Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|010910
Gene name
Location	scaffold_1:2579184..2580372
Strand	+
Gene length (bp)	1188
Transcript length (bp)	1020
Coding sequence length (bp)	1020
Protein length (aa)	340

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00096	zf-C2H2	Zinc finger, C2H2 type	3.9E-05	245	267

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P34694\|TF3A_ANAAE	Transcription factor IIIA OS=Anaxyrus americanus GN=gtf3a PE=2 SV=1	223	320	2.0E-08
sp\|P78871\|RST2_SCHPO	Zinc finger protein rst2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rst2 PE=2 SV=2	197	302	2.0E-07
sp\|Q5AMH6\|CAS5_CANAL	Cell wall integrity transcriptional regulator CAS5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAS5 PE=3 SV=1	238	300	3.0E-07
sp\|Q804Q5\|FEZF2_DANRE	Fez family zinc finger protein 2 OS=Danio rerio GN=fezf2 PE=1 SV=2	243	306	3.0E-06
sp\|Q2TAR3\|FEZF2_XENLA	Fez family zinc finger protein 2 OS=Xenopus laevis GN=fezf2 PE=2 SV=1	243	305	4.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 33	0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class (based on PFAM domains)
C2H2 zinc finger

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|010910 MTDSSLSTPGFEPYPMDYKQSGFDFLFQNVDTLPSHPDLGEFESEIDSSLAGFEGPEHLQYLVQNDYSFLKPGSG PLSAFTDSAYESSSTHSESAYNPPSPNSGSTYSYAGSTYSSAIELENMALDFQAVCVDDNYATQSSITGHDSVDP TSFGPLPPTPPRSPPTHIAAAKPYARAAYSDYGPPRRNSMASGMYPQITFNTAPLGAHDTVSPINISSQLPQIQQ PVIQSRSMVDQQKADPRKKYKCSHCPRAFARAYNLKTHKATHDPNRLKPHVCHHRSCGRSFSRKHDLGRHLVSIH RDESTLIDPPSPVKSIIAHLVIATMSSKLALAAHMNVSN*
Coding	>AgabiH97\|010910 ATGACGGATTCCTCGCTTTCTACACCAGGCTTTGAGCCCTATCCGATGGACTACAAACAATCTGGTTTTGACTTC CTCTTCCAAAACGTGGATACCTTGCCTTCACACCCAGACCTCGGGGAGTTCGAATCCGAGATTGATTCAAGTCTT GCAGGATTTGAGGGCCCGGAACATCTCCAATATCTCGTACAGAATGACTACTCCTTCCTCAAGCCTGGAAGTGGC CCTCTTTCCGCGTTTACCGATTCGGCTTACGAGTCCTCATCCACGCACTCTGAAAGTGCCTATAATCCCCCCTCT CCCAACTCTGGTTCCACGTACTCCTACGCTGGTTCTACATACTCCTCTGCTATCGAGTTGGAAAATATGGCATTA GACTTTCAAGCTGTTTGTGTCGATGACAACTACGCTACCCAATCGAGTATCACCGGGCATGACTCGGTTGATCCC ACGTCGTTCGGCCCCTTGCCACCCACCCCGCCCCGCAGTCCTCCCACACACATTGCTGCGGCGAAGCCCTATGCC AGAGCTGCTTACTCTGACTATGGTCCGCCCAGGCGCAACTCCATGGCTTCGGGCATGTACCCACAAATCACATTT AATACCGCACCTCTTGGTGCCCATGACACAGTCTCCCCTATCAACATATCTTCTCAGTTGCCCCAAATCCAACAA CCAGTAATTCAATCTCGTTCAATGGTTGACCAACAGAAAGCGGACCCAAGAAAGAAGTACAAGTGCTCGCACTGT CCCCGAGCATTTGCGCGTGCATACAATCTGAAGACGCACAAGGCTACACATGACCCCAATCGCCTGAAGCCCCAC GTCTGCCATCATCGTAGCTGTGGCAGGTCATTCAGTCGCAAACATGACTTGGGCCGTCATCTCGTCAGCATTCAT CGCGACGAGAGCACACTCATTGACCCGCCTTCCCCTGTAAAATCTATCATTGCGCACCTTGTGATTGCCACGATG TCAAGTAAATTAGCACTGGCTGCGCATATGAATGTCTCGAATTGA
Transcript	>AgabiH97\|010910 ATGACGGATTCCTCGCTTTCTACACCAGGCTTTGAGCCCTATCCGATGGACTACAAACAATCTGGTTTTGACTTC CTCTTCCAAAACGTGGATACCTTGCCTTCACACCCAGACCTCGGGGAGTTCGAATCCGAGATTGATTCAAGTCTT GCAGGATTTGAGGGCCCGGAACATCTCCAATATCTCGTACAGAATGACTACTCCTTCCTCAAGCCTGGAAGTGGC CCTCTTTCCGCGTTTACCGATTCGGCTTACGAGTCCTCATCCACGCACTCTGAAAGTGCCTATAATCCCCCCTCT CCCAACTCTGGTTCCACGTACTCCTACGCTGGTTCTACATACTCCTCTGCTATCGAGTTGGAAAATATGGCATTA GACTTTCAAGCTGTTTGTGTCGATGACAACTACGCTACCCAATCGAGTATCACCGGGCATGACTCGGTTGATCCC ACGTCGTTCGGCCCCTTGCCACCCACCCCGCCCCGCAGTCCTCCCACACACATTGCTGCGGCGAAGCCCTATGCC AGAGCTGCTTACTCTGACTATGGTCCGCCCAGGCGCAACTCCATGGCTTCGGGCATGTACCCACAAATCACATTT AATACCGCACCTCTTGGTGCCCATGACACAGTCTCCCCTATCAACATATCTTCTCAGTTGCCCCAAATCCAACAA CCAGTAATTCAATCTCGTTCAATGGTTGACCAACAGAAAGCGGACCCAAGAAAGAAGTACAAGTGCTCGCACTGT CCCCGAGCATTTGCGCGTGCATACAATCTGAAGACGCACAAGGCTACACATGACCCCAATCGCCTGAAGCCCCAC GTCTGCCATCATCGTAGCTGTGGCAGGTCATTCAGTCGCAAACATGACTTGGGCCGTCATCTCGTCAGCATTCAT CGCGACGAGAGCACACTCATTGACCCGCCTTCCCCTGTAAAATCTATCATTGCGCACCTTGTGATTGCCACGATG TCAAGTAAATTAGCACTGGCTGCGCATATGAATGTCTCGAATTGA
Gene	>AgabiH97\|010910 ATGACGGATTCCTCGCTTTCTACACCAGGCTTTGAGCCCTATCCGATGGACTACAAACAATCTGGTTTTGACTTC CTCTTCCAAAACGTGGATACCTTGCCTTCACACCCAGACCTCGGGGAGTTCGAATCCGAGATTGATTCAAGTCTT GCAGGATTTGAGGGCCCGGAACATCTCCAATATCTCGTACAGAATGACTACTCCTTCCTCAAGCCTGGAAGTGGC CCTCTTTCCGCGTTTACCGATTCGGCTTACGAGTCCTCATCCACGCACTCTGAAAGTGCCTATAATCCCCCCTCT CCCAACTCTGGTTCCACGTACTCCTACGCTGGTTCTACATACTCCTCTGCTATCGAGTTGGAAAATATGGCATTA GACTTTCAAGCTGTTTGTGTCGATGACAACTACGCTACCCAATCGAGTATCACCGGGCATGACTCGGTTGATCCC ACGTCGTTCGGCCCCTTGCCACCCACCCCGCCCCGCAGTCCTCCCACACACATTGCTGCGGCGAAGCCCTATGCC AGAGCTGCTTACTCTGACTATGGTCCGCCCAGGCGCAACTCCATGGCTTCGGGCATGTACCCACAAATCACATTT AATACCGCACCTCTTGGTGCCCATGACACAGTCTCCCCTATCAACATATCTTCTCAGTTGCCCCAAATCCAACAA CCAGTAATTCAATCTCGTTCAATGGTTGACCAACAGAAAGCGGACCCAAGAAAGAAGTACAAGTGCTCGCACTGT CCCCGAGGTACTTGACTCCGCTTCGTCTTCTCACCATCATATCTAATTTTGACCTTTCCAGCATTTGCGCGTGCA TACAATCTGAAGACGCACAAGGCTACACATGACCCCAATCGCCTGAAGCCCCACGTCTGCCATCATCGTAGCTGT GGCAGGTCATTCAGTCGCAAACATGACTTGGGCCGTCATCTCGTCAGCATTCATCGCGACGAGAGCACACTCATT GACCCGCCTTCCCCTGTAAAATCTATCATTGGTATCGAGAGGGGTAGCAGAGTTCGCTGCAACAATTGTGGCAAG AGTTGGATCGGCCGCAGCGCACCTTGTGATTGCCACGATGTCAAGTAAATTAGCACTGGCTGCGCATATGAATGT CTCGGTGAATTCTCATCCGACTATTACCAAACCTGAATTACTAATTTTTTTTCTTAGAATTGA

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