Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|013480
Gene name
Locationscaffold_1:3205433..3206970
Strand+
Gene length (bp)1537
Transcript length (bp)1356
Coding sequence length (bp)1356
Protein length (aa) 452

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

Domain # Start End Length
1 210 232 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|013480
MGWRRTTLRVALICYVIHRGAAKFFDVVWVSPAEGTTYIAGDTIIGKWTSTTPVVSPNFKLCEVTKEASAKCGTA
IWPQAQELKDGYMVTITAPETSQESRYHLEMQDNFGNVFMSPVFGLGTPSGGKASIFTELSPDLTKYPEFQETPV
GAPTAKASGTAKHPLGSKLSGSLGLATPTHATMTSPHIGMPPSSSTQPDVFVSRRPVPTAAFAVPLSAVAGIIIV
AGLLILNNRRRLAKERKQEFKTLILSKHIEDSEIYGSAGEVQRTMCVLSRKGLSGYYDASELLPISFSRPEPRLA
TRSPFVPMVSASSSSTIFDDGLGYYYGEEPTVMRGKSLTDQYTAAGKKPRSEDYSQPASVIPSGFLPVRMSPAYV
RSHSPELIRSLPVPPVQNALSMTSNGDVFVPPPPQNPQFVLFRIAYVEQISNFAVSIVFDRLWSANNPSNFPMSL
G*
Coding >AgabiH97|013480
ATGGGATGGCGGCGGACAACTTTGAGAGTTGCTTTGATATGCTATGTCATACATCGAGGGGCTGCCAAGTTTTTT
GACGTGGTTTGGGTGTCCCCGGCGGAAGGAACTACATACATAGCTGGAGATACCATCATTGGAAAATGGACGTCA
ACAACACCCGTGGTTTCTCCCAACTTCAAATTATGCGAAGTGACGAAGGAGGCGAGCGCAAAATGTGGAACGGCT
ATCTGGCCTCAGGCACAGGAGTTGAAAGATGGGTATATGGTTACGATAACTGCACCGGAGACTTCCCAAGAGAGC
AGATATCATTTGGAGATGCAAGATAATTTTGGAAATGTGTTCATGTCGCCCGTTTTTGGGCTTGGTACTCCTTCT
GGTGGCAAAGCTTCAATCTTCACGGAACTGTCTCCCGATTTAACAAAGTATCCAGAATTTCAAGAAACGCCTGTC
GGAGCACCGACGGCGAAGGCATCAGGAACCGCCAAACATCCATTGGGCTCCAAGTTGAGCGGTAGCTTGGGACTC
GCGACTCCTACCCATGCAACGATGACTTCCCCACATATCGGAATGCCTCCTTCCTCGTCGACACAACCTGACGTA
TTCGTGTCACGACGCCCTGTCCCGACCGCTGCCTTCGCCGTTCCGCTTTCAGCTGTGGCTGGAATTATCATAGTG
GCTGGTCTACTAATTCTTAACAACAGACGAAGGTTGGCCAAGGAGAGGAAACAGGAGTTCAAAACGCTTATCCTT
TCCAAACATATCGAAGATAGTGAGATATACGGATCTGCGGGAGAAGTACAGCGTACGATGTGCGTCTTGTCGCGG
AAGGGTTTGAGTGGGTACTACGATGCCTCGGAGTTATTACCCATTTCATTCTCAAGACCCGAGCCGAGACTGGCT
ACTCGCAGCCCTTTTGTTCCTATGGTCAGCGCCTCTTCGTCCAGCACTATCTTTGATGATGGTTTGGGATATTAC
TATGGTGAAGAACCTACTGTCATGAGAGGAAAGTCTTTGACGGATCAATATACCGCTGCGGGAAAAAAGCCTCGA
TCGGAGGATTATTCTCAACCAGCTTCAGTCATTCCGTCGGGTTTTCTTCCTGTACGGATGTCACCTGCTTACGTC
CGCTCGCATTCGCCGGAGCTTATACGCTCACTGCCTGTACCTCCTGTTCAAAATGCTTTGTCGATGACGAGTAAT
GGTGATGTCTTTGTTCCCCCGCCTCCCCAAAACCCTCAATTTGTATTGTTCCGTATTGCATATGTCGAGCAGATT
TCGAATTTTGCTGTGTCCATCGTGTTCGATCGCCTTTGGAGTGCGAATAATCCGTCGAATTTTCCTATGTCCTTA
GGGTAG
Transcript >AgabiH97|013480
ATGGGATGGCGGCGGACAACTTTGAGAGTTGCTTTGATATGCTATGTCATACATCGAGGGGCTGCCAAGTTTTTT
GACGTGGTTTGGGTGTCCCCGGCGGAAGGAACTACATACATAGCTGGAGATACCATCATTGGAAAATGGACGTCA
ACAACACCCGTGGTTTCTCCCAACTTCAAATTATGCGAAGTGACGAAGGAGGCGAGCGCAAAATGTGGAACGGCT
ATCTGGCCTCAGGCACAGGAGTTGAAAGATGGGTATATGGTTACGATAACTGCACCGGAGACTTCCCAAGAGAGC
AGATATCATTTGGAGATGCAAGATAATTTTGGAAATGTGTTCATGTCGCCCGTTTTTGGGCTTGGTACTCCTTCT
GGTGGCAAAGCTTCAATCTTCACGGAACTGTCTCCCGATTTAACAAAGTATCCAGAATTTCAAGAAACGCCTGTC
GGAGCACCGACGGCGAAGGCATCAGGAACCGCCAAACATCCATTGGGCTCCAAGTTGAGCGGTAGCTTGGGACTC
GCGACTCCTACCCATGCAACGATGACTTCCCCACATATCGGAATGCCTCCTTCCTCGTCGACACAACCTGACGTA
TTCGTGTCACGACGCCCTGTCCCGACCGCTGCCTTCGCCGTTCCGCTTTCAGCTGTGGCTGGAATTATCATAGTG
GCTGGTCTACTAATTCTTAACAACAGACGAAGGTTGGCCAAGGAGAGGAAACAGGAGTTCAAAACGCTTATCCTT
TCCAAACATATCGAAGATAGTGAGATATACGGATCTGCGGGAGAAGTACAGCGTACGATGTGCGTCTTGTCGCGG
AAGGGTTTGAGTGGGTACTACGATGCCTCGGAGTTATTACCCATTTCATTCTCAAGACCCGAGCCGAGACTGGCT
ACTCGCAGCCCTTTTGTTCCTATGGTCAGCGCCTCTTCGTCCAGCACTATCTTTGATGATGGTTTGGGATATTAC
TATGGTGAAGAACCTACTGTCATGAGAGGAAAGTCTTTGACGGATCAATATACCGCTGCGGGAAAAAAGCCTCGA
TCGGAGGATTATTCTCAACCAGCTTCAGTCATTCCGTCGGGTTTTCTTCCTGTACGGATGTCACCTGCTTACGTC
CGCTCGCATTCGCCGGAGCTTATACGCTCACTGCCTGTACCTCCTGTTCAAAATGCTTTGTCGATGACGAGTAAT
GGTGATGTCTTTGTTCCCCCGCCTCCCCAAAACCCTCAATTTGTATTGTTCCGTATTGCATATGTCGAGCAGATT
TCGAATTTTGCTGTGTCCATCGTGTTCGATCGCCTTTGGAGTGCGAATAATCCGTCGAATTTTCCTATGTCCTTA
GGGTAG
Gene >AgabiH97|013480
ATGGGATGGCGGCGGACAACTTTGAGAGTTGCTTTGATATGCTATGTCATACATCGAGGGGCTGCCAAGTTTTTT
GACGTGGTTTGGGTGTCCCCGGCGGAAGGAACTACATACATAGCTGGAGATACCATCATTGGAAAATGGACGTCA
ACAACACCCGTGGTTTCTCCCAACTTCAAATTATGCGAAGTGACGAAGGAGGCGAGCGCAAAATGTGGAACGGCT
ATCTGGCCTCAGGCACAGGAGTTGAAAGATGGGTATATGGTTACGATGTACGTTTATCCGTATCTTTTTTTCTTT
CGGTTGGCTTACGCTTGTTTAGAACTGCACCGGAGACTTCCCAAGAGAGCAGATATCATTTGGAGATGCAAGATA
ATTTTGGAAATGTGTTCATGTCGCCCGTTTTTGGGCTTGGTAGTAAGTTTTGTCTTTGTATCCCCAAGCATGCCT
CGATAAAGATTTTGATAGCTCCTTCTGGTGGCAAAGCTTCAATCTTCACGGAACTGTCTCCCGATTTAACAAAGT
ATCCAGAATTTCAAGAAACGCCTGTCGGAGCACCGACGGCGAAGGCATCAGGAACCGCCAAACATCCATTGGGCT
CCAAGTTGAGCGGTAGCTTGGGACTCGCGACTCCTACCCATGCAACGATGACTTCCCCACATATCGGAATGCCTC
CTTCCTCGTCGACACAACCTGACGTATTCGTGTCACGACGCCCTGTCCCGACCGCTGCCTTCGCCGTTCCGCTTT
CAGCTGTGGCTGGAATTATCATAGTGGCTGGTCTACTAATTCTTAACAACAGACGAAGGTTGGCCAAGGAGAGGA
AACAGGAGTTCAAAACGCTTATCCTTTCCAAACATATCGAAGATAGTGAGATATACGGATCTGCGGGAGAAGTAC
AGCGTACGATGTGCGTCTTGTCGCGGAAGGGTTTGAGTGGGTACTACGATGCCTCGGAGTTATTACCCATTTCAT
TCTCAAGACCCGAGCCGAGACTGGCTACTCGCAGCCCTTTTGTTCCTATGGTCAGCGCCTCTTCGTCCAGCACTA
TCTTTGATGATGGTTTGGGATATTACTATGGTGAAGAACCTACTGTCATGAGAGGAAAGTCTTTGACGGATCAAT
ATACCGCTGCGGGAAAAAAGCCTCGATCGGAGGATTATTCTCAACCAGCTTCAGTCATTCCGTCGGGTTTTCTTC
CTGTACGGATGTCACCTGCTTACGTCCGCTCGCATTCGCCGGAGCTTATACGCTCACTGCCTGTACCTCCTGTTC
AAAATGCTTTGTCGATGACGAGTAATGGTGATGTGTATGATTTTATAACGGCCGAAGTGAAAAGAAGCTAGCTGT
TTGTTTTTTGACTCTTTTACTCATCACTTCTCTACTAAGCTTTGTTCCCCCGCCTCCCCAAAACCCTCAATTTGT
ATTGTTCCGTATTGCATATGTCGAGCAGATTTCGAATTTTGCTGTGTCCATCGTGTTCGATCGCCTTTGGAGTGC
GAATAATCCGTCGAATTTTCCTATGTCCTTAGGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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