Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|014270
Gene name
Locationscaffold_1:3392581..3394809
Strand-
Gene length (bp)2228
Transcript length (bp)1953
Coding sequence length (bp)1953
Protein length (aa) 651

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12937 F-box-like F-box-like 9.9E-07 3 39
PF00646 F-box F-box domain 1.5E-06 2 40

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.6675 0.4868 0.0475 0.0227 0.1319 0.0087 0.41 0.1342 0.2908 0.0055

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Orthologs

Orthofinder run ID1
Orthogroup1379
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|014270
Agaricus bisporus var bisporus H97 AgabiH97|014270 (this protein)
Rhodonia placenta FPRL280 RhoplFPRL280|47_3

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|014270
MLLSLPSELLLSILRHLSLPDLATCILTSKAFKAVIDDCESTVYRQAAAHPSLRLIPHDEVLFSELVPLGLVSSR
FLGKAKTWKQLCRRACDVRQSWLGKGPSRTKSLHNNYHNVHRIKVDEERGFFITTHGSQAIVPFGVFNPNSGGLV
VADITDGTPIWIMYSPRIRSHAHCEYAEGFLVFDRYNGMKEIWRLVSDDLNLRAPEPCEVVPQSQPDERQLSQEH
IISAPGSRFKFVPHALIRPVDDIQTNAYRLSYPTLLSAGGGCLFLWDVRTGKLVERMNDIESQSPAPLGTQHLNH
PDGDNVLDGIRYVDVNDKYAFVCGRRSIKAFRRHTHPDPSPTATQSGSSDGSPTACCVMALFQSDLQREGKWAYE
AQYVEEYELPLGISLPASPESEASTVDWLEDSHDEIPNEGDNRWVTESDEEEREENPGDEQIYLAPGRWRHPEKV
VVRHILAFTSLPVTPRPKVEYGFDQPCVAMHVSPCGEHLAILGPQGRLLIIPYFERVIDRHVEDITDIMIDIQLN
LSYSNSESIYLAYEHGRIAVVTSWGLYIIHPSFPAPDDFYTYPDIHVQRVATLNNTNILREVSCLQMTATAVWLN
WHVELNPDGSVSNDYPSQIQSEESYERGTEVFGEIPRSSTVVSVDFGLGS*
Coding >AgabiH97|014270
ATGTTACTCAGTCTCCCTTCTGAATTGTTATTGTCTATTCTCCGCCACCTATCACTGCCTGATTTGGCTACGTGC
ATCCTTACTTCCAAAGCTTTCAAGGCTGTTATAGATGACTGTGAATCAACTGTATATCGCCAGGCAGCTGCACAC
CCAAGTTTGCGGTTGATTCCCCACGATGAAGTACTCTTCTCTGAACTCGTACCTCTTGGTCTTGTGTCGAGCCGA
TTTTTGGGCAAGGCAAAGACATGGAAGCAACTTTGTCGCAGAGCTTGTGACGTTCGGCAGAGTTGGCTTGGCAAA
GGACCATCGCGGACCAAAAGCCTCCATAATAATTACCATAACGTGCACCGCATCAAAGTTGATGAAGAACGAGGA
TTTTTTATCACGACTCATGGATCACAGGCCATAGTTCCGTTTGGCGTGTTCAACCCCAATTCGGGCGGGTTGGTA
GTGGCTGATATCACTGACGGCACACCAATATGGATAATGTACTCCCCCCGAATTCGTTCACATGCACATTGCGAA
TATGCCGAGGGCTTCCTTGTTTTCGATCGTTACAACGGTATGAAAGAAATTTGGCGACTTGTCAGCGACGATCTC
AATCTGCGCGCTCCTGAACCTTGCGAGGTAGTGCCCCAGTCACAACCTGATGAGCGTCAACTCAGCCAGGAGCAT
ATAATTTCTGCTCCTGGGAGTCGATTCAAATTTGTTCCACACGCGCTCATCCGTCCGGTTGATGATATTCAAACG
AATGCTTACAGATTGTCTTATCCGACATTACTGTCGGCCGGAGGCGGGTGCCTGTTTCTGTGGGATGTGAGGACA
GGGAAGCTAGTCGAAAGGATGAATGACATTGAGTCACAGTCACCTGCACCGCTTGGTACGCAACATTTAAATCAT
CCAGATGGCGATAACGTGCTTGATGGAATTCGCTACGTCGATGTGAACGACAAGTATGCGTTTGTATGTGGTAGA
CGAAGTATCAAAGCATTTCGACGGCATACTCATCCCGATCCTTCACCGACGGCGACGCAATCAGGTTCATCAGAT
GGGTCGCCAACTGCTTGTTGTGTGATGGCACTTTTCCAATCCGATCTCCAACGTGAAGGGAAATGGGCGTATGAG
GCCCAATACGTCGAAGAATATGAATTGCCTCTAGGAATTTCACTCCCCGCATCTCCCGAATCCGAAGCCAGTACA
GTAGACTGGTTGGAAGATTCTCACGACGAGATACCCAATGAGGGTGACAATAGATGGGTTACTGAGAGTGACGAA
GAGGAGAGAGAAGAAAATCCGGGTGACGAACAAATCTATCTTGCTCCCGGTAGATGGCGACACCCCGAAAAAGTG
GTAGTGAGGCACATATTGGCTTTCACTTCTCTACCTGTGACACCAAGGCCAAAAGTCGAATATGGCTTCGATCAG
CCATGTGTGGCAATGCACGTTTCACCTTGTGGAGAGCATCTAGCCATTCTTGGTCCCCAAGGACGCTTGCTGATC
ATACCATACTTTGAAAGGGTCATTGATCGTCACGTTGAAGACATCACCGACATTATGATCGATATACAATTGAAT
CTCTCTTATTCTAATTCGGAATCGATATATCTCGCTTACGAGCATGGCAGGATTGCAGTCGTGACTTCTTGGGGT
CTTTACATCATCCATCCATCGTTCCCAGCTCCAGACGATTTCTATACTTATCCAGACATCCATGTTCAGAGGGTA
GCAACGTTGAACAACACCAATATCCTACGAGAAGTTTCGTGTCTACAAATGACTGCCACGGCAGTTTGGTTAAAT
TGGCATGTTGAGCTGAACCCAGATGGGTCTGTTTCGAATGATTATCCATCTCAGATCCAAAGTGAAGAGTCGTAT
GAAAGAGGTACTGAAGTGTTTGGTGAGATCCCGAGGTCATCAACTGTTGTTAGCGTTGATTTTGGGTTGGGATCG
TGA
Transcript >AgabiH97|014270
ATGTTACTCAGTCTCCCTTCTGAATTGTTATTGTCTATTCTCCGCCACCTATCACTGCCTGATTTGGCTACGTGC
ATCCTTACTTCCAAAGCTTTCAAGGCTGTTATAGATGACTGTGAATCAACTGTATATCGCCAGGCAGCTGCACAC
CCAAGTTTGCGGTTGATTCCCCACGATGAAGTACTCTTCTCTGAACTCGTACCTCTTGGTCTTGTGTCGAGCCGA
TTTTTGGGCAAGGCAAAGACATGGAAGCAACTTTGTCGCAGAGCTTGTGACGTTCGGCAGAGTTGGCTTGGCAAA
GGACCATCGCGGACCAAAAGCCTCCATAATAATTACCATAACGTGCACCGCATCAAAGTTGATGAAGAACGAGGA
TTTTTTATCACGACTCATGGATCACAGGCCATAGTTCCGTTTGGCGTGTTCAACCCCAATTCGGGCGGGTTGGTA
GTGGCTGATATCACTGACGGCACACCAATATGGATAATGTACTCCCCCCGAATTCGTTCACATGCACATTGCGAA
TATGCCGAGGGCTTCCTTGTTTTCGATCGTTACAACGGTATGAAAGAAATTTGGCGACTTGTCAGCGACGATCTC
AATCTGCGCGCTCCTGAACCTTGCGAGGTAGTGCCCCAGTCACAACCTGATGAGCGTCAACTCAGCCAGGAGCAT
ATAATTTCTGCTCCTGGGAGTCGATTCAAATTTGTTCCACACGCGCTCATCCGTCCGGTTGATGATATTCAAACG
AATGCTTACAGATTGTCTTATCCGACATTACTGTCGGCCGGAGGCGGGTGCCTGTTTCTGTGGGATGTGAGGACA
GGGAAGCTAGTCGAAAGGATGAATGACATTGAGTCACAGTCACCTGCACCGCTTGGTACGCAACATTTAAATCAT
CCAGATGGCGATAACGTGCTTGATGGAATTCGCTACGTCGATGTGAACGACAAGTATGCGTTTGTATGTGGTAGA
CGAAGTATCAAAGCATTTCGACGGCATACTCATCCCGATCCTTCACCGACGGCGACGCAATCAGGTTCATCAGAT
GGGTCGCCAACTGCTTGTTGTGTGATGGCACTTTTCCAATCCGATCTCCAACGTGAAGGGAAATGGGCGTATGAG
GCCCAATACGTCGAAGAATATGAATTGCCTCTAGGAATTTCACTCCCCGCATCTCCCGAATCCGAAGCCAGTACA
GTAGACTGGTTGGAAGATTCTCACGACGAGATACCCAATGAGGGTGACAATAGATGGGTTACTGAGAGTGACGAA
GAGGAGAGAGAAGAAAATCCGGGTGACGAACAAATCTATCTTGCTCCCGGTAGATGGCGACACCCCGAAAAAGTG
GTAGTGAGGCACATATTGGCTTTCACTTCTCTACCTGTGACACCAAGGCCAAAAGTCGAATATGGCTTCGATCAG
CCATGTGTGGCAATGCACGTTTCACCTTGTGGAGAGCATCTAGCCATTCTTGGTCCCCAAGGACGCTTGCTGATC
ATACCATACTTTGAAAGGGTCATTGATCGTCACGTTGAAGACATCACCGACATTATGATCGATATACAATTGAAT
CTCTCTTATTCTAATTCGGAATCGATATATCTCGCTTACGAGCATGGCAGGATTGCAGTCGTGACTTCTTGGGGT
CTTTACATCATCCATCCATCGTTCCCAGCTCCAGACGATTTCTATACTTATCCAGACATCCATGTTCAGAGGGTA
GCAACGTTGAACAACACCAATATCCTACGAGAAGTTTCGTGTCTACAAATGACTGCCACGGCAGTTTGGTTAAAT
TGGCATGTTGAGCTGAACCCAGATGGGTCTGTTTCGAATGATTATCCATCTCAGATCCAAAGTGAAGAGTCGTAT
GAAAGAGGTACTGAAGTGTTTGGTGAGATCCCGAGGTCATCAACTGTTGTTAGCGTTGATTTTGGGTTGGGATCG
TGA
Gene >AgabiH97|014270
ATGTTACTCAGTCTCCCTTCTGAATTGTTATTGTCTATTCTCCGCCACCTATCACTGCCTGATTTGGCTACGTGC
ATCCTTACTTCCAAAGCTTTCAAGGCTGTTATAGATGACTGTGAATCAACTGTATATCGCCAGGCAGCTGCACAC
CCAAGTTTGCGGTTGATTCCCCACGATGAAGTACTCTTCTCTGAACTCGTACCTCTTGGTCTTGTGTCGAGCCGA
TTTTTGGGCAAGGCAAAGACATGGAAGCAACTTTGTGAGTAGCCCCTGCTGGTGCTGTCATTTCAACCCATTGAA
TTATCCAGGTCGCAGAGCTTGTGACGTTCGGCAGAGTTGGCTTGGCAAAGGACCATCGCGGACCAAAAGCCTCCA
TAATAATTACCATAACGTGCACCGCATCAAAGTTGATGAAGAACGAGGATTTTTTATCACGACTCATGGATCACA
GGCCATAGTTCCGTTTGGCGTGTTCAACCCCAATTCGGGCGGGTTGGTAGTGGCTGATATCACTGACGGCACACC
AATATGGATAATGTACTCCGTGAGTATCCAGTTTAACCCATCCACTGTGTTTTGATTTCTGATTAAAAACTTCGA
CCCAGCCCCGAATTCGTTCACATGCACATTGCGAATATGCCGAGGGCTTCCTTGTTTTCGATCGTTACAACGGTA
TGAAAGAAATTTGGCGACTTGTCAGCGACGATCTCAATCTGCGCGCTCCTGAACCTTGCGAGGTAGTGCCCCAGT
CACAACCTGATGAGCGTCAACTCAGCCAGGAGCATATAATTTCTGCTCCTGGGAGTCGATTCAAATTTGTTCCAC
ACGCGCTCATCCGTCCGGTTGATGATATTCAAACGAATGCTTACAGATTGTCTTATCCGACATTACTGTCGGCCG
GAGGCGGGTGCCTGTTTCTGTGGGATGTGAGGACAGGGAAGCTAGTCGAAAGGATGAATGACATTGAGTCACAGT
CACCTGCACCGCTTGGTACGCAACATTTAAATCATCCAGATGGCGATAACGTGCTTGATGGAATTCGCTACGTCG
ATGTGAACGACAAGTATGCGTTTGTATGTGGTAGACGAAGTATCAAAGCATTTCGACGGCATACTCATCCCGATC
CTTCACCGACGGCGACGCAATCAGGTTCATCAGATGGGTCGCCAACTGCTTGTTGTGTGATGGCACTTTTCCAAT
CCGATCTCCAACGTGAAGGGAAATGGGCGTATGAGGCCCAATACGTCGAAGAATATGAATTGCCTCTAGGAATTT
CACTCCCCGCATCTCCCGAATCCGAAGCCAGTACAGTAGACTGGTTGGAAGATTCTCACGACGAGATACCCAATG
AGGGTGACAATAGATGGGTTACTGAGAGTGACGAAGAGGAGAGAGAAGAAAATCCGGGTGACGAACAAATCTATC
TTGCTCCCGGTAGATGGCGACACCCCGAAAAAGTGGTAGTGAGGCACATATTGGCTTTCACTTCTCTACCTGTGA
CACCAAGGCCAAAAGTCGAATATGGCTTCGATCAGCCATGTGTGGCAAGTCAGCATGCTCATTCATAAACGACTT
GAATCTTCGACGCTGATCTTCATTTCAGTGCACGTTTCACCTTGTGGAGAGCATCTAGCCATTCTTGGTCCCCAA
GGACGCTTGCTGATCATACCATACTTTGAAAGGGTCATTGATCGTCACGTTGAAGACATCACCGACATTATGATC
GATATACAATTGAATCTCTCTTATTCTAATTCGGAATCGATATATCTCGCTTACGAGCATGGCAGGATTGCAGTC
GTGACTGTACGCCTTTTTCATCCCTTGAATCCTATCGCATCCGTGATTGATCTATGTGTTTTGATATAGTCTTGG
GGTCTTTACATCATCCATCCATCGTTCCCAGCTCCAGACGATTTCTATACTTATCCAGACATCCATGTTCAGAGG
GTAGCAACGTTGAACAACACCAATATCCTACGAGAAGTTTCGTGTCTACAAATGACTGCCACGGCAGTTTGGTTA
AATTGGCATGTTGAGCTGAACCCAGATGGGTCTGTTTCGAATGATTATCCATCTCAGATCCAAAGTGAAGAGTCG
TATGAAAGAGGTACTGAAGTGTTTGGTGAGATCCGTAAGTACGAGCTTTTCATTTTGAATTTGATTACTGATTGT
GAGTAGCGAGGTCATCAACTGTTGTTAGCGTTGATTTTGGGTTGGGATCGTGA

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