Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|013750
Gene name
Locationscaffold_1:3266864..3267928
Strand+
Gene length (bp)1064
Transcript length (bp)957
Coding sequence length (bp)957
Protein length (aa) 319

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13668 Ferritin_2 Ferritin-like domain 3.4E-27 50 182

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|013750
MKALLCSALISLVSPVFFVQAIPTPQSSGIKTIARDTATQLRGKRIADVDILVFRFADLLEQLEGAFYTQALAKF
QDADYEAAGFSGAPAQQLEIIRGQEASHSAFLESAVESAGECPITCNFNFDAVLENVASVLNVARTAEQIGTSAF
AGSAHLIMDLSLRTRAVTILSDEARHNSILNLISNTGAPFPTSFDIALNANEALALVGPFIDGPCDAGIPPNPSL
AITNEEPVTTGSLVTFSSTAFNSSSENLFCQIISGELLTAVSMPLSECTIPMEGVMGPAYIWVTADPEPLPNDVV
TRAMVEVVAGPALAFIDK*
Coding >AgabiH97|013750
ATGAAGGCCTTGTTGTGTTCAGCTCTTATCTCCCTTGTATCTCCCGTATTCTTCGTGCAGGCCATACCTACTCCC
CAAAGCAGTGGAATCAAGACTATTGCCCGCGATACTGCTACCCAACTCCGTGGGAAGCGCATCGCCGACGTCGAC
ATTTTAGTTTTTAGATTTGCCGATCTCCTAGAACAGCTTGAGGGCGCTTTTTACACTCAAGCACTCGCAAAGTTC
CAGGACGCGGATTACGAGGCTGCTGGCTTCTCCGGTGCTCCTGCTCAGCAACTTGAGATAATCCGAGGGCAAGAA
GCTTCACATTCAGCCTTCTTGGAGAGTGCCGTGGAGTCAGCCGGAGAATGTCCCATTACATGCAACTTCAACTTT
GACGCCGTATTGGAAAATGTTGCATCTGTGTTAAACGTCGCTCGTACTGCTGAACAAATCGGCACGTCGGCATTT
GCCGGTTCAGCTCACCTAATCATGGACCTGAGCCTCCGTACCAGAGCGGTAACCATCTTGTCAGATGAGGCACGC
CACAACAGCATTCTGAATCTTATATCCAACACCGGAGCTCCTTTCCCTACTTCCTTCGACATCGCTCTCAACGCC
AACGAAGCCCTGGCCCTAGTTGGGCCATTCATCGACGGTCCATGTGATGCCGGTATCCCTCCCAACCCATCGTTG
GCAATCACAAACGAAGAGCCTGTTACTACAGGAAGTCTCGTCACGTTTAGCTCCACCGCTTTCAACAGCTCATCC
GAGAATCTTTTCTGTCAGATAATAAGCGGTGAATTACTTACGGCAGTGTCTATGCCTCTAAGTGAATGCACTATT
CCTATGGAGGGTGTCATGGGCCCGGCCTATATCTGGGTCACGGCCGATCCAGAACCACTCCCCAACGATGTTGTA
ACTCGTGCGATGGTTGAAGTGGTTGCAGGACCTGCTCTTGCATTCATCGATAAATAG
Transcript >AgabiH97|013750
ATGAAGGCCTTGTTGTGTTCAGCTCTTATCTCCCTTGTATCTCCCGTATTCTTCGTGCAGGCCATACCTACTCCC
CAAAGCAGTGGAATCAAGACTATTGCCCGCGATACTGCTACCCAACTCCGTGGGAAGCGCATCGCCGACGTCGAC
ATTTTAGTTTTTAGATTTGCCGATCTCCTAGAACAGCTTGAGGGCGCTTTTTACACTCAAGCACTCGCAAAGTTC
CAGGACGCGGATTACGAGGCTGCTGGCTTCTCCGGTGCTCCTGCTCAGCAACTTGAGATAATCCGAGGGCAAGAA
GCTTCACATTCAGCCTTCTTGGAGAGTGCCGTGGAGTCAGCCGGAGAATGTCCCATTACATGCAACTTCAACTTT
GACGCCGTATTGGAAAATGTTGCATCTGTGTTAAACGTCGCTCGTACTGCTGAACAAATCGGCACGTCGGCATTT
GCCGGTTCAGCTCACCTAATCATGGACCTGAGCCTCCGTACCAGAGCGGTAACCATCTTGTCAGATGAGGCACGC
CACAACAGCATTCTGAATCTTATATCCAACACCGGAGCTCCTTTCCCTACTTCCTTCGACATCGCTCTCAACGCC
AACGAAGCCCTGGCCCTAGTTGGGCCATTCATCGACGGTCCATGTGATGCCGGTATCCCTCCCAACCCATCGTTG
GCAATCACAAACGAAGAGCCTGTTACTACAGGAAGTCTCGTCACGTTTAGCTCCACCGCTTTCAACAGCTCATCC
GAGAATCTTTTCTGTCAGATAATAAGCGGTGAATTACTTACGGCAGTGTCTATGCCTCTAAGTGAATGCACTATT
CCTATGGAGGGTGTCATGGGCCCGGCCTATATCTGGGTCACGGCCGATCCAGAACCACTCCCCAACGATGTTGTA
ACTCGTGCGATGGTTGAAGTGGTTGCAGGACCTGCTCTTGCATTCATCGATAAATAG
Gene >AgabiH97|013750
ATGAAGGCCTTGTTGTGTTCAGCTCTTATCTCCCTTGTATCTCCCGTATTCTTCGTGCAGGCCATACCTACTCCC
CAAAGCAGTGGAATCAAGACTATTGCCCGCGATACTGCTACCCAACTCCGTGGGAAGCGCATCGCCGACGTCGAC
ATTTTAGTTTTTAGTACGTTTCACGCTCAATGCATTTTTGACAGTCGTTCATATCTGTTGCTCCCACTCAGGATT
TGCCGATCTCCTAGAACAGCTTGAGGGCGCTTTTTACACTCAAGCACTCGCAAAGTTCCAGGACGCGGATTACGA
GGCTGCTGGCTTCTCCGGTGCTCCTGCTCAGCAACTTGAGATAATCCGAGGGCAAGAAGCTTCACATTCAGCCTT
CTTGGAGAGTGCCGTGGAGTCAGCCGGAGAATGTCCCATTACATGCAACTTCAACTTTGACGCCGTATTGGAAAA
TGTTGCATCTGTGTTAAACGTCGCTCGTACTGCTGAACAAATCGGCACGTCGGCATTTGCCGGTTCAGCTCACCT
AATCATGGACCTGAGCCTCCGTACCAGAGCGGTAACCATCTTGTCAGATGAGGCACGCCACAACAGCATTCTGAA
TCTTATATCCAACACCGGAGCTCCTTTCCCTACTTCCTTCGACATCGCTCTCAACGCCAACGAAGCCCTGGCCCT
AGTTGGGCCATTCATCGACGGTCCATGTGATGCCGGTATCCCTCCCAACCCATCGTTGGCAATCACAAACGAAGA
GCCTGTTACTACAGGAAGTCTCGTCACGTTTAGCTCCACCGCTTTCAACAGCTCATCCGTAAATATTTTTCTTTT
TTTTTATAAGATTATCGTTGACTCTGGTCTAGGAGAATCTTTTCTGTCAGATAATAAGCGGTGAATTACTTACGG
CAGTGTCTATGCCTCTAAGTGAATGCACTATTCCTATGGAGGGTGTCATGGGCCCGGCCTATATCTGGGTCACGG
CCGATCCAGAACCACTCCCCAACGATGTTGTAACTCGTGCGATGGTTGAAGTGGTTGCAGGACCTGCTCTTGCAT
TCATCGATAAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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