© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|011110 |
| Gene name | |
| Location | scaffold_1:2623520..2625435 |
| Strand | + |
| Gene length (bp) | 1915 |
| Transcript length (bp) | 1248 |
| Coding sequence length (bp) | 1248 |
| Protein length (aa) | 416 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00704 | Glyco_hydro_18 | Glycosyl hydrolases family 18 | 2.5E-25 | 36 | 304 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P29026|CHI1_RHIOL | Chitinase 1 OS=Rhizopus oligosporus GN=CHI1 PE=1 SV=1 | 35 | 326 | 7.0E-90 |
| sp|P29027|CHI2_RHIOL | Chitinase 2 OS=Rhizopus oligosporus GN=CHI2 PE=1 SV=1 | 35 | 316 | 3.0E-88 |
| sp|P29025|CHI1_RHINI | Chitinase 1 OS=Rhizopus niveus GN=CHI1 PE=3 SV=1 | 35 | 316 | 4.0E-84 |
| sp|P29029|CHIT_YEAST | Endochitinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CTS1 PE=1 SV=2 | 10 | 320 | 4.0E-74 |
| sp|P40954|CHI3_CANAL | Chitinase 3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CHT3 PE=1 SV=2 | 10 | 309 | 2.0E-73 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P29026|CHI1_RHIOL | Chitinase 1 OS=Rhizopus oligosporus GN=CHI1 PE=1 SV=1 | 35 | 326 | 7.0E-90 |
| sp|P29027|CHI2_RHIOL | Chitinase 2 OS=Rhizopus oligosporus GN=CHI2 PE=1 SV=1 | 35 | 316 | 3.0E-88 |
| sp|P29025|CHI1_RHINI | Chitinase 1 OS=Rhizopus niveus GN=CHI1 PE=3 SV=1 | 35 | 316 | 4.0E-84 |
| sp|P29029|CHIT_YEAST | Endochitinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CTS1 PE=1 SV=2 | 10 | 320 | 4.0E-74 |
| sp|P40954|CHI3_CANAL | Chitinase 3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CHT3 PE=1 SV=2 | 10 | 309 | 2.0E-73 |
| sp|D4B4X4|CHI33_ARTBC | Class III chitinase ARB_03514 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03514 PE=1 SV=2 | 34 | 323 | 1.0E-62 |
| sp|P40953|CHI2_CANAL | Chitinase 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CHT2 PE=1 SV=1 | 34 | 317 | 7.0E-61 |
| sp|Q12713|CHI33_TRIHA | Endochitinase 33 OS=Trichoderma harzianum GN=chit33 PE=1 SV=1 | 22 | 320 | 7.0E-60 |
| sp|P19172|CHIA_ARATH | Acidic endochitinase OS=Arabidopsis thaliana GN=CHIB1 PE=2 SV=2 | 36 | 302 | 1.0E-56 |
| sp|Q5AAH2|CHI1_CANAL | Chitinase 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CHT1 PE=1 SV=1 | 33 | 326 | 2.0E-55 |
| sp|P46876|CHI1_CANAX | Chitinase 1 OS=Candida albicans GN=CHT1 PE=3 SV=2 | 33 | 325 | 3.0E-55 |
| sp|P36910|CHIE_BETVU | Acidic endochitinase SE2 OS=Beta vulgaris GN=SE2 PE=1 SV=1 | 16 | 301 | 3.0E-55 |
| sp|P29060|CHIA_TOBAC | Acidic endochitinase OS=Nicotiana tabacum PE=1 SV=1 | 32 | 301 | 4.0E-55 |
| sp|P51614|CHIT3_VITVI | Acidic endochitinase OS=Vitis vinifera GN=CHIT3 PE=2 SV=1 | 19 | 302 | 3.0E-54 |
| sp|P23472|CHLY_HEVBR | Hevamine-A OS=Hevea brasiliensis PE=1 SV=2 | 36 | 302 | 5.0E-54 |
| sp|P29024|CHIA_PHAAN | Acidic endochitinase OS=Phaseolus angularis PE=2 SV=1 | 19 | 302 | 7.0E-54 |
| sp|P36908|CHIA_CICAR | Acidic endochitinase OS=Cicer arietinum PE=2 SV=1 | 36 | 302 | 2.0E-50 |
| sp|P17541|CHIA_CUCSA | Acidic endochitinase OS=Cucumis sativus PE=1 SV=1 | 28 | 301 | 6.0E-49 |
| sp|P29061|CHIB_TOBAC | Basic endochitinase OS=Nicotiana tabacum PE=2 SV=1 | 32 | 302 | 1.0E-48 |
| sp|E9ENC6|CHI3_METRA | Endochitinase 3 OS=Metarhizium robertsii (strain ARSEF 23 / ATCC MYA-3075) GN=chi3 PE=3 SV=1 | 13 | 320 | 2.0E-48 |
| sp|P54197|CHI2_COCP7 | Endochitinase 2 OS=Coccidioides posadasii (strain C735) GN=CTS2 PE=3 SV=2 | 34 | 309 | 6.0E-46 |
| sp|Q1EAR5|CHI2_COCIM | Endochitinase 2 OS=Coccidioides immitis (strain RS) GN=CTS2 PE=3 SV=2 | 34 | 309 | 9.0E-46 |
| sp|Q873Y0|CHIA1_ASPFM | Endochitinase A1 OS=Neosartorya fumigata GN=chiA1 PE=1 SV=1 | 8 | 310 | 2.0E-43 |
| sp|Q6QDR4|CHI3_METAN | Endochitinase 3 (Fragment) OS=Metarhizium anisopliae GN=chi3 PE=1 SV=1 | 36 | 312 | 2.0E-43 |
| sp|E9F9R9|CHI2_METRA | Endochitinase 2 OS=Metarhizium robertsii (strain ARSEF 23 / ATCC MYA-3075) GN=chi2 PE=3 SV=2 | 38 | 320 | 3.0E-43 |
| sp|Q4U4T0|CHI2_METAN | Endochitinase 2 OS=Metarhizium anisopliae GN=chi2 PE=1 SV=1 | 38 | 306 | 1.0E-42 |
| sp|Q4WEP7|CHIA1_ASPFU | Endochitinase A1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=chiA1 PE=3 SV=1 | 23 | 310 | 2.0E-42 |
| sp|A2QUQ2|CHIA1_ASPNC | Endochitinase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=ctcA PE=2 SV=1 | 13 | 309 | 8.0E-41 |
| sp|G5EB30|CHIA1_EMENI | Endochitinase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=chiA PE=1 SV=1 | 8 | 310 | 2.0E-40 |
| sp|Q92223|CHIA1_EMEND | Endochitinase A OS=Emericella nidulans GN=chiA PE=2 SV=3 | 8 | 310 | 2.0E-40 |
| sp|Q9C105|YKT4_SCHPO | Chitinase-like protein PB1E7.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB1E7.04c PE=3 SV=1 | 7 | 318 | 4.0E-40 |
| sp|D4AT07|CHI1_ARTBC | Probable endochitinase ARB_07371 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07371 PE=3 SV=1 | 33 | 303 | 3.0E-39 |
| sp|P49347|CONB_CANEN | Concanavalin B OS=Canavalia ensiformis PE=1 SV=1 | 25 | 302 | 2.0E-28 |
| sp|Q8L5C6|XIP1_WHEAT | Xylanase inhibitor protein 1 OS=Triticum aestivum GN=XIPI PE=1 SV=2 | 23 | 302 | 1.0E-24 |
| sp|Q7GCM7|XIP1_ORYSJ | Xylanase inhibitor protein 1 OS=Oryza sativa subsp. japonica GN=RIXI PE=1 SV=1 | 27 | 302 | 7.0E-24 |
| sp|Q53NL5|XIP2_ORYSJ | Xylanase inhibitor protein 2 OS=Oryza sativa subsp. japonica GN=Chib3H-h PE=1 SV=1 | 35 | 302 | 9.0E-22 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005975 | carbohydrate metabolic process | Yes |
| GO:0008152 | metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 28 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|011110 MSLHWGVRLILYALCILGLIDLPCVVAFANNRSDNLAVYWGQDAAGHQRELSFYCQDDTIDIIPLAFLYVFFGEG GKPVINLANICSPGGKEFANSDLVDCSFMASDIKQCQAKGKKITLSLGGATAKVGFKSKSQAEDFAKDVWDMFLG GRSNTRPFGQATLDGIDLDIENGSSSYYSDFVNKIRSLSKGLKKRYYITAAPQCPFPDAKVGDALNKADFDAVYV QFYNNYCEASSPSAFNFDTWDEWAKTKSPNPDVKVYIGAPAGPKAASSGYVDANALIKVAKDARKKYSSFGGVML WDADMAYNNDKFHVKIKKGISTGPPTIDDDDRADEDDRADDDRTDDDDRTNDDDRADDNDRVDDDDRASVSPAKL NDFEDPRATARVKRPSITINQRDVEPTNMQPRVSSRWFRL* |
| Coding | >AgabiH97|011110 ATGAGTCTCCACTGGGGAGTTAGACTCATCCTTTATGCCCTATGCATACTTGGGTTGATCGACTTGCCCTGCGTA GTTGCCTTCGCCAACAATCGTTCGGACAATCTTGCCGTGTACTGGGGGCAAGATGCTGCAGGCCACCAACGGGAA TTGTCTTTCTATTGCCAGGATGATACTATTGATATCATTCCCCTCGCCTTCCTTTATGTGTTCTTCGGAGAGGGT GGGAAGCCCGTAATCAACTTGGCAAATATATGCTCCCCGGGCGGAAAGGAATTTGCTAATTCCGACCTAGTGGAT TGCTCTTTCATGGCTTCAGACATTAAGCAATGTCAGGCCAAAGGGAAAAAAATCACGCTCAGCCTTGGTGGCGCT ACTGCCAAAGTTGGATTCAAGAGTAAATCTCAGGCGGAAGACTTCGCCAAGGATGTGTGGGATATGTTCTTAGGA GGACGGAGCAATACACGTCCATTTGGCCAGGCCACTCTCGATGGCATTGACTTGGATATCGAAAACGGCTCTTCG TCTTACTATTCAGACTTCGTTAACAAAATTCGTTCCCTGTCAAAGGGACTCAAGAAGCGTTATTATATCACAGCT GCACCCCAATGTCCTTTCCCAGACGCCAAGGTGGGAGATGCCCTCAATAAGGCCGACTTTGATGCTGTCTATGTC CAATTTTACAATAATTACTGTGAAGCATCAAGCCCATCTGCGTTCAACTTTGACACATGGGACGAATGGGCCAAA ACAAAATCACCGAATCCGGACGTCAAGGTCTACATTGGCGCACCAGCTGGACCCAAAGCCGCGAGCTCAGGTTAT GTTGATGCCAACGCTCTCATCAAAGTTGCTAAAGACGCTAGAAAAAAATACTCCTCCTTTGGAGGTGTGATGCTT TGGGATGCTGATATGGCCTACAATAATGACAAATTTCACGTAAAGATAAAGAAAGGGATATCGACAGGACCACCC ACGATAGATGATGACGATAGGGCAGATGAGGACGATAGGGCAGACGACGATAGAACAGATGATGACGATAGAACA AATGATGACGATAGGGCAGATGATAACGATAGGGTGGATGACGACGATAGGGCAAGCGTTTCACCAGCAAAATTG AATGATTTCGAAGACCCTCGAGCAACAGCCCGGGTGAAGCGGCCAAGCATAACGATCAACCAACGAGACGTAGAG CCTACAAACATGCAGCCAAGAGTGTCGTCTCGTTGGTTCCGCTTATGA |
| Transcript | >AgabiH97|011110 ATGAGTCTCCACTGGGGAGTTAGACTCATCCTTTATGCCCTATGCATACTTGGGTTGATCGACTTGCCCTGCGTA GTTGCCTTCGCCAACAATCGTTCGGACAATCTTGCCGTGTACTGGGGGCAAGATGCTGCAGGCCACCAACGGGAA TTGTCTTTCTATTGCCAGGATGATACTATTGATATCATTCCCCTCGCCTTCCTTTATGTGTTCTTCGGAGAGGGT GGGAAGCCCGTAATCAACTTGGCAAATATATGCTCCCCGGGCGGAAAGGAATTTGCTAATTCCGACCTAGTGGAT TGCTCTTTCATGGCTTCAGACATTAAGCAATGTCAGGCCAAAGGGAAAAAAATCACGCTCAGCCTTGGTGGCGCT ACTGCCAAAGTTGGATTCAAGAGTAAATCTCAGGCGGAAGACTTCGCCAAGGATGTGTGGGATATGTTCTTAGGA GGACGGAGCAATACACGTCCATTTGGCCAGGCCACTCTCGATGGCATTGACTTGGATATCGAAAACGGCTCTTCG TCTTACTATTCAGACTTCGTTAACAAAATTCGTTCCCTGTCAAAGGGACTCAAGAAGCGTTATTATATCACAGCT GCACCCCAATGTCCTTTCCCAGACGCCAAGGTGGGAGATGCCCTCAATAAGGCCGACTTTGATGCTGTCTATGTC CAATTTTACAATAATTACTGTGAAGCATCAAGCCCATCTGCGTTCAACTTTGACACATGGGACGAATGGGCCAAA ACAAAATCACCGAATCCGGACGTCAAGGTCTACATTGGCGCACCAGCTGGACCCAAAGCCGCGAGCTCAGGTTAT GTTGATGCCAACGCTCTCATCAAAGTTGCTAAAGACGCTAGAAAAAAATACTCCTCCTTTGGAGGTGTGATGCTT TGGGATGCTGATATGGCCTACAATAATGACAAATTTCACGTAAAGATAAAGAAAGGGATATCGACAGGACCACCC ACGATAGATGATGACGATAGGGCAGATGAGGACGATAGGGCAGACGACGATAGAACAGATGATGACGATAGAACA AATGATGACGATAGGGCAGATGATAACGATAGGGTGGATGACGACGATAGGGCAAGCGTTTCACCAGCAAAATTG AATGATTTCGAAGACCCTCGAGCAACAGCCCGGGTGAAGCGGCCAAGCATAACGATCAACCAACGAGACGTAGAG CCTACAAACATGCAGCCAAGAGTGTCGTCTCGTTGGTTCCGCTTATGA |
| Gene | >AgabiH97|011110 ATGAGTCTCCACTGGGGAGTTAGACTCATCCTTTATGCCCTATGCATACTTGGGTTGATCGACTTGCCCTGCGTA GTTGCCTTCGCCAACAATCGTTCGGACAATGTAAGTGTTCATTTAACTCAGAATGATGAATGTTATAACCAAGTC TATGCCACAGCTTGCCGTGTAAGCAATACGTTTCCGATGCTAATTTCGCCATGATTTTGATAAGGCTCCAGGTAC TGGGGGCAAGATGCTGCAGGCCACCAACGGGAGTAAGTAACTGTCACCAGTATCAGATATTCGTGATAACATACG GTTGCCCCTAGATTGTCTTTCTATTGCCAGGATGATACTATTGATATCATTCCCCTCGCCTTCCTTTATGTGTTC TTCGGAGAGGGTGGGAAGCCCGTAATCAACTTGGCAAATGTGCGTAGTTGCATATTCTACTTGCAGACATTTCAT GCTCATGGAAACTGTTTAAAGATATGCTCCCCGGGCGGAAAGGAATTTGCTAATTCCGACCTAGTGGATTGCTCT TTCATGGCTTCAGACATTAAGCAATGTCAGGCCAAAGGGAAAAAAATCACGCTCAGCCTTGGTGGCGCTACTGCC AAAGTTGGATTCAAGAGTAAATCTCAGGCGGAAGACTTCGCCAAGGATGTGTGGGATATGTTCTTAGGTATGAAT TCATTCTCACGCATTTGTTTGATATAAGCGTAATTGAATGGTTATAGGAGGACGTGAGTATTTATTGGCATGAAA ACCGCAGAATCGTTTCGGGGTGATCTGATTGAAACCTAGGGAGCAATACACGTCCATTTGGCCAGGCCACTCTCG ATGGGTACGCAACCATCGATTTTTTTATGATTGTTTTTTTTATTCGTCTTTTAGCATTGACTTGGATATCGAAAA CGGCTCTTCGTCTTACTATTCAGACTTCGTTAACAAAATTCGTTCCCTGTCAAAGGGACTCAAGAAGCGGTATGG CGAGAACGCAACGTTTCCATTTTTGTTCACTCACGCAACATGTAGTTATTATATCACAGCTGCACCCCAATGTCC TTTCCCAGACGCCAAGGTGGGAGATGCCCTCAATAAGGCCGACTTTGATGCTGTCTATGTCCAATTTTGTAATGG TTTATTTTTCGAACGGGCTTCATGTGATTCTAATTTTCTCATCAGACAATAATTACTGTGAAGCATCAAGCCCAT CTGTACGTCTAGTGCTATTAATATCTGACTTTTAAACGCAAAGCTGACGCGATAAGGCGTTCAACTTTGACACAT GGTACTGCCCGCGATTGAGTCTGTGTTACTGAGCCAAATTTACTCACCTTGAGTTTCCAGGGACGAATGGGCCAA AACAAAATCACCGAATCCGGACGTCAAGGTCTACATTGGCGCACCAGCTGGACCCAAAGCCGCGAGCTCAGGTTA TGTTGATGCCAACGCTCTCATCAAAGTTGCTAAAGACGCTAGAAAAAAATACTCCTCCTTTGGAGGTGTGATGCT TTGGGATGCTGATATGGCCTACAGTGCGTTTATCATTTATAATTGCAGAAAATGGTGGAATCTGGTCATTCAACA TTAATTCCGTACAGATAATGACAAATTTCACGTAAAGATAAAGAAAGGGATATCGACAGGACCACCCACGATAGA TGATGACGATAGGGCAGATGAGGACGATAGGGCAGACGACGATAGAACAGATGATGACGATAGAACAAATGATGA CGATAGGGCAGATGATAACGATAGGGTGGATGACGACGATAGGGCAAGCGTTTCACCAGCAAAATTGAATGATTT CGAAGACCCTCGAGCAACAGCCCGGGTGAAGCGGCCAAGCATAACGATCAACCAACGAGACGTAGAGCCTACAAA CATGCAGCCAAGAGTGTCGTCTCGTTGGTTCCGCTTATGA |