 | 162 | 405 | 2.0E-08 |
| sp|P28246|BCR_ECOLI | Bicyclomycin resistance protein OS=Escherichia coli (strain K12) GN=bcr PE=1 SV=4 | 219 | 379 | 4.0E-08 |
| sp|Q1RI77|BCRH_RICBR | Uncharacterized transporter RBE_0856 OS=Rickettsia bellii (strain RML369-C) GN=RBE_0856 PE=3 SV=1 | 221 | 376 | 5.0E-08 |
| sp|P40474|QDR2_YEAST | Quinidine resistance protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QDR2 PE=1 SV=1 | 247 | 479 | 2.0E-07 |
| sp|Q43975|PCAK_ACIAD | 4-hydroxybenzoate transporter PcaK OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=pcaK PE=1 SV=3 | 156 | 391 | 3.0E-07 |
| sp|Q4UMJ9|BCRH_RICFE | Uncharacterized transporter RF_0358 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=RF_0358 PE=3 SV=1 | 221 | 457 | 5.0E-07 |
| sp|O32182|YUSP_BACSU | Uncharacterized MFS-type transporter YusP OS=Bacillus subtilis (strain 168) GN=yusP PE=3 SV=1 | 193 | 357 | 2.0E-06 |
| sp|P37597|YDHC_ECOLI | Inner membrane transport protein YdhC OS=Escherichia coli (strain K12) GN=ydhC PE=1 SV=3 | 219 | 378 | 4.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 47 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 197 | 219 | 22 |
| 2 | 234 | 256 | 22 |
| 3 | 263 | 281 | 18 |
| 4 | 296 | 318 | 22 |
| 5 | 325 | 347 | 22 |
| 6 | 362 | 384 | 22 |
| 7 | 431 | 453 | 22 |
| 8 | 468 | 490 | 22 |
| 9 | 510 | 529 | 19 |
| 10 | 539 | 561 | 22 |
| 11 | 574 | 596 | 22 |
| 12 | 601 | 623 | 22 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Casing | Casing mycelium | 8.83 | 4.55 | 13.10 |
| Initials | Initials knots | 10.28 | 5.41 | 15.14 |
| Pileal_Stipeal_center | Stage I stipe center | 16.22 | 9.06 | 23.38 |
| Pileal_Stipeal_shell | Stage I stipe shell | 17.01 | 9.54 | 24.48 |
| DIF_stipe_center | Stage II stipe center | 13.68 | 7.41 | 19.94 |
| DIF_stipe_shell | Stage II stipe shell | 16.04 | 8.90 | 23.18 |
| DIF_stipe_skin | Stage II stipe skin | 16.75 | 9.12 | 24.38 |
| DIF_cap_skin | Stage II cap skin | 105.84 | 50.53 | 161.15 |
| DIF_cap_tissue | Stage II cap tissue | 91.73 | 43.02 | 140.44 |
| DIF_gill_tissue | Stage II gill tissue | 17.55 | 9.86 | 25.24 |
| YFB_stipe_center | Young fruiting body stipe center | 9.09 | 4.67 | 13.52 |
| YFB_stipe_shell | Young fruiting body stipe shell | 10.46 | 5.48 | 15.44 |
| YFB_stipe_skin | Young fruiting body stipe skin | 16.97 | 9.52 | 24.41 |
| YFB_cap_skin | Young fruiting body cap skin | 47.61 | 28.53 | 66.70 |
| YFB_cap_tissue | Young fruiting body cap tissue | 39.89 | 23.86 | 55.91 |
| YFB_gill_tissue | Young fruiting body gill tissue | 21.12 | 11.92 | 30.33 |
| YFB_veil | Young fruiting body veil | 15.70 | 8.72 | 22.68 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Casing | DIF_gill_tissue | 0.025205 | yes |
| Casing | YFB_stipe_center | 0.964708 | no |
| Casing | YFB_stipe_shell | 0.734571 | no |
| Casing | YFB_stipe_skin | 0.033674 | yes |
| Casing | YFB_cap_skin | 0.000613 | yes |
| Casing | YFB_cap_tissue | 0.000613 | yes |
| Casing | YFB_gill_tissue | 0.002951 | yes |
| Casing | YFB_veil | 0.070317 | no |
| Casing | Initials | 0.768199 | no |
| Casing | Pileal_Stipeal_center | 0.051932 | no |
| Casing | Pileal_Stipeal_shell | 0.034142 | yes |
| Casing | DIF_stipe_center | 0.218638 | no |
| Casing | DIF_stipe_shell | 0.061473 | no |
| Casing | DIF_stipe_skin | 0.047373 | yes |
| Casing | DIF_cap_skin | 0.000613 | yes |
| Casing | DIF_cap_tissue | 0.000613 | yes |
| DIF_gill_tissue | YFB_stipe_center | 0.031088 | yes |
| DIF_gill_tissue | YFB_stipe_shell | 0.097943 | no |
| DIF_gill_tissue | YFB_stipe_skin | 0.953843 | no |
| DIF_gill_tissue | YFB_cap_skin | 0.000613 | yes |
| DIF_gill_tissue | YFB_cap_tissue | 0.000613 | yes |
| DIF_gill_tissue | YFB_gill_tissue | 0.669632 | no |
| DIF_gill_tissue | YFB_veil | 0.827726 | no |
| YFB_stipe_center | YFB_stipe_shell | 0.792120 | no |
| YFB_stipe_center | YFB_stipe_skin | 0.043983 | yes |
| YFB_stipe_center | YFB_cap_skin | 0.000613 | yes |
| YFB_stipe_center | YFB_cap_tissue | 0.000613 | yes |
| YFB_stipe_center | YFB_gill_tissue | 0.008121 | yes |
| YFB_stipe_center | YFB_veil | 0.085898 | no |
| YFB_stipe_shell | YFB_stipe_skin | 0.125875 | no |
| YFB_stipe_shell | YFB_cap_skin | 0.000613 | yes |
| YFB_stipe_shell | YFB_cap_tissue | 0.000613 | yes |
| YFB_stipe_shell | YFB_gill_tissue | 0.014956 | yes |
| YFB_stipe_shell | YFB_veil | 0.237992 | no |
| YFB_stipe_skin | YFB_cap_skin | 0.000613 | yes |
| YFB_stipe_skin | YFB_cap_tissue | 0.000613 | yes |
| YFB_stipe_skin | YFB_gill_tissue | 0.585974 | no |
| YFB_stipe_skin | YFB_veil | 0.887372 | no |
| YFB_cap_skin | YFB_cap_tissue | 0.636669 | no |
| YFB_cap_skin | YFB_gill_tissue | 0.002084 | yes |
| YFB_cap_skin | YFB_veil | 0.000613 | yes |
| YFB_cap_tissue | YFB_gill_tissue | 0.021056 | yes |
| YFB_cap_tissue | YFB_veil | 0.000613 | yes |
| YFB_gill_tissue | YFB_veil | 0.421783 | no |
| Initials | DIF_gill_tissue | 0.083501 | no |
| Initials | YFB_stipe_center | 0.826926 | no |
| Initials | YFB_stipe_shell | 0.979274 | no |
| Initials | YFB_stipe_skin | 0.107603 | no |
| Initials | YFB_cap_skin | 0.000613 | yes |
| Initials | YFB_cap_tissue | 0.000613 | yes |
| Initials | YFB_gill_tissue | 0.012577 | yes |
| Initials | YFB_veil | 0.213780 | no |
| Initials | Pileal_Stipeal_center | 0.160642 | no |
| Initials | Pileal_Stipeal_shell | 0.110231 | no |
| Initials | DIF_stipe_center | 0.472931 | no |
| Initials | DIF_stipe_shell | 0.187434 | no |
| Initials | DIF_stipe_skin | 0.135891 | no |
| Initials | DIF_cap_skin | 0.000613 | yes |
| Initials | DIF_cap_tissue | 0.000613 | yes |
| Pileal_Stipeal_center | DIF_gill_tissue | 0.881649 | no |
| Pileal_Stipeal_center | YFB_stipe_center | 0.073401 | no |
| Pileal_Stipeal_center | YFB_stipe_shell | 0.182806 | no |
| Pileal_Stipeal_center | YFB_stipe_skin | 0.936658 | no |
| Pileal_Stipeal_center | YFB_cap_skin | 0.000613 | yes |
| Pileal_Stipeal_center | YFB_cap_tissue | 0.000613 | yes |
| Pileal_Stipeal_center | YFB_gill_tissue | 0.485005 | no |
| Pileal_Stipeal_center | YFB_veil | 0.956349 | no |
| Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.933960 | no |
| Pileal_Stipeal_center | DIF_stipe_center | 0.703973 | no |
| Pileal_Stipeal_center | DIF_stipe_shell | 0.984531 | no |
| Pileal_Stipeal_center | DIF_stipe_skin | 0.958095 | no |
| Pileal_Stipeal_center | DIF_cap_skin | 0.000613 | yes |
| Pileal_Stipeal_center | DIF_cap_tissue | 0.000613 | yes |
| Pileal_Stipeal_shell | DIF_gill_tissue | 0.958438 | no |
| Pileal_Stipeal_shell | YFB_stipe_center | 0.043339 | yes |
| Pileal_Stipeal_shell | YFB_stipe_shell | 0.126023 | no |
| Pileal_Stipeal_shell | YFB_stipe_skin | 0.995604 | no |
| Pileal_Stipeal_shell | YFB_cap_skin | 0.000613 | yes |
| Pileal_Stipeal_shell | YFB_cap_tissue | 0.000613 | yes |
| Pileal_Stipeal_shell | YFB_gill_tissue | 0.597205 | no |
| Pileal_Stipeal_shell | YFB_veil | 0.882446 | no |
| Pileal_Stipeal_shell | DIF_stipe_center | 0.602664 | no |
| Pileal_Stipeal_shell | DIF_stipe_shell | 0.916523 | no |
| Pileal_Stipeal_shell | DIF_stipe_skin | 0.980071 | no |
| Pileal_Stipeal_shell | DIF_cap_skin | 0.000613 | yes |
| Pileal_Stipeal_shell | DIF_cap_tissue | 0.000613 | yes |
| DIF_stipe_center | DIF_gill_tissue | 0.531781 | no |
| DIF_stipe_center | YFB_stipe_center | 0.259385 | no |
| DIF_stipe_center | YFB_stipe_shell | 0.513401 | no |
| DIF_stipe_center | YFB_stipe_skin | 0.603949 | no |
| DIF_stipe_center | YFB_cap_skin | 0.000613 | yes |
| DIF_stipe_center | YFB_cap_tissue | 0.000613 | yes |
| DIF_stipe_center | YFB_gill_tissue | 0.189283 | no |
| DIF_stipe_center | YFB_veil | 0.780337 | no |
| DIF_stipe_center | DIF_stipe_shell | 0.737935 | no |
| DIF_stipe_center | DIF_stipe_skin | 0.651202 | no |
| DIF_stipe_center | DIF_cap_skin | 0.000613 | yes |
| DIF_stipe_center | DIF_cap_tissue | 0.000613 | yes |
| DIF_stipe_shell | DIF_gill_tissue | 0.865196 | no |
| DIF_stipe_shell | YFB_stipe_center | 0.077343 | no |
| DIF_stipe_shell | YFB_stipe_shell | 0.209483 | no |
| DIF_stipe_shell | YFB_stipe_skin | 0.920774 | no |
| DIF_stipe_shell | YFB_cap_skin | 0.000613 | yes |
| DIF_stipe_shell | YFB_cap_tissue | 0.000613 | yes |
| DIF_stipe_shell | YFB_gill_tissue | 0.472318 | no |
| DIF_stipe_shell | YFB_veil | 0.971350 | no |
| DIF_stipe_shell | DIF_stipe_skin | 0.943273 | no |
| DIF_stipe_shell | DIF_cap_skin | 0.000613 | yes |
| DIF_stipe_shell | DIF_cap_tissue | 0.000613 | yes |
| DIF_stipe_skin | DIF_gill_tissue | 0.938024 | no |
| DIF_stipe_skin | YFB_stipe_center | 0.059121 | no |
| DIF_stipe_skin | YFB_stipe_shell | 0.156514 | no |
| DIF_stipe_skin | YFB_stipe_skin | 0.982628 | no |
| DIF_stipe_skin | YFB_cap_skin | 0.000613 | yes |
| DIF_stipe_skin | YFB_cap_tissue | 0.002084 | yes |
| DIF_stipe_skin | YFB_gill_tissue | 0.578285 | no |
| DIF_stipe_skin | YFB_veil | 0.912382 | no |
| DIF_stipe_skin | DIF_cap_skin | 0.000613 | yes |
| DIF_stipe_skin | DIF_cap_tissue | 0.000613 | yes |
| DIF_cap_skin | DIF_gill_tissue | 0.000613 | yes |
| DIF_cap_skin | YFB_stipe_center | 0.000613 | yes |
| DIF_cap_skin | YFB_stipe_shell | 0.000613 | yes |
| DIF_cap_skin | YFB_stipe_skin | 0.000613 | yes |
| DIF_cap_skin | YFB_cap_skin | 0.016104 | yes |
| DIF_cap_skin | YFB_cap_tissue | 0.002525 | yes |
| DIF_cap_skin | YFB_gill_tissue | 0.000613 | yes |
| DIF_cap_skin | YFB_veil | 0.000613 | yes |
| DIF_cap_skin | DIF_cap_tissue | 0.805669 | no |
| DIF_cap_tissue | DIF_gill_tissue | 0.000613 | yes |
| DIF_cap_tissue | YFB_stipe_center | 0.000613 | yes |
| DIF_cap_tissue | YFB_stipe_shell | 0.000613 | yes |
| DIF_cap_tissue | YFB_stipe_skin | 0.000613 | yes |
| DIF_cap_tissue | YFB_cap_skin | 0.037364 | yes |
| DIF_cap_tissue | YFB_cap_tissue | 0.007439 | yes |
| DIF_cap_tissue | YFB_gill_tissue | 0.000613 | yes |
| DIF_cap_tissue | YFB_veil | 0.000613 | yes |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|015010 MKSMRSGLARAVCGERTAVRRQFTHRLKILGQESALIFILADSTAGLVVIDPPSHTMTTSPRRRPPGDIHSRHIP LTHPQSMIHQFADIQSALREPYHLLTPWRMTSLEREINRDEQQIQMYGGDCIHEPPPKAPLTPSVSFDEQETEES GGQKPEEGLPAHSFLSPSATLDGNLVGWDGPDDPKNPQNWSFKYKCFITFCCILMALDGTFASSAPSLASPSIRA EFHSSREVADLITTTFLLGYVFGPLIWGPGSELIGRRPIFRYTLVLYTLSFLGQSLAKNMETLLVTRFISGFLAA VPVTNCGGVIADIWSAAGRGPAMSLFTASVFLGPVLGPVISGLIIQADASWRWIFWVMMFFTAAITLLVVPFFPE TYAPVILLYKVKRLRKEDPVSNKNLYAEHENQDWSVKGVLNRTILRPFKMLAVEPILLLVTLYISVVYGLLYGLF QAFPIIFTQIHHFNIAETGLIFIGTGIGTTIGSLINYLLTLGYPKLIVKWRGFPPPEKRLLSGMIGAPALVIGAL WMGWAGNYESVPWYVAGLGTIVLGMGISLIFMSFLSYLVDTYLMYSASAFAANTFLRSAVAAAFPLFTVQMFNAL GVNWACTMLGLVGLVFLPTPFLFYKYGARLRAKSVFAPCIDLKIKKEIEEEERNNNKGSKTDADLKV* |
| Coding | >AgabiH97|015010 ATGAAGTCGATGAGGAGCGGGCTCGCTCGTGCCGTGTGCGGGGAGCGGACGGCAGTCAGACGCCAGTTTACGCAC AGACTCAAGATTCTCGGCCAAGAATCCGCCCTTATATTTATCCTCGCCGACTCAACAGCTGGCCTGGTTGTCATT GATCCTCCGTCACATACGATGACTACATCGCCTCGACGCCGACCTCCCGGAGACATTCACTCTCGTCATATCCCT CTCACCCACCCCCAGTCCATGATCCATCAGTTCGCCGACATTCAGTCAGCCTTGCGAGAGCCCTACCACCTTCTC ACTCCATGGCGGATGACTTCCCTCGAACGAGAAATCAACCGGGACGAGCAACAAATTCAGATGTATGGTGGTGAC TGTATCCATGAACCCCCGCCCAAAGCTCCGCTTACTCCCAGCGTGTCATTTGATGAGCAAGAGACAGAAGAGAGT GGGGGACAAAAACCGGAAGAAGGCTTGCCGGCGCATTCGTTCCTGTCGCCATCGGCAACTTTGGATGGGAACCTT GTTGGATGGGATGGTCCTGATGATCCCAAGAATCCTCAAAACTGGAGCTTCAAATATAAATGTTTTATTACCTTT TGTTGCATATTAATGGCCTTGGATGGTACATTTGCTTCATCCGCTCCATCTTTGGCATCACCTTCAATAAGAGCT GAATTTCACTCGTCTCGTGAAGTAGCAGACCTAATAACAACAACTTTCCTCTTGGGCTACGTCTTCGGGCCATTA ATTTGGGGCCCGGGAAGTGAACTTATCGGTCGACGACCCATTTTCCGATACACATTAGTTCTCTACACTCTCTCC TTCCTCGGGCAAAGTCTGGCCAAAAATATGGAAACCCTTCTCGTCACAAGATTTATCTCCGGGTTTTTGGCCGCT GTTCCAGTGACTAACTGCGGCGGAGTCATCGCAGATATCTGGTCCGCTGCCGGTCGGGGCCCAGCCATGAGTTTG TTCACGGCTAGCGTTTTCCTCGGCCCCGTGCTAGGTCCGGTAATTTCGGGACTGATTATTCAGGCAGATGCAAGT TGGAGATGGATATTTTGGGTTATGATGTTTTTCACCGCGGCAATAACATTGCTTGTTGTGCCTTTCTTCCCGGAG ACGTACGCTCCTGTAATTCTGTTATATAAGGTCAAGCGACTACGAAAAGAAGATCCGGTATCGAACAAAAATCTT TATGCCGAACATGAAAACCAAGATTGGTCAGTCAAGGGTGTACTCAACCGGACAATTCTTCGTCCTTTCAAGATG TTGGCCGTAGAGCCCATTCTTCTCCTTGTAACACTCTACATCTCAGTTGTCTATGGATTGTTGTACGGACTATTC CAGGCTTTCCCAATCATCTTCACCCAGATCCATCACTTCAACATTGCAGAGACCGGACTTATATTCATCGGCACT GGAATTGGTACCACAATCGGCTCATTGATCAATTATCTCCTTACCCTGGGTTATCCAAAGCTGATCGTCAAATGG CGAGGATTCCCGCCTCCAGAGAAGAGATTGTTGAGTGGAATGATTGGTGCTCCTGCGCTTGTTATTGGAGCTCTT TGGATGGGATGGGCTGGGAATTACGAAAGTGTGCCTTGGTACGTTGCGGGTTTAGGCACGATTGTTCTTGGAATG GGTATTAGTTTGATCTTTATGAGTTTTCTGAGTTATCTCGTGGATACGTATTTAATGTACAGCGCATCCGCGTTC GCTGCGAACACGTTCCTTCGTTCAGCTGTAGCTGCCGCATTTCCACTATTTACAGTACAAATGTTCAATGCTCTG GGCGTTAATTGGGCATGTACCATGCTCGGTCTAGTTGGATTGGTTTTCCTACCCACTCCTTTCTTGTTTTATAAA TATGGCGCAAGACTCAGAGCGAAAAGTGTTTTCGCGCCTTGTATAGATTTGAAGATCAAGAAGGAGATCGAGGAA GAAGAGAGAAATAATAATAAGGGATCTAAAACCGATGCGGACCTAAAAGTATAA |
| Transcript | >AgabiH97|015010 ATGAAGTCGATGAGGAGCGGGCTCGCTCGTGCCGTGTGCGGGGAGCGGACGGCAGTCAGACGCCAGTTTACGCAC AGACTCAAGATTCTCGGCCAAGAATCCGCCCTTATATTTATCCTCGCCGACTCAACAGCTGGCCTGGTTGTCATT GATCCTCCGTCACATACGATGACTACATCGCCTCGACGCCGACCTCCCGGAGACATTCACTCTCGTCATATCCCT CTCACCCACCCCCAGTCCATGATCCATCAGTTCGCCGACATTCAGTCAGCCTTGCGAGAGCCCTACCACCTTCTC ACTCCATGGCGGATGACTTCCCTCGAACGAGAAATCAACCGGGACGAGCAACAAATTCAGATGTATGGTGGTGAC TGTATCCATGAACCCCCGCCCAAAGCTCCGCTTACTCCCAGCGTGTCATTTGATGAGCAAGAGACAGAAGAGAGT GGGGGACAAAAACCGGAAGAAGGCTTGCCGGCGCATTCGTTCCTGTCGCCATCGGCAACTTTGGATGGGAACCTT GTTGGATGGGATGGTCCTGATGATCCCAAGAATCCTCAAAACTGGAGCTTCAAATATAAATGTTTTATTACCTTT TGTTGCATATTAATGGCCTTGGATGGTACATTTGCTTCATCCGCTCCATCTTTGGCATCACCTTCAATAAGAGCT GAATTTCACTCGTCTCGTGAAGTAGCAGACCTAATAACAACAACTTTCCTCTTGGGCTACGTCTTCGGGCCATTA ATTTGGGGCCCGGGAAGTGAACTTATCGGTCGACGACCCATTTTCCGATACACATTAGTTCTCTACACTCTCTCC TTCCTCGGGCAAAGTCTGGCCAAAAATATGGAAACCCTTCTCGTCACAAGATTTATCTCCGGGTTTTTGGCCGCT GTTCCAGTGACTAACTGCGGCGGAGTCATCGCAGATATCTGGTCCGCTGCCGGTCGGGGCCCAGCCATGAGTTTG TTCACGGCTAGCGTTTTCCTCGGCCCCGTGCTAGGTCCGGTAATTTCGGGACTGATTATTCAGGCAGATGCAAGT TGGAGATGGATATTTTGGGTTATGATGTTTTTCACCGCGGCAATAACATTGCTTGTTGTGCCTTTCTTCCCGGAG ACGTACGCTCCTGTAATTCTGTTATATAAGGTCAAGCGACTACGAAAAGAAGATCCGGTATCGAACAAAAATCTT TATGCCGAACATGAAAACCAAGATTGGTCAGTCAAGGGTGTACTCAACCGGACAATTCTTCGTCCTTTCAAGATG TTGGCCGTAGAGCCCATTCTTCTCCTTGTAACACTCTACATCTCAGTTGTCTATGGATTGTTGTACGGACTATTC CAGGCTTTCCCAATCATCTTCACCCAGATCCATCACTTCAACATTGCAGAGACCGGACTTATATTCATCGGCACT GGAATTGGTACCACAATCGGCTCATTGATCAATTATCTCCTTACCCTGGGTTATCCAAAGCTGATCGTCAAATGG CGAGGATTCCCGCCTCCAGAGAAGAGATTGTTGAGTGGAATGATTGGTGCTCCTGCGCTTGTTATTGGAGCTCTT TGGATGGGATGGGCTGGGAATTACGAAAGTGTGCCTTGGTACGTTGCGGGTTTAGGCACGATTGTTCTTGGAATG GGTATTAGTTTGATCTTTATGAGTTTTCTGAGTTATCTCGTGGATACGTATTTAATGTACAGCGCATCCGCGTTC GCTGCGAACACGTTCCTTCGTTCAGCTGTAGCTGCCGCATTTCCACTATTTACAGTACAAATGTTCAATGCTCTG GGCGTTAATTGGGCATGTACCATGCTCGGTCTAGTTGGATTGGTTTTCCTACCCACTCCTTTCTTGTTTTATAAA TATGGCGCAAGACTCAGAGCGAAAAGTGTTTTCGCGCCTTGTATAGATTTGAAGATCAAGAAGGAGATCGAGGAA GAAGAGAGAAATAATAATAAGGGATCTAAAACCGATGCGGACCTAAAAGTATAA |
| Gene | >AgabiH97|015010 ATGAAGTCGATGAGGAGCGGGCTCGCTCGTGCCGTGTGCGGGTATCCCGGTTTCGACATACCGGCAGAAAGCTTC GTACCGGCTTCGGCTAGATAAGGCTTAATCAGGTGAGTCGCAGTCCGATCCGGGCCGGCATTCAAGTTAGGCCGG GATGACGTGGAAAAGATAGACGACAAGGTTTTTCCGTCCCACCAGGGAGCGGACGGCAGTCAGACGCCAGTTTAC GCACAGACTCAAGATTCTCGGCCAAGAATCCGCCCTTAGTAAGAGTGGCTGAGGCCTGCTCCATTTTTTTTTTCA TATCTTCGTCATCTTTTCCACATGCTTCGCTTCATTTGTGCCGGACTCGACAGTATTTATCCTCGCCGACTCAAC AGCTGGCCTGGTTGTCATTGTGCGTGAATTCCCCCTCATCCGACCTCCTCTTTTCCTCGTCATACCGACCATGGA ACTATCTCTTACACATTCAAAAGGATCCTCCGTCACATACGATGACTACATCGCCTCGACGCCGACCTCCCGGAG ACATTCACTCTCGTCATATCCCTCTCACCCACCCCCAGTCCATGATCCATCAGTTCGCCGACATTCAGTCAGCCT TGCGAGAGCCCTACCACCTTCTCACTCCATGGTTCCCTCTTCGTCCTCTCGTCCTCTCTCAACTCAATGGTTTTT TGGTCCCGCAACTGGTTCTGCTTTATTACCCAGGCGGATGACTTCCCTCGAACGAGAAATCAACCGGGACGAGCA ACAAATTCAGATGTATGGTGGTGACTGTATCCATGAACCCCCGCCCAAAGCTCCGCTTACTCCCAGCGTGTCATT TGATGAGCAAGAGACAGAAGAGAGTGGGGGACAAAAACCGGAAGAAGGCTTGCCGGCGCATTCGTTCCTGTCGCC ATCGGCAACTTTGGATGGGAACCTTGTTGGATGGGATGGTCCTGATGATCCCAAGAATCCTCAAAACTGGAGCTT CAAATATAAATGTTTTATTACCTTTTGTTGCATATTAATGGCCTTGGATGGGTGCGTCTTTTTTCTCTTTCATTC TAGAACACCAGACTCATTCGTCTATTTATAGTACATTTGCTTCATCCGCTCCATCTTTGGCATCACCTTCAATAA GAGCTGAATTTCACTCGTCTCGTGAAGTAGCAGACCTAATAACAACAACTTTCCTCTTGGGCTACGTCTTCGGGG TATGTGATTCTTCTTCTCAAATGCCACTCCCCTTCTCATTGATCGCTTTAGCCATTAATTTGGGGCCCGGGAAGT GAACTTATCGGTCGACGACCCATTTTCCGATACACATTAGTTCTCTACACTCTCTCCTTCCTCGGGCAAAGTCTG GCCAAAAATATGGAAACCCTTCTCGTCACAAGATTTATCTCCGGGTTTTTGGCCGCTGTTCCAGTGACTAACTGC GGCGGAGTCATCGCAGATATCTGGTCCGCTGCCGGTCGGGGCCCAGCCATGAGTTTGTTCACGGCTAGCGTTTTC CTCGGCCCCGTGCTAGGTCCGGTAATTTCGGGACTGTGAGTATCATTGTACTATCTTGACTATAAATTTGGATCT GATCCCCGCTTGTTCGTTCTTGTTCCTTCGGCTGGATTATTGGTCTCCCTCGACCCGATTGACGCTCTTTCGCGA TTTCTATTTTCCGATTTCCTTACTGGCAGGATTATTCAGGCAGATGCAAGTTGGAGATGGATATTTTGGGTTATG ATGTTTTTCACCGCGGCAATAACATTGCTTGTTGTGCCTTTCTTCCCGGAGACGTACGCTCCTGTAATTCTGTTA TATAAGGTATTTCCTATCTATTCTTCTCATTTTCTGAGTAGAGTTTAACTTTTGATGGTTGCATAGGTCAAGCGA CTACGAAAAGAAGATCCGGTATCGAACAAAAATCTTTATGCCGAACATGAAAACCAAGATTGGTCAGTCAAGGGT GTACTCAACCGGACAATTCTTCGTCCTTTCAAGATGTTGGCCGTAGAGCCCATTCTTCTCCTTGTAACACTCTAC ATCTCAGTTGTCTATGGATTGTTGTACGGACGTGCGTCCTTTCTGCTTACCATGTCGAAAAACACTTAACTCACG TTATCAAAATTTTTCTAGTATTCCAGGCTTTCCCAATCATCTTCACCCAGATCCATCACTTCAACATTGCAGAGA CCGGACTTATATTCATCGGCACTGGAATTGGTACCACAATCGGCTCATTGATCAATTATCTCCTTACCCTGGGTT ATCCAAAGCTGATCGTCAAATGGCGAGGATTCCCGCCTCCAGAGAAGAGATTGTTGAGTGGAATGATTGGTGCTC CTGCGCTTGTTATTGGAGCTCTTTGGATGGGATGGGCTGGGAATTACGAAAGTGTGCCTTGGTACGTTGCGGGTT TAGGCACGATTGTTCTTGGAATGGGTATTAGTTTGATCTTTATGAGTTTTCTGGTGAGCTTTTTGTTGTAGCTTC AATTTTGCGCTCTGACTGACATGGGTCTATTTTTGTAGAGTTATCTCGTGGATACGTATTTGTGAGTTTATTGTT CCCCCTATCATTCGTGCCTTCAACTGTTAATTAATAATGTTTTTTATAGAATGTACAGCGCATCCGCGTTCGCTG CGAACACGTTCCTTCGTTCAGCTGTAGCTGCCGCATTTCCACTATTTACAGTACAAATGTTCAATGCTGTATGTT ATCTTCTATCTTCTTATCTGTTAAATAACTGATTTTTTTTCAGCTGGGCGTTAATTGGGCATGTACCATGCTCGG TCTAGTTGGATTGGTTTTCCTACCCACTCCTTTCTTGTTTTATAAATATGGCGCAAGACTCAGAGCGAAAAGTGT TTTCGCGCCTTGTATAGTACGTCTTTCATAAGCTTGAGTAGTAATATCTACTGACTGTTTTACTTTTAGGATTTG AAGATCAAGAAGGAGATCGAGGAAGAAGAGAGAAATAATAATAAGGGATCTAAAACCGATGCGGACCTAAAAGTA TAA |