Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|012760
Gene name
Location	scaffold_1:3021811..3022318
Strand	+
Gene length (bp)	507
Transcript length (bp)	507
Coding sequence length (bp)	507
Protein length (aa)	169

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00651	BTB	BTB/POZ domain	7.4E-08	20	123

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0005488	binding	No
GO:0003674	molecular_function	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 20	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|012760 MQAITESFTPVSKDLFIRGADIVFMTDDGTKFHVHAYFFTRESIYWQQKLTGHNEPHHPLSKHYTPNDPYIIQDV DSHDFRKFLRVFYNTRYGDYSFFSNLDWVDILSIAHKWEFPHVKTLSKLYLGKMGYGVVERTCGVHCTRIVDDEM IDRSYPHQVYLISCGHEI*
Coding	>AgabiH97\|012760 ATGCAAGCCATTACCGAATCTTTTACACCGGTTTCAAAAGACCTCTTTATCCGTGGAGCCGACATTGTATTCATG ACCGACGACGGAACCAAATTCCACGTCCATGCCTACTTCTTCACTCGTGAATCTATCTATTGGCAACAAAAACTC ACCGGCCATAACGAACCTCACCATCCTTTATCCAAACACTATACACCAAACGACCCCTACATCATCCAAGATGTA GATTCTCATGATTTTCGAAAATTTCTCCGTGTATTCTATAATACGCGATATGGCGATTACTCTTTCTTTTCCAAC CTCGACTGGGTCGACATCTTATCAATTGCACACAAATGGGAGTTTCCACACGTCAAAACTCTTTCCAAACTTTAT CTTGGAAAAATGGGCTACGGAGTTGTCGAACGAACTTGTGGAGTTCACTGTACTCGAATCGTTGACGATGAAATG ATTGACCGTTCTTATCCTCATCAAGTCTATCTTATTTCGTGTGGACACGAAATCTGA
Transcript	>AgabiH97\|012760 ATGCAAGCCATTACCGAATCTTTTACACCGGTTTCAAAAGACCTCTTTATCCGTGGAGCCGACATTGTATTCATG ACCGACGACGGAACCAAATTCCACGTCCATGCCTACTTCTTCACTCGTGAATCTATCTATTGGCAACAAAAACTC ACCGGCCATAACGAACCTCACCATCCTTTATCCAAACACTATACACCAAACGACCCCTACATCATCCAAGATGTA GATTCTCATGATTTTCGAAAATTTCTCCGTGTATTCTATAATACGCGATATGGCGATTACTCTTTCTTTTCCAAC CTCGACTGGGTCGACATCTTATCAATTGCACACAAATGGGAGTTTCCACACGTCAAAACTCTTTCCAAACTTTAT CTTGGAAAAATGGGCTACGGAGTTGTCGAACGAACTTGTGGAGTTCACTGTACTCGAATCGTTGACGATGAAATG ATTGACCGTTCTTATCCTCATCAAGTCTATCTTATTTCGTGTGGACACGAAATCTGA
Gene	>AgabiH97\|012760 ATGCAAGCCATTACCGAATCTTTTACACCGGTTTCAAAAGACCTCTTTATCCGTGGAGCCGACATTGTATTCATG ACCGACGACGGAACCAAATTCCACGTCCATGCCTACTTCTTCACTCGTGAATCTATCTATTGGCAACAAAAACTC ACCGGCCATAACGAACCTCACCATCCTTTATCCAAACACTATACACCAAACGACCCCTACATCATCCAAGATGTA GATTCTCATGATTTTCGAAAATTTCTCCGTGTATTCTATAATACGCGATATGGCGATTACTCTTTCTTTTCCAAC CTCGACTGGGTCGACATCTTATCAATTGCACACAAATGGGAGTTTCCACACGTCAAAACTCTTTCCAAACTTTAT CTTGGAAAAATGGGCTACGGAGTTGTCGAACGAACTTGTGGAGTTCACTGTACTCGAATCGTTGACGATGAAATG ATTGACCGTTCTTATCCTCATCAAGTCTATCTTATTTCGTGTGGACACGAAATCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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