Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|014820
Gene name
Locationscaffold_1:3532421..3534277
Strand-
Gene length (bp)1856
Transcript length (bp)1476
Coding sequence length (bp)1476
Protein length (aa) 492

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01565 FAD_binding_4 FAD binding domain 2.5E-16 73 205

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|D7UQ40|SOL5_ALTSO Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 25 317 9.0E-37
sp|D4B1P2|A2372_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 29 324 1.0E-32
sp|Q9LTS3|CKX3_ARATH Cytokinin dehydrogenase 3 OS=Arabidopsis thaliana GN=CKX3 PE=1 SV=1 74 233 5.0E-09
sp|P43485|MCRA_STRLA Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 95 271 1.0E-08
sp|D4B1Z7|A2478_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 147 236 2.0E-08
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[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|D7UQ40|SOL5_ALTSO Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 25 317 9.0E-37
sp|D4B1P2|A2372_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 29 324 1.0E-32
sp|Q9LTS3|CKX3_ARATH Cytokinin dehydrogenase 3 OS=Arabidopsis thaliana GN=CKX3 PE=1 SV=1 74 233 5.0E-09
sp|P43485|MCRA_STRLA Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 95 271 1.0E-08
sp|D4B1Z7|A2478_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 147 236 2.0E-08
sp|P08159|HDNO_ARTOX 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 98 228 5.0E-07
sp|Q9FUJ3|CKX2_ARATH Cytokinin dehydrogenase 2 OS=Arabidopsis thaliana GN=CKX2 PE=1 SV=2 74 254 1.0E-06
sp|Q6YW51|CKX6_ORYSJ Cytokinin dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CKX6 PE=3 SV=1 169 278 7.0E-06
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GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:0000166 nucleotide binding No
GO:0003674 molecular_function No
GO:0043167 ion binding No
GO:0005488 binding No
GO:0097159 organic cyclic compound binding No
GO:1901363 heterocyclic compound binding No
GO:0043168 anion binding No
GO:0003824 catalytic activity No
GO:0036094 small molecule binding No
GO:1901265 nucleoside phosphate binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|014820
MLLTRSLESLAAISLVSGVMADSVGSSGHQGAAGACALLQQKVPHIVHFPGTLEYLTNIDHYEEVATQDSACGVT
PKTVEDVRIIIRTVGRDDVRSPFAIKSGGHALNPGFSSTLGVQISLQNFLDFEYDSKAQTVRLGSAWTWDAVYEK
LQPENVTVVGARISGVGMGALFGGGFSWYTNQHGLAVDNVIAFDLVLPNGTYVNVKQNSHPDLYFGLRGGLNNFG
IVTGATLRTWPSGRIWGGNIEYSIYHKDQVIKAVEEFSMNNKDEKAQLEATYTVTSKRAFWQVLFFYDAPVASPI
PFRRFLSIPSTKDTTKITTHSQLVKDSKSSPVIGSYFHTVPIIHYTARILDVVEKTINASYARSLADERSAGVFY
WIAEPFFNHYSHISYPSAFPHSISNPTTPSCFWFNYTSPRDVEYFRQLIKDAGTEVQKAVVQEGQGHWDDVKYPN
YAVKGTAVEEVYGKSLDRMRALKARIDRKDVMGLQGEGFLI*
Coding >AgabiH97|014820
ATGCTCCTTACTCGCTCATTGGAGTCGCTAGCTGCTATCTCGCTTGTATCTGGTGTGATGGCAGATTCTGTGGGT
TCGTCCGGTCATCAGGGCGCTGCTGGAGCCTGCGCATTACTACAGCAAAAGGTCCCTCATATTGTCCATTTCCCA
GGTACTCTAGAGTATCTAACGAATATAGATCACTATGAAGAAGTGGCAACTCAGGACTCGGCATGTGGAGTCACG
CCGAAGACGGTTGAAGATGTTCGAATTATCATAAGAACTGTTGGTAGGGATGATGTCCGTTCTCCGTTCGCTATC
AAATCTGGTGGTCATGCATTGAATCCCGGATTTTCGTCTACACTTGGCGTTCAAATTTCCTTGCAGAATTTCCTT
GATTTTGAATATGATAGCAAGGCCCAGACAGTTAGGCTAGGGTCTGCTTGGACTTGGGACGCGGTATATGAAAAA
CTCCAACCAGAGAACGTTACAGTTGTAGGAGCGAGAATATCTGGAGTTGGAATGGGCGCGCTCTTTGGCGGCGGA
TTTTCCTGGTATACTAATCAGCATGGGTTAGCTGTGGACAACGTCATCGCATTCGATCTCGTGTTACCAAATGGG
ACTTATGTCAATGTGAAACAAAATTCTCATCCTGATTTGTATTTTGGACTACGAGGTGGTCTTAATAATTTTGGA
ATTGTCACGGGGGCTACTCTTAGAACATGGCCCTCGGGTCGTATCTGGGGAGGAAATATCGAGTACTCGATTTAT
CACAAAGATCAGGTTATCAAAGCTGTGGAAGAATTCAGTATGAACAATAAAGATGAGAAAGCCCAATTGGAAGCT
ACGTACACGGTCACCAGCAAGAGAGCATTCTGGCAGGTTCTATTCTTCTACGACGCACCGGTCGCGTCACCGATT
CCTTTTAGACGATTTCTCTCCATTCCATCAACCAAGGACACAACTAAGATCACGACCCATAGTCAGCTTGTGAAA
GATAGTAAATCTTCCCCCGTCATTGGGTCTTATTTTCATACGGTACCCATTATCCATTATACCGCTCGTATCCTG
GATGTCGTTGAAAAGACAATTAATGCGTCTTACGCGAGGTCTCTGGCTGATGAACGTTCTGCAGGGGTTTTTTAT
TGGATTGCTGAACCGTTCTTCAACCACTACTCGCATATCAGCTATCCCTCAGCTTTCCCACATTCCATATCCAAT
CCGACGACGCCATCGTGTTTCTGGTTTAACTACACCTCGCCTCGCGATGTTGAATATTTCAGACAGTTGATCAAG
GATGCGGGAACGGAGGTACAGAAAGCTGTTGTGCAGGAAGGACAAGGCCATTGGGATGACGTGAAGTATCCAAAC
TACGCGGTCAAAGGAACGGCTGTGGAAGAAGTATATGGAAAGAGCCTAGATCGCATGAGAGCATTGAAGGCAAGA
ATCGACCGGAAGGATGTCATGGGTTTGCAAGGGGAAGGGTTCCTGATATGA
Transcript >AgabiH97|014820
ATGCTCCTTACTCGCTCATTGGAGTCGCTAGCTGCTATCTCGCTTGTATCTGGTGTGATGGCAGATTCTGTGGGT
TCGTCCGGTCATCAGGGCGCTGCTGGAGCCTGCGCATTACTACAGCAAAAGGTCCCTCATATTGTCCATTTCCCA
GGTACTCTAGAGTATCTAACGAATATAGATCACTATGAAGAAGTGGCAACTCAGGACTCGGCATGTGGAGTCACG
CCGAAGACGGTTGAAGATGTTCGAATTATCATAAGAACTGTTGGTAGGGATGATGTCCGTTCTCCGTTCGCTATC
AAATCTGGTGGTCATGCATTGAATCCCGGATTTTCGTCTACACTTGGCGTTCAAATTTCCTTGCAGAATTTCCTT
GATTTTGAATATGATAGCAAGGCCCAGACAGTTAGGCTAGGGTCTGCTTGGACTTGGGACGCGGTATATGAAAAA
CTCCAACCAGAGAACGTTACAGTTGTAGGAGCGAGAATATCTGGAGTTGGAATGGGCGCGCTCTTTGGCGGCGGA
TTTTCCTGGTATACTAATCAGCATGGGTTAGCTGTGGACAACGTCATCGCATTCGATCTCGTGTTACCAAATGGG
ACTTATGTCAATGTGAAACAAAATTCTCATCCTGATTTGTATTTTGGACTACGAGGTGGTCTTAATAATTTTGGA
ATTGTCACGGGGGCTACTCTTAGAACATGGCCCTCGGGTCGTATCTGGGGAGGAAATATCGAGTACTCGATTTAT
CACAAAGATCAGGTTATCAAAGCTGTGGAAGAATTCAGTATGAACAATAAAGATGAGAAAGCCCAATTGGAAGCT
ACGTACACGGTCACCAGCAAGAGAGCATTCTGGCAGGTTCTATTCTTCTACGACGCACCGGTCGCGTCACCGATT
CCTTTTAGACGATTTCTCTCCATTCCATCAACCAAGGACACAACTAAGATCACGACCCATAGTCAGCTTGTGAAA
GATAGTAAATCTTCCCCCGTCATTGGGTCTTATTTTCATACGGTACCCATTATCCATTATACCGCTCGTATCCTG
GATGTCGTTGAAAAGACAATTAATGCGTCTTACGCGAGGTCTCTGGCTGATGAACGTTCTGCAGGGGTTTTTTAT
TGGATTGCTGAACCGTTCTTCAACCACTACTCGCATATCAGCTATCCCTCAGCTTTCCCACATTCCATATCCAAT
CCGACGACGCCATCGTGTTTCTGGTTTAACTACACCTCGCCTCGCGATGTTGAATATTTCAGACAGTTGATCAAG
GATGCGGGAACGGAGGTACAGAAAGCTGTTGTGCAGGAAGGACAAGGCCATTGGGATGACGTGAAGTATCCAAAC
TACGCGGTCAAAGGAACGGCTGTGGAAGAAGTATATGGAAAGAGCCTAGATCGCATGAGAGCATTGAAGGCAAGA
ATCGACCGGAAGGATGTCATGGGTTTGCAAGGGGAAGGGTTCCTGATATGA
Gene >AgabiH97|014820
ATGCTCCTTACTCGCTCATTGGAGTCGCTAGCTGCTATCTCGCTTGTATCTGGTGTGATGGCAGATTCTGTGGGT
TCGTCCGGTCATCAGGGCGCTGCTGGAGCCTGCGCATTACTACAGCAAAAGGTCCCTCATATTGTCCATTTCCCA
GGTTCGTGTACCACTAATGCTACTATGCTTTACCTTGACAAGTTTGCCTAGGTACTCTAGAGTATCTAACGAATA
TAGATCACTATGAAGAAGTGGCAACTCAGGACTCGGCATGTGGAGTCACGCCGAAGACGGTTGAAGATGTTCGAA
TTATCGTATGTTTTTACTATTCCTTGACGGCTTCTCACTTTGGTTATTTCTAGATAAGAACTGTTGGTAGGGATG
ATGTCCGTTCTCCGTTCGCTGTGTGTCTCTCGCTCTTACTGAATCGGCACTTCCCTTCGACTTATGCGCGGTTTA
GATCAAATCTGGTGGTCATGCATTGAATCCCGGATTTTCGTCTACACTTGGCGTTCAAATTTCCTTGCAGAATTT
CCTTGATTTTGAATATGATAGCAAGGCCCAGACAGTTAGGCTAGGGTCTGCTTGGACTTGGGACGCGGTATATGA
AAAACTCCAACCAGAGAACGTTACAGTTGTAGGAGCGAGAATATCTGGAGTTGGTAAGCTCAATGGATCTGAGGT
CTGTTCCCCTGCTTGGCCACCGGCTGATATACCATGGTGCAGGAATGGGCGCGCTCTTTGGCGGCGGATTTTCCT
GGTATACTAATCAGCATGGGTTAGCTGTGGACAACGTCATCGCATTCGATCTCGTGTTACCAAATGGGACTTATG
TCAATGTGAAACAAAATTCTCATCCTGATTTGTATTTTGGACTACGAGGTGGTCTTAATAATTTTGGAATTGTCA
CGGGGGCTACTCTTAGAACATGGCCCTCGGGTCGTATCTGGGTAAATCTCAAGCTCTCGTCCGCGTGACTAACGC
TGAAGCGCTTGTAGGGAGGAAATATCGAGTACTCGATTTATCACAAAGATCAGGTTATCAAAGCTGTGGAAGAAT
TCAGTATGAACAATAAAGATGAGAAAGCCCAATTGGAAGCTACGTACACGGTCACCAGCAAGAGAGTTTGTTTAG
AGTATTTTCAACGATTTTCGAGATTTTAACATTCAGCATCATCCATAGGCATTCTGGCAGGTTCTATTCTTCTAC
GACGCACCGGTCGCGTCACCGATTCCTTTTAGACGATTTCTCTCCATTCCATCAACCAAGGACACAACTAAGATC
ACGACCCATAGTCAGCTTGTGAAAGATAGTAAATCTTCCCCGTAAGTTTGAACCAATCCACATGACGTGTCCTCT
GATATCACGGGTCATTTTCTAGCGTCATTGGGTCTTATTTTCATACGGTACCCATTATCCATTATACCGCTCGTA
TCCTGGATGTCGTTGAAAAGACAATTAATGCGTCTTACGCGAGGTCTCTGGCTGATGAACGTTCTGCAGGGGTTT
TTTATTGGATTGCTGAACCGTTCTTCAACCACTACTCGCATATCAGCTATCCCTCAGCTTTCCCACATTCCATAT
CCAATCCGACGACGCCATCGTGTTTCTGGTTTAACTACACCTCGCCTCGCGATGTTGAATATTTCAGACAGTTGA
TCAAGGATGCGGGAACGGAGGTACAGAAAGCTGTTGTGCAGGAAGGACAAGGCCATTGGGATGACGTGAAGTATC
CAAACTACGCGGTCAAAGGAACGGCTGTGGAAGAAGTATATGGAAAGAGCCTAGATCGCATGAGAGCATTGAAGG
CAAGAATCGACCGGAAGGATGTCATGGGTTTGCAAGGGGAAGGGTTCCTGATATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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