Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|014700
Gene name
Locationscaffold_1:3511342..3512947
Strand-
Gene length (bp)1605
Transcript length (bp)1302
Coding sequence length (bp)1302
Protein length (aa) 434

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.5

Transmembrane Domains

Domain # Start End Length
1 4 26 22
2 80 102 22
3 338 360 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|014700
MAICVFALVFLWLSVAASLVFTVWNLRASQYRTFRCAYDFIENGTSSVGGRYSQLSRWFLLFGENTFKRRFGVDR
MFIRGIRGVISILCLLAMITLGYIVLVVQPTQQQLYLQTLWYPYALEGLRNPNLTVQVALALPVKAFMKGINLGT
IDLNIKWRPESLHVPCHHGGLHVLQVSCNVNSPFSQYPPDDLIITINYTTVLHHPEISMSLFRTAVYLNFNGPGD
SMDPMLDAIVPPIQLYPGLHLFGTTFYSYRDTYASSRDLSFGIPHYDRRLVQNVQALIPDPEVTRTSNSDNTTAT
LRLTYQGGPSFVQSGYKVEREQSSNSVLNGFALLGGVWTFISGLFATIFGCSLLLVLFGIKPLSIYGIVHLFQRR
RSLVDGGYTLSAEEQSRTIAVLREHLLDDNNDIEANGASEEKTKDGEQSVPQARQDVV*
Coding >AgabiH97|014700
ATGGCGATATGTGTTTTCGCATTAGTATTCCTCTGGTTGTCAGTCGCTGCTTCATTAGTCTTCACGGTTTGGAAC
CTTCGCGCCTCTCAGTACCGCACATTCAGGTGCGCATATGACTTTATCGAGAATGGCACTTCGTCTGTCGGCGGG
AGGTATTCACAGCTTAGTCGATGGTTCCTCCTATTCGGAGAAAATACTTTCAAGAGGCGATTTGGAGTTGATCGA
ATGTTCATCAGAGGGATCAGAGGTGTAATTTCTATTCTCTGCCTCCTAGCGATGATTACACTTGGATACATCGTT
TTGGTTGTCCAACCAACGCAGCAGCAGCTTTATCTTCAAACTTTGTGGTATCCGTATGCTCTTGAGGGTTTGAGA
AACCCAAATTTGACGGTGCAAGTGGCTTTGGCTCTGCCCGTAAAAGCATTTATGAAAGGAATCAATCTCGGTACT
ATTGACCTGAACATCAAATGGAGACCTGAATCTTTGCATGTTCCCTGTCATCACGGTGGACTGCATGTGCTGCAG
GTTTCTTGCAATGTAAATTCCCCGTTCTCTCAATATCCGCCCGACGACCTTATCATCACGATCAACTATACAACC
GTTTTACACCATCCCGAGATTTCAATGTCATTGTTTAGAACTGCTGTATATTTGAACTTCAATGGACCGGGAGAT
AGTATGGATCCAATGCTGGATGCTATCGTTCCGCCAATACAGCTATACCCCGGCTTGCATCTCTTTGGAACAACG
TTTTACTCGTACCGGGATACATACGCAAGTTCAAGAGATCTTTCCTTTGGAATACCTCATTATGATAGGAGATTA
GTGCAGAATGTCCAGGCCCTCATACCGGATCCAGAGGTTACTCGTACTTCAAACTCAGACAACACCACAGCTACA
TTGAGGCTGACATATCAAGGAGGTCCTTCCTTCGTGCAATCTGGATATAAAGTTGAAAGAGAACAATCTAGTAAT
TCAGTGCTCAATGGTTTTGCGCTTCTTGGAGGTGTATGGACATTTATCAGTGGTCTTTTCGCAACCATATTCGGT
TGCTCATTACTTTTGGTTCTCTTCGGTATCAAACCACTATCAATTTACGGCATAGTCCATCTTTTTCAACGTCGG
AGGTCCCTCGTAGATGGCGGATATACACTTTCAGCGGAAGAACAAAGTCGGACCATTGCCGTGTTGCGAGAACAT
CTCCTCGATGATAATAATGACATAGAAGCCAATGGTGCTTCTGAGGAAAAGACGAAAGATGGAGAGCAGAGTGTA
CCTCAGGCTCGTCAAGATGTTGTCTAG
Transcript >AgabiH97|014700
ATGGCGATATGTGTTTTCGCATTAGTATTCCTCTGGTTGTCAGTCGCTGCTTCATTAGTCTTCACGGTTTGGAAC
CTTCGCGCCTCTCAGTACCGCACATTCAGGTGCGCATATGACTTTATCGAGAATGGCACTTCGTCTGTCGGCGGG
AGGTATTCACAGCTTAGTCGATGGTTCCTCCTATTCGGAGAAAATACTTTCAAGAGGCGATTTGGAGTTGATCGA
ATGTTCATCAGAGGGATCAGAGGTGTAATTTCTATTCTCTGCCTCCTAGCGATGATTACACTTGGATACATCGTT
TTGGTTGTCCAACCAACGCAGCAGCAGCTTTATCTTCAAACTTTGTGGTATCCGTATGCTCTTGAGGGTTTGAGA
AACCCAAATTTGACGGTGCAAGTGGCTTTGGCTCTGCCCGTAAAAGCATTTATGAAAGGAATCAATCTCGGTACT
ATTGACCTGAACATCAAATGGAGACCTGAATCTTTGCATGTTCCCTGTCATCACGGTGGACTGCATGTGCTGCAG
GTTTCTTGCAATGTAAATTCCCCGTTCTCTCAATATCCGCCCGACGACCTTATCATCACGATCAACTATACAACC
GTTTTACACCATCCCGAGATTTCAATGTCATTGTTTAGAACTGCTGTATATTTGAACTTCAATGGACCGGGAGAT
AGTATGGATCCAATGCTGGATGCTATCGTTCCGCCAATACAGCTATACCCCGGCTTGCATCTCTTTGGAACAACG
TTTTACTCGTACCGGGATACATACGCAAGTTCAAGAGATCTTTCCTTTGGAATACCTCATTATGATAGGAGATTA
GTGCAGAATGTCCAGGCCCTCATACCGGATCCAGAGGTTACTCGTACTTCAAACTCAGACAACACCACAGCTACA
TTGAGGCTGACATATCAAGGAGGTCCTTCCTTCGTGCAATCTGGATATAAAGTTGAAAGAGAACAATCTAGTAAT
TCAGTGCTCAATGGTTTTGCGCTTCTTGGAGGTGTATGGACATTTATCAGTGGTCTTTTCGCAACCATATTCGGT
TGCTCATTACTTTTGGTTCTCTTCGGTATCAAACCACTATCAATTTACGGCATAGTCCATCTTTTTCAACGTCGG
AGGTCCCTCGTAGATGGCGGATATACACTTTCAGCGGAAGAACAAAGTCGGACCATTGCCGTGTTGCGAGAACAT
CTCCTCGATGATAATAATGACATAGAAGCCAATGGTGCTTCTGAGGAAAAGACGAAAGATGGAGAGCAGAGTGTA
CCTCAGGCTCGTCAAGATGTTGTCTAG
Gene >AgabiH97|014700
ATGGCGATATGTGTTTTCGCATTAGTATTCCTCTGGTTGTCAGTCGCTGCTTCATTAGTCTTCACGGTTTGGAAC
CTTCGCGCCTCTCAGTACCGCACATTCAGGTGCGCATATGACTTTATCGAGAATGGCACTTCGTCTGTCGGCGGG
AGGTATTCACAGCTTAGTCGATGGTTCCTCCTATTCGGAGAAAATACTTTCAAGAGGCGATTTGGGTTAGTAGCT
TTTCCCTATAAAACGTTTGAGCCGTGATAACCAGATAGGACCTTTTCTTCCTCTTTTCACAATTTACCAGAGTTG
ATCGAATGTTCATCAGAGGGATCAGAGGTGTAATTTCTATTCTCTGCCTCCTAGCGATGATTACACTTGGATACA
TCGTTTTGGTTGTCCAACCAACGCAGCAGCAGCTTTATCTTCAAACTTTGTGGTATCCGTATGCTCTTGAGGGTT
TGAGAAACCCAAATTTGACGGTGCAAGTGGCTTTGGCTCTGGTAGGTTTCCCCACTTATGCTCGAATTTCCACAC
TTATTAGGGACGTAGCCCGTAAAAGCATTTATGAAAGGAATCAATCTCGGTACTATTGACCTGAACATCAAATGG
AGACCTGAATCTTTGCATGGTAACTCATGGAAGCTACTGGATATTTCAATATAGAGCTTACCATACTTTCAGTTC
CCTGTCATCACGGTGGACTGCATGTGCTGCAGGTTTCTTGCAATGTAAATTCCCCGTTCTCTCAATATCCGCCCG
ACGACCTTATCATCACGATCAACTATACAACCGTTTTACACCATCCCGAGATTTCAATGTCATTGTTTAGAACTG
CTGTATATTTGAACTTCAATGGACCGGGAGATAGTATGGATCCAATGCTGGATGCTATCGTTCCGCCAATACAGC
TATACCCCGGCTTGCATCTCTTTGGAACAACGTTTTACTCGTACCGGGATACATACGCAAGTTCAAGAGATCTTT
CCTTTGGAATACCTCATGTCTGTCACGATTCCAATTATGCCTGATTCTTCCATTCATTACTAACTTTTCAGCGAG
ACAGTATGATAGGAGATTAGTGCAGAATGTCCAGGCCCTCATACCGGATCCAGAGGTTACTCGTACTTCAAACTC
AGACAACACCACAGCTACATTGAGGCTGACATATCAAGGAGGTCCTTCCTTCGTGCAATCTGGATATAAAGTTGA
AAGAGAACAATCTAGTAATTCAGTGCTCAATGGTTTTGCGCTTCTTGGAGGTGTATGGACATTTATCAGTGGTCT
TTTCGCAACCATATTCGGTTGCTCATTACTTTTGGTTCTCTTCGGTACCAAAATTTACTCCGACCTCTTTACTCC
GGCTGATTTCTTCCCCAATCCGACACAGGTATCAAACCACTATCAATTTACGGCATAGTCCATCTTTTTCAACGT
CGGAGGTCCCTCGTAGATGGCGGATATACACTTTCAGCGGAAGAACAAAGTCGGACCATTGCCGTGTTGCGAGAA
CATCTCCTCGATGATAATAATGACATAGAAGCCAATGGTGCTTCTGAGGAAAAGACGAAAGATGGAGAGCAGAGT
GTACCTCAGGCTCGTCAAGATGTTGTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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