Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|012160
Gene name
Locationscaffold_1:2892434..2894503
Strand+
Gene length (bp)2069
Transcript length (bp)1404
Coding sequence length (bp)1404
Protein length (aa) 468

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05978 UNC-93 Ion channel regulatory protein UNC-93 3.1E-19 75 407
PF07690 MFS_1 Major Facilitator Superfamily 2.1E-13 75 408

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9URX1|YLX5_SCHPO UNC93-like protein C922.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC922.05c PE=3 SV=1 18 460 1.0E-136
sp|Q8LG53|UN932_ARATH UNC93-like protein 2 OS=Arabidopsis thaliana GN=At1g18010 PE=2 SV=2 28 447 2.0E-103
sp|Q56WD3|UN931_ARATH UNC93-like protein 1 OS=Arabidopsis thaliana GN=At1g18000 PE=2 SV=2 28 447 2.0E-103
sp|O14237|YEL4_SCHPO Uncharacterized membrane protein C6F6.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC6F6.04c PE=4 SV=1 34 462 2.0E-51

GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0051234 establishment of localization No
GO:0008150 biological_process No
GO:0009987 cellular process No
GO:0005215 transporter activity No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 52 0.5

Transmembrane Domains

Domain # Start End Length
1 37 59 22
2 69 91 22
3 96 118 22
4 123 145 22
5 158 180 22
6 190 212 22
7 249 266 17
8 286 303 17
9 315 334 19
10 362 384 22
11 391 413 22
12 423 445 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Casing Casing mycelium 529.40 211.59 847.21
Initials Initials knots 158.63 93.35 223.91
Pileal_Stipeal_center Stage I stipe center 51.22 30.35 72.10
Pileal_Stipeal_shell Stage I stipe shell 16.91 8.95 24.86
DIF_stipe_center Stage II stipe center 49.02 28.56 69.47
DIF_stipe_shell Stage II stipe shell 85.65 50.81 120.49
DIF_stipe_skin Stage II stipe skin 62.87 36.09 89.65
DIF_cap_skin Stage II cap skin 9.74 4.81 14.67
DIF_cap_tissue Stage II cap tissue 15.20 7.97 22.44
DIF_gill_tissue Stage II gill tissue 19.32 10.47 28.17
YFB_stipe_center Young fruiting body stipe center 107.54 63.22 151.87
YFB_stipe_shell Young fruiting body stipe shell 105.31 62.73 147.88
YFB_stipe_skin Young fruiting body stipe skin 56.13 33.29 78.96
YFB_cap_skin Young fruiting body cap skin 7.71 3.67 11.75
YFB_cap_tissue Young fruiting body cap tissue 11.14 5.62 16.65
YFB_gill_tissue Young fruiting body gill tissue 16.80 8.90 24.69
YFB_veil Young fruiting body veil 18.01 9.66 26.37

Differential expression

Label1 Label2 Q-value Significant difference
Casing DIF_gill_tissue 0.000613 yes
Casing YFB_stipe_center 0.000613 yes
Casing YFB_stipe_shell 0.000613 yes
Casing YFB_stipe_skin 0.000613 yes
Casing YFB_cap_skin 0.000613 yes
Casing YFB_cap_tissue 0.000613 yes
Casing YFB_gill_tissue 0.000613 yes
Casing YFB_veil 0.000613 yes
Casing Initials 0.000613 yes
Casing Pileal_Stipeal_center 0.000613 yes
Casing Pileal_Stipeal_shell 0.000613 yes
Casing DIF_stipe_center 0.000613 yes
Casing DIF_stipe_shell 0.000613 yes
Casing DIF_stipe_skin 0.000613 yes
Casing DIF_cap_skin 0.000613 yes
Casing DIF_cap_tissue 0.000613 yes
DIF_gill_tissue YFB_stipe_center 0.000613 yes
DIF_gill_tissue YFB_stipe_shell 0.000613 yes
DIF_gill_tissue YFB_stipe_skin 0.000613 yes
DIF_gill_tissue YFB_cap_skin 0.003365 yes
DIF_gill_tissue YFB_cap_tissue 0.086247 no
DIF_gill_tissue YFB_gill_tissue 0.783552 no
DIF_gill_tissue YFB_veil 0.905191 no
YFB_stipe_center YFB_stipe_shell 0.970225 no
YFB_stipe_center YFB_stipe_skin 0.013186 yes
YFB_stipe_center YFB_cap_skin 0.000613 yes
YFB_stipe_center YFB_cap_tissue 0.000613 yes
YFB_stipe_center YFB_gill_tissue 0.000613 yes
YFB_stipe_center YFB_veil 0.000613 yes
YFB_stipe_shell YFB_stipe_skin 0.016386 yes
YFB_stipe_shell YFB_cap_skin 0.000613 yes
YFB_stipe_shell YFB_cap_tissue 0.000613 yes
YFB_stipe_shell YFB_gill_tissue 0.000613 yes
YFB_stipe_shell YFB_veil 0.000613 yes
YFB_stipe_skin YFB_cap_skin 0.000613 yes
YFB_stipe_skin YFB_cap_tissue 0.000613 yes
YFB_stipe_skin YFB_gill_tissue 0.000613 yes
YFB_stipe_skin YFB_veil 0.000613 yes
YFB_cap_skin YFB_cap_tissue 0.351080 no
YFB_cap_skin YFB_gill_tissue 0.017783 yes
YFB_cap_skin YFB_veil 0.005671 yes
YFB_cap_tissue YFB_gill_tissue 0.252511 no
YFB_cap_tissue YFB_veil 0.148373 no
YFB_gill_tissue YFB_veil 0.910001 no
Initials DIF_gill_tissue 0.000613 yes
Initials YFB_stipe_center 0.199377 no
Initials YFB_stipe_shell 0.166579 no
Initials YFB_stipe_skin 0.000613 yes
Initials YFB_cap_skin 0.000613 yes
Initials YFB_cap_tissue 0.000613 yes
Initials YFB_gill_tissue 0.000613 yes
Initials YFB_veil 0.000613 yes
Initials Pileal_Stipeal_center 0.000613 yes
Initials Pileal_Stipeal_shell 0.000613 yes
Initials DIF_stipe_center 0.000613 yes
Initials DIF_stipe_shell 0.015529 yes
Initials DIF_stipe_skin 0.000613 yes
Initials DIF_cap_skin 0.000613 yes
Initials DIF_cap_tissue 0.000613 yes
Pileal_Stipeal_center DIF_gill_tissue 0.000613 yes
Pileal_Stipeal_center YFB_stipe_center 0.001625 yes
Pileal_Stipeal_center YFB_stipe_shell 0.002951 yes
Pileal_Stipeal_center YFB_stipe_skin 0.848865 no
Pileal_Stipeal_center YFB_cap_skin 0.000613 yes
Pileal_Stipeal_center YFB_cap_tissue 0.000613 yes
Pileal_Stipeal_center YFB_gill_tissue 0.000613 yes
Pileal_Stipeal_center YFB_veil 0.000613 yes
Pileal_Stipeal_center Pileal_Stipeal_shell 0.000613 yes
Pileal_Stipeal_center DIF_stipe_center 0.933586 no
Pileal_Stipeal_center DIF_stipe_shell 0.057155 no
Pileal_Stipeal_center DIF_stipe_skin 0.590358 no
Pileal_Stipeal_center DIF_cap_skin 0.000613 yes
Pileal_Stipeal_center DIF_cap_tissue 0.000613 yes
Pileal_Stipeal_shell DIF_gill_tissue 0.796012 no
Pileal_Stipeal_shell YFB_stipe_center 0.000613 yes
Pileal_Stipeal_shell YFB_stipe_shell 0.000613 yes
Pileal_Stipeal_shell YFB_stipe_skin 0.000613 yes
Pileal_Stipeal_shell YFB_cap_skin 0.015529 yes
Pileal_Stipeal_shell YFB_cap_tissue 0.245540 no
Pileal_Stipeal_shell YFB_gill_tissue 0.991294 no
Pileal_Stipeal_shell YFB_veil 0.915625 no
Pileal_Stipeal_shell DIF_stipe_center 0.000613 yes
Pileal_Stipeal_shell DIF_stipe_shell 0.000613 yes
Pileal_Stipeal_shell DIF_stipe_skin 0.000613 yes
Pileal_Stipeal_shell DIF_cap_skin 0.105377 no
Pileal_Stipeal_shell DIF_cap_tissue 0.848999 no
DIF_stipe_center DIF_gill_tissue 0.000613 yes
DIF_stipe_center YFB_stipe_center 0.001140 yes
DIF_stipe_center YFB_stipe_shell 0.002084 yes
DIF_stipe_center YFB_stipe_skin 0.757397 no
DIF_stipe_center YFB_cap_skin 0.000613 yes
DIF_stipe_center YFB_cap_tissue 0.000613 yes
DIF_stipe_center YFB_gill_tissue 0.000613 yes
DIF_stipe_center YFB_veil 0.000613 yes
DIF_stipe_center DIF_stipe_shell 0.040279 yes
DIF_stipe_center DIF_stipe_skin 0.492518 no
DIF_stipe_center DIF_cap_skin 0.000613 yes
DIF_stipe_center DIF_cap_tissue 0.000613 yes
DIF_stipe_shell DIF_gill_tissue 0.000613 yes
DIF_stipe_shell YFB_stipe_center 0.528695 no
DIF_stipe_shell YFB_stipe_shell 0.577040 no
DIF_stipe_shell YFB_stipe_skin 0.135006 no
DIF_stipe_shell YFB_cap_skin 0.000613 yes
DIF_stipe_shell YFB_cap_tissue 0.000613 yes
DIF_stipe_shell YFB_gill_tissue 0.000613 yes
DIF_stipe_shell YFB_veil 0.000613 yes
DIF_stipe_shell DIF_stipe_skin 0.348154 no
DIF_stipe_shell DIF_cap_skin 0.000613 yes
DIF_stipe_shell DIF_cap_tissue 0.000613 yes
DIF_stipe_skin DIF_gill_tissue 0.000613 yes
DIF_stipe_skin YFB_stipe_center 0.057550 no
DIF_stipe_skin YFB_stipe_shell 0.066956 no
DIF_stipe_skin YFB_stipe_skin 0.806264 no
DIF_stipe_skin YFB_cap_skin 0.000613 yes
DIF_stipe_skin YFB_cap_tissue 0.000613 yes
DIF_stipe_skin YFB_gill_tissue 0.000613 yes
DIF_stipe_skin YFB_veil 0.000613 yes
DIF_stipe_skin DIF_cap_skin 0.000613 yes
DIF_stipe_skin DIF_cap_tissue 0.000613 yes
DIF_cap_skin DIF_gill_tissue 0.027205 yes
DIF_cap_skin YFB_stipe_center 0.000613 yes
DIF_cap_skin YFB_stipe_shell 0.000613 yes
DIF_cap_skin YFB_stipe_skin 0.000613 yes
DIF_cap_skin YFB_cap_skin 0.636479 no
DIF_cap_skin YFB_cap_tissue 0.809222 no
DIF_cap_skin YFB_gill_tissue 0.104432 no
DIF_cap_skin YFB_veil 0.055381 no
DIF_cap_skin DIF_cap_tissue 0.217865 no
DIF_cap_tissue DIF_gill_tissue 0.571041 no
DIF_cap_tissue YFB_stipe_center 0.000613 yes
DIF_cap_tissue YFB_stipe_shell 0.000613 yes
DIF_cap_tissue YFB_stipe_skin 0.000613 yes
DIF_cap_tissue YFB_cap_skin 0.040279 yes
DIF_cap_tissue YFB_cap_tissue 0.433679 no
DIF_cap_tissue YFB_gill_tissue 0.860145 no
DIF_cap_tissue YFB_veil 0.722590 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|012160
MNDQEKPDGTDTSSQVYYERPKGLRGLYSHPLTQVTILGLVCFMCPGLFNALTGLGGGGQVDPITNDHANVALNA
TFSVAAFFAGSINNILGARLTLFIGSCGYALYIGSYLALNIHSNARGFVVGAGAILGICAGLLWTAQGSLMLAYP
TEIQKGRYISIFWAIFNLGGVVGASVSLGTNYNSKANAVGNGTYIGFLVLTLCGTILPLVMVDPKNMIRSDGTKV
TVSKQPSWRTELMRLPRAIRKDPMIILLFPMFLASNWFYTWQFTDYNGAIFNIRARALNNVVYWLAQIVGSILVG
LVLDSKRLRRRIRAFTGWGILFALIWVVHIWGYFYQRQYTRESLSKTDIRMDIFDAPYGGRIMLYIMCGILDATW
QVTTYWIMGAMSNDASTLAYLIGFYKSIQSAGAAGAWAADSRKEPYMNLFVSTWVILLAGLFFALPMIYWRVTDQ
TDTTPDDNTPSDSKADA*
Coding >AgabiH97|012160
ATGAACGACCAAGAGAAACCCGACGGCACTGATACAAGTTCTCAGGTCTATTATGAACGCCCCAAAGGGCTCAGG
GGACTGTATTCTCACCCATTAACTCAGGTGACGATACTTGGCCTCGTTTGTTTCATGTGTCCAGGTCTCTTCAAC
GCCCTTACTGGATTGGGAGGAGGTGGCCAAGTCGACCCCATAACTAACGATCATGCAAACGTGGCACTTAATGCT
ACGTTTTCGGTCGCCGCATTTTTTGCTGGATCCATAAACAATATACTTGGTGCCCGGCTCACTTTATTCATTGGA
AGCTGTGGTTATGCCCTGTACATTGGTTCATATCTGGCTTTGAACATCCACTCCAATGCCCGCGGTTTCGTGGTC
GGGGCTGGCGCTATCCTTGGAATATGTGCTGGTCTGCTATGGACTGCTCAGGGTTCCCTCATGTTAGCATACCCA
ACAGAAATTCAGAAAGGTCGCTACATCAGTATCTTCTGGGCCATTTTCAACTTGGGCGGAGTTGTTGGGGCATCT
GTATCCCTCGGCACAAATTACAATTCCAAGGCCAACGCAGTTGGAAATGGGACATATATTGGGTTTTTGGTCCTT
ACACTATGTGGGACTATCCTCCCCCTTGTCATGGTAGATCCGAAGAATATGATCAGATCAGATGGAACGAAAGTT
ACCGTCTCCAAACAACCTTCTTGGAGGACAGAACTCATGAGGCTCCCCCGCGCCATTAGGAAAGATCCTATGATC
ATATTGCTGTTCCCTATGTTCCTTGCTTCAAACTGGTTCTACACTTGGCAATTCACTGACTACAACGGTGCCATC
TTCAACATCAGAGCGCGTGCCTTGAACAACGTCGTATACTGGCTGGCACAAATTGTGGGGTCGATTCTCGTCGGA
TTGGTCCTCGACAGCAAGCGCCTTCGTCGAAGAATCAGGGCCTTCACTGGCTGGGGTATTCTCTTTGCTCTTATA
TGGGTCGTCCACATCTGGGGCTACTTTTATCAGAGGCAATATACCCGCGAGTCACTTAGCAAGACTGATATCAGG
ATGGATATCTTTGATGCGCCGTACGGAGGAAGAATTATGCTGTATATCATGTGTGGCATTTTGGACGCTACATGG
CAAGTAACGACGTATTGGATCATGGGCGCCATGTCGAACGACGCTTCCACACTAGCATACCTCATTGGATTTTAT
AAATCTATCCAATCTGCAGGAGCCGCAGGAGCCTGGGCTGCGGACAGTCGCAAAGAACCATACATGAACTTATTC
GTTTCCACTTGGGTTATTCTCTTGGCTGGCCTCTTCTTTGCTCTGCCGATGATTTACTGGCGTGTCACTGATCAG
ACAGATACTACTCCGGATGATAACACGCCATCCGATTCGAAGGCGGACGCTTGA
Transcript >AgabiH97|012160
ATGAACGACCAAGAGAAACCCGACGGCACTGATACAAGTTCTCAGGTCTATTATGAACGCCCCAAAGGGCTCAGG
GGACTGTATTCTCACCCATTAACTCAGGTGACGATACTTGGCCTCGTTTGTTTCATGTGTCCAGGTCTCTTCAAC
GCCCTTACTGGATTGGGAGGAGGTGGCCAAGTCGACCCCATAACTAACGATCATGCAAACGTGGCACTTAATGCT
ACGTTTTCGGTCGCCGCATTTTTTGCTGGATCCATAAACAATATACTTGGTGCCCGGCTCACTTTATTCATTGGA
AGCTGTGGTTATGCCCTGTACATTGGTTCATATCTGGCTTTGAACATCCACTCCAATGCCCGCGGTTTCGTGGTC
GGGGCTGGCGCTATCCTTGGAATATGTGCTGGTCTGCTATGGACTGCTCAGGGTTCCCTCATGTTAGCATACCCA
ACAGAAATTCAGAAAGGTCGCTACATCAGTATCTTCTGGGCCATTTTCAACTTGGGCGGAGTTGTTGGGGCATCT
GTATCCCTCGGCACAAATTACAATTCCAAGGCCAACGCAGTTGGAAATGGGACATATATTGGGTTTTTGGTCCTT
ACACTATGTGGGACTATCCTCCCCCTTGTCATGGTAGATCCGAAGAATATGATCAGATCAGATGGAACGAAAGTT
ACCGTCTCCAAACAACCTTCTTGGAGGACAGAACTCATGAGGCTCCCCCGCGCCATTAGGAAAGATCCTATGATC
ATATTGCTGTTCCCTATGTTCCTTGCTTCAAACTGGTTCTACACTTGGCAATTCACTGACTACAACGGTGCCATC
TTCAACATCAGAGCGCGTGCCTTGAACAACGTCGTATACTGGCTGGCACAAATTGTGGGGTCGATTCTCGTCGGA
TTGGTCCTCGACAGCAAGCGCCTTCGTCGAAGAATCAGGGCCTTCACTGGCTGGGGTATTCTCTTTGCTCTTATA
TGGGTCGTCCACATCTGGGGCTACTTTTATCAGAGGCAATATACCCGCGAGTCACTTAGCAAGACTGATATCAGG
ATGGATATCTTTGATGCGCCGTACGGAGGAAGAATTATGCTGTATATCATGTGTGGCATTTTGGACGCTACATGG
CAAGTAACGACGTATTGGATCATGGGCGCCATGTCGAACGACGCTTCCACACTAGCATACCTCATTGGATTTTAT
AAATCTATCCAATCTGCAGGAGCCGCAGGAGCCTGGGCTGCGGACAGTCGCAAAGAACCATACATGAACTTATTC
GTTTCCACTTGGGTTATTCTCTTGGCTGGCCTCTTCTTTGCTCTGCCGATGATTTACTGGCGTGTCACTGATCAG
ACAGATACTACTCCGGATGATAACACGCCATCCGATTCGAAGGCGGACGCTTGA
Gene >AgabiH97|012160
ATGAACGACCAAGAGAAACCCGACGGCACTGATACAAGTTCTCAGGTCTATTATGAACGCCCCAAAGGGCTCAGG
GGACTGTATTCTCACCCATTAACTCAGGTCCTATATTTTTTTCTTTCTCATCGGCGACGAATCTGAAGCTACGCA
GGTGACGATACTTGGCCTCGTTTGTTTCATGTGTCCAGGTATGAGCTAGTCTCAAGACTGGTAATGATGATCGCT
GACACGCCGTAACAGGTCTCTTCAACGCCCTTACTGGATTGGGAGGAGGTGGCCAAGTCGACCCCATAACTAACG
ATCATGCAAACGTGGCACTTAATGCTACGTTTTCGGTCGCCGCATTTTTTGCTGGGTATGCGTATCATCTCTTTC
GCATCTTGTATGGTCACTCGACCAATGCCTAATTGATATAATTTTACAGATCCATAAACAATATACTTGGTGCCC
GGCTCACTTTATTCATTGGAAGCTGTGGTTATGCCCTGTACATTGGTTCATATCTGTGAGTGTCACCAACTACAT
GAACGATTGACTGATGTTTTGAACTTTTCTCACAGGGCTTTGAACATCCACTCCAATGCCCGCGGTTTCGTGGTC
GGGGCTGGCGCTATCCTTGGAATATGTGCTGGTCTGCTATGGACTGCTCAGGGTTCCCTCATGTTAGCATACCCA
ACAGAAATTCAGAAAGGTCGCTACATCAGTATCTTCTGGGCCATTTTCAACTTGGGCGGAGTTGTTGGGGCATCT
GTATCCCTCGGCACAAATTACAATTCCAAGGTTCGTCCTCCTGGCATTCGTGGTTTCACATGTATTGACCTTATT
TATTGTAGGCCAACGCAGGTACGTTTATCGGTTCGAAATATTGGCTGTGCAATTCTAAACATAAGCACCTCCAGT
TGGAAATGGGACATATGTCAGTCGAATTTACCCCTTTATAGAGTATCAGAAGACTAACGTATCGAAAGATTGGGT
TTTTGGTCCTTACACTATGTGGGACTATCCTCCCCCTTGTCATGGTAGATCCGAAGAATATGATCAGATCAGATG
GAACGAAAGTTACCGTCTCCAAACAACCTTCTTGGAGGACAGAACTCATGAGGCTCCCCCGCGCCATTAGGAAAG
ATCCTATGATCATATTGCTGTTCCCTATGTTCCTTGCTTCAAACTGGTTCTACACTTGGCGTATGAATATCACCT
TACATCGATATTACTCAACTACTAATGCTCATAACCATAGAATTCACTGACTACAACGGTGCCATCTTCAACATC
AGAGCGCGTGCCTTGAACAACGTCGTATACTGGCTGGCACAAATTGTGGGGTCGATTCTCGTCGGATTGGTCCTC
GACAGCAAGCGCCTTCGTCGAAGAATCAGGGCCTTCACTGGCTGGGGTATTCTCTTTGCTCTTATATGGGTCGTC
CACATCTGGGGCTACTTTTATCAGAGGTGAGTACAAGTCGAGCCAGAAAGAAACGTGACTAATTCAATTGCTGTA
CAGGCAATATACCCGCGAGTCACTTAGCAAGACTGATATCAGGATGGATATCTTTGATGCGCCGTACGGAGGAAG
AATTATGCTGTATATCATGTGTGGCATTTTGGACGCTACATGGCAAGTAACGACGTATTGGATCATGGGCGCCAT
GTCGAACGACGCTTCCACACTAGCATACCTCATTGGATTTTGTGAGCTTCTCCTAATATTCGCAGATAGTCATAA
CGCGTTACTGATTGAACCCTAGATAAATCTATCCAATCTGCAGGAGCCGCAGGAGCCTGGGCTGCGGACAGTCGC
AAAGAACCGTGAGTTGCCTTTTTCCCCTAGCCTCCATCTGGATTCGTGTCTTGACGCAATTCGACTAGATACATG
AACTTATTCGTTTCCACTTGGGTTATTCTCTTGGCTGGCCTCTTCTTTGCTCTGCCGATGATTTACTGGCGTGTC
ACTGATCAGACAGATACTACTCCGGATGATAACACGTGAGTAATGGTCATTCATCAGAAAATACATCACACTGAA
GTATAAATCAATGCAGGCCATCCGATTCGAAGGCGGACGCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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