Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|011420
Gene name
Locationscaffold_1:2699387..2702059
Strand-
Gene length (bp)2672
Transcript length (bp)1890
Coding sequence length (bp)1890
Protein length (aa) 630

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 1.0E-11 450 628

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q08280|BSC6_YEAST Bypass of stop codon protein 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BSC6 PE=1 SV=1 99 623 3.0E-12

GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0051234 establishment of localization No
GO:0008150 biological_process No
GO:0009987 cellular process No
GO:0005215 transporter activity No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

Domain # Start End Length
1 177 199 22
2 214 236 22
3 274 296 22
4 300 322 22
5 329 351 22
6 361 383 22
7 447 466 19
8 481 500 19
9 513 532 19
10 542 564 22
11 569 591 22
12 601 623 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|011420
MATWLTTAVDESCHTNGEFRGRRRSSVYPLTSVPRLFFPSQSNAVHQASENYPDESALEDEIELTPRDADPLTNT
GNLFASSKLDSPAIEISPLSHAHVSDYASKLTVPRHHDSKGKTADYKEPPTPILGQESTPTTAVSSRKGSYDELI
SGTTRASAEPVDGGGTTRPFERMKWRLAAGFFAFFMCGWGDGITGTVLPLFMADFNINFTMSSLLYAANLIGFLS
GTLLVESILKILSRTSLNQKRSAWYPYIRFGKKIGSIGVPRSFVQSRHLVVVYGGLVHGSFFVMMGLKTGYPLTF
IAYVASAFSRGIVTAAMNLYFKTVLPQSIAYSYGVWGIGSLLSPLICQSLISAGIPWNQFYFGSLVLAAFNFGFL
TVTFRPTINEWVKERRTDPKRPIVRRDSDNSTATILGQNTTNAVSPSTENTLVSNPHRSALRWALSLKMQWLFSL
FIFLYYGCETTTQAFIVSYLLKTRNANPNTVGYVSSGFWAGISIGRIAWGYYMSRFSFTQRKWLIHASITLGLVL
ELLIWFVNSNIGDAFSTGIIGLVFGPVYPAVLSLATALLPQEVHLVTMGLIGSAGSLGAAVFPFIAGVVSTSHGV
QIVPRVSVGLAGIIFSMWFFFPSRPSSGN*
Coding >AgabiH97|011420
ATGGCTACTTGGCTAACCACTGCTGTAGATGAATCTTGCCATACTAACGGGGAATTCCGTGGTAGACGTCGTAGT
TCGGTCTATCCCCTCACTTCTGTTCCTCGTTTGTTCTTTCCTTCACAGAGCAATGCTGTCCACCAGGCTTCTGAG
AACTACCCGGATGAAAGTGCTCTTGAGGACGAAATTGAACTGACTCCACGCGATGCTGATCCTTTGACCAACACG
GGGAATTTATTTGCTTCTTCTAAATTGGACAGTCCAGCTATAGAAATCTCCCCGCTTTCTCATGCTCATGTATCG
GACTATGCGTCAAAGTTGACTGTCCCAAGGCATCATGACTCCAAGGGAAAAACGGCTGACTATAAGGAACCACCG
ACGCCCATTTTAGGACAGGAATCAACTCCAACTACTGCTGTGAGCAGTCGCAAAGGATCTTACGATGAACTTATT
TCCGGAACAACGCGTGCTTCTGCTGAACCTGTTGATGGCGGTGGTACCACACGACCTTTCGAACGAATGAAATGG
AGACTCGCGGCTGGATTTTTCGCTTTTTTCATGTGTGGGTGGGGCGATGGAATTACCGGAACGGTTCTTCCACTG
TTTATGGCCGATTTCAATATCAACTTTACGATGTCTTCTTTACTCTATGCAGCAAATTTGATTGGTTTTCTTTCA
GGGACTCTCCTCGTGGAGAGTATTTTGAAGATATTGTCGCGCACGAGCTTAAACCAAAAACGAAGCGCCTGGTAT
CCTTATATTCGTTTTGGCAAAAAGATCGGCAGTATCGGTGTTCCAAGATCTTTTGTTCAATCTCGACACCTTGTA
GTCGTATATGGTGGTTTGGTGCACGGTTCATTCTTTGTCATGATGGGTTTGAAAACCGGTTACCCCCTTACGTTC
ATAGCATATGTTGCTTCCGCTTTTTCCAGGGGAATAGTGACTGCTGCAATGAACCTTTATTTTAAAACAGTATTG
CCGCAATCTATCGCATATAGCTATGGCGTTTGGGGTATCGGTAGCTTACTTTCGCCATTGATATGCCAGTCGCTC
ATATCAGCTGGCATACCCTGGAATCAATTCTATTTTGGTTCTCTTGTTCTCGCTGCATTCAACTTCGGCTTTTTG
ACCGTCACGTTCCGGCCGACCATTAACGAATGGGTCAAGGAACGTCGTACGGATCCGAAGAGACCCATTGTAAGG
AGAGATAGCGATAATTCTACCGCCACCATTCTAGGCCAAAACACAACTAATGCCGTTTCTCCCTCGACGGAGAAT
ACACTTGTCTCGAATCCTCATCGAAGTGCTCTTCGCTGGGCCCTTAGCTTAAAGATGCAATGGTTATTTTCACTA
TTCATCTTCCTATACTATGGATGTGAAACAACCACGCAGGCTTTTATTGTGTCCTATCTCTTGAAGACGCGGAAT
GCAAATCCCAATACAGTTGGTTACGTTTCGTCAGGTTTCTGGGCCGGTATCTCAATCGGAAGAATTGCTTGGGGA
TATTACATGTCAAGATTCAGCTTTACACAAAGAAAGTGGTTGATACATGCTAGTATCACTTTGGGATTGGTCTTG
GAATTACTCATCTGGTTTGTGAACTCAAATATCGGGGATGCATTCTCGACAGGCATCATTGGCCTTGTCTTTGGA
CCTGTTTATCCTGCTGTCCTTTCCCTTGCCACTGCACTTTTGCCGCAAGAGGTTCATCTGGTCACCATGGGCTTA
ATTGGTTCAGCCGGAAGCCTTGGCGCAGCGGTGTTTCCCTTCATAGCCGGTGTCGTCTCGACCTCACATGGGGTG
CAAATTGTGCCCCGTGTTTCGGTGGGGTTGGCAGGGATAATTTTCAGTATGTGGTTCTTCTTCCCCTCTCGACCT
TCTTCTGGGAATTGA
Transcript >AgabiH97|011420
ATGGCTACTTGGCTAACCACTGCTGTAGATGAATCTTGCCATACTAACGGGGAATTCCGTGGTAGACGTCGTAGT
TCGGTCTATCCCCTCACTTCTGTTCCTCGTTTGTTCTTTCCTTCACAGAGCAATGCTGTCCACCAGGCTTCTGAG
AACTACCCGGATGAAAGTGCTCTTGAGGACGAAATTGAACTGACTCCACGCGATGCTGATCCTTTGACCAACACG
GGGAATTTATTTGCTTCTTCTAAATTGGACAGTCCAGCTATAGAAATCTCCCCGCTTTCTCATGCTCATGTATCG
GACTATGCGTCAAAGTTGACTGTCCCAAGGCATCATGACTCCAAGGGAAAAACGGCTGACTATAAGGAACCACCG
ACGCCCATTTTAGGACAGGAATCAACTCCAACTACTGCTGTGAGCAGTCGCAAAGGATCTTACGATGAACTTATT
TCCGGAACAACGCGTGCTTCTGCTGAACCTGTTGATGGCGGTGGTACCACACGACCTTTCGAACGAATGAAATGG
AGACTCGCGGCTGGATTTTTCGCTTTTTTCATGTGTGGGTGGGGCGATGGAATTACCGGAACGGTTCTTCCACTG
TTTATGGCCGATTTCAATATCAACTTTACGATGTCTTCTTTACTCTATGCAGCAAATTTGATTGGTTTTCTTTCA
GGGACTCTCCTCGTGGAGAGTATTTTGAAGATATTGTCGCGCACGAGCTTAAACCAAAAACGAAGCGCCTGGTAT
CCTTATATTCGTTTTGGCAAAAAGATCGGCAGTATCGGTGTTCCAAGATCTTTTGTTCAATCTCGACACCTTGTA
GTCGTATATGGTGGTTTGGTGCACGGTTCATTCTTTGTCATGATGGGTTTGAAAACCGGTTACCCCCTTACGTTC
ATAGCATATGTTGCTTCCGCTTTTTCCAGGGGAATAGTGACTGCTGCAATGAACCTTTATTTTAAAACAGTATTG
CCGCAATCTATCGCATATAGCTATGGCGTTTGGGGTATCGGTAGCTTACTTTCGCCATTGATATGCCAGTCGCTC
ATATCAGCTGGCATACCCTGGAATCAATTCTATTTTGGTTCTCTTGTTCTCGCTGCATTCAACTTCGGCTTTTTG
ACCGTCACGTTCCGGCCGACCATTAACGAATGGGTCAAGGAACGTCGTACGGATCCGAAGAGACCCATTGTAAGG
AGAGATAGCGATAATTCTACCGCCACCATTCTAGGCCAAAACACAACTAATGCCGTTTCTCCCTCGACGGAGAAT
ACACTTGTCTCGAATCCTCATCGAAGTGCTCTTCGCTGGGCCCTTAGCTTAAAGATGCAATGGTTATTTTCACTA
TTCATCTTCCTATACTATGGATGTGAAACAACCACGCAGGCTTTTATTGTGTCCTATCTCTTGAAGACGCGGAAT
GCAAATCCCAATACAGTTGGTTACGTTTCGTCAGGTTTCTGGGCCGGTATCTCAATCGGAAGAATTGCTTGGGGA
TATTACATGTCAAGATTCAGCTTTACACAAAGAAAGTGGTTGATACATGCTAGTATCACTTTGGGATTGGTCTTG
GAATTACTCATCTGGTTTGTGAACTCAAATATCGGGGATGCATTCTCGACAGGCATCATTGGCCTTGTCTTTGGA
CCTGTTTATCCTGCTGTCCTTTCCCTTGCCACTGCACTTTTGCCGCAAGAGGTTCATCTGGTCACCATGGGCTTA
ATTGGTTCAGCCGGAAGCCTTGGCGCAGCGGTGTTTCCCTTCATAGCCGGTGTCGTCTCGACCTCACATGGGGTG
CAAATTGTGCCCCGTGTTTCGGTGGGGTTGGCAGGGATAATTTTCAGTATGTGGTTCTTCTTCCCCTCTCGACCT
TCTTCTGGGAATTGA
Gene >AgabiH97|011420
ATGGCTACTTGGCTAACCACTGCTGTAGATGAATCTTGCCATACTAACGGGGAATTCCGTGGTAGACGTCGTAGT
TCGGTCTATCCCCTCACTTCTGTTCCTCGTTTGTTCTTTCCTTCACAGAGCAATGCTGTCCACCAGGCTTCTGAG
AACTACCCGGATGAAAGTGCTCTTGAGGACGAAATTGAACTGACTCCACGCGATGCTGATCCTTTGACCAACACG
GGGAATTTATTTGCTTCTTCTAAATTGGACAGTCCAGCTATAGAAATCTCCCCGCTTTCTCATGCTCATGTATCG
GACTATGCGTCAAAGTTGACTGTCCCAAGGCATCATGACTCCAAGGGAAAAACGGCTGACTATAAGGAACCACCG
ACGCCCATTTTAGGACAGGAATCAACTCCAACTACTGCTGTGAGCAGTCGCAAAGGATCTTACGATGAACTTATT
TCCGGAACAACGCGTGCTTCTGCTGAACCTGTTGATGGCGGTGGTACCACACGACCTTTCGAACGAATGAAATGG
AGACTCGCGGCTGGATTTTTCGCTTTTTTCATGTGTGGGTGGGGCGATGGAAGTAAGTTCACCGATTCTTTCCCT
GTCGGAATCTTGTTCACGCCAAATATTTCTCTCGCAGTTACCGGAACGGTTCTTCCACGTAAGCGTGATCTTCTC
TAAGCTTTCTTCAATTTTTGGAACGGAGTTGATCTCGCCACCCAGTGTTTATGGCCGATTTCAATATCAACTTTA
CGATGTCTTCTTTACTCTATGCAGCAAATTTGATTGGGTAAGGATACGCCATTACTATCAACTCCATCGCCACTA
AGGTTCTTCTATTCTAGTTTTCTTTCAGGGACTCTCCTCGTGGAGAGTATTTTGAAGATATTGTCGCGCACGAGC
TTAAACCAAAAACGAAGCGCCTGGTATCCTTATATTCGTTTTGGCAAAAAGATCGGCAGTATCGGTGTTCCAAGA
TCTTTTGTTCAATCTCGACACCTTGTAGTCGTATATGGTGGTTTGGTGCACGGTTCATTCTTTGTCATGATGGGT
TTGAAAACCGGTTACCCCCTTACGTTCATAGCATATGTTGCTTCCGCTTTTTCCAGGGGAATAGTGACTGGTGAG
CGTTTCTATTTTTTGGGAAGAAGTACTGGTCATTGACTGTGGTGTCCATGGTAGCTGCAATGTAGGCAGATTATG
AAATAGTCTCAATTAATCGCTCACCACGATCTTCGTAGGAACCTTTATTTTAAAACAGTATTGCCGCAATCTATC
GCATATAGCTATGGCGTTTGGGGTGAGTACCCTCACGTTAAACAACGACTTGACGATGTGATGCTGACGTTCCCA
GGTATCGGTAGCTTACTTTCGCCATTGATATGCCAGTCGCTCATATCAGCTGGCATACCCTGGAATCAATTCTAT
TTTGGTTCTCTTGTTCTCGCTGCATTCAACTTCGGCTTTTTGACCGTCACGTTCCGGCCGACCATTAACGAATGG
GTCAAGGAACGTCGTACGGATCCGAAGAGACCCATTGTAAGGAGAGATAGCGATAATTCTACCGCCACCATTCTA
GGCCAAAACACAACTAATGCCGTTTCTCCCTCGACGGAGAATACACTTGTCTCGAATCCTCATCGAAGTGGTAAG
CCTCATTCGGCCAGAAGTGGCAGAATTTTACTGACTTGAGTATGGAATAGCTCTTCGCTGGGCCCTTAGCTTAAA
GATGCAATGGTTATTTTCACTATTCATCTTCCTATACTATGGATGGTAAGTCTTATTATAGTATTACTTGATGAA
GCGCTAATGATGCATCAACCCAGTGAAACAACCACGCAGGCTTTTGTACCTCAACCCATTCAATGTATCCTTTTA
CCGTAACTGATGATACATCCATTTTTAGATTGTGTCCTATCTCTTGAAGACGCGGGTAGGTCGACCCCATGCAGT
TTCTCCTCGTCTCAATTTTATTCATAAAAAAATGCCAGAATGCAAATCCCAATACAGTTGGTTACGTTTCGTCAG
GTTTCTGGGCCGGTATCTCAATCGGAAGAATTGCTTGGGGATATTACATGTCAAGGTAAAATATCATCCACTAGG
GTCGGAATGATTACTCACAGGCGGACAGATTCAGCTTTACACAAAGAAAGTGGTTGATACATGCTAGTATCAGTA
CGTCACATCTGGCGTATCATAAACATGTCTATTTATCCCTTGTTCATTAGCTTTGGGATTGGTCTTGGAATTACT
CATCTGGTTTGTGAACTCAAATATCGGGGATGCATTCTCGACAGGCATCATTGGCCTTGTCTTTGGACCTGTTTA
TCCTGCTGTCCTTTCCCTTGCCACTGCACTTTTGCCGCAAGAGGTTCATCTGGTCACCATGGGCTTAATGTCAGT
CTCATATCCTTCCAAAGCTCGCAACGATCTGATTCATATTTATCAAATTTCAGTGGTTCAGCCGGAAGCCTTGGC
GCAGGTTCGTTTCTTCGAATTTGTTAACGTGAAATTTGTATTCTAATGAATTATCAACAGCGGTGTTTCCCTTCA
TAGCCGGTGTCGTCTCGACCTCACATGGGGTGCAAATTGTGCCCCGTGTTTCGGTGGGGTTGGCAGGGATAATTT
TCAGTATGTGGTTCTTCTTCCCCTCTCGACCTTCTTCTGGGAATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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