Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|010770
Gene name
Location	scaffold_1:2546365..2547900
Strand	+
Gene length (bp)	1535
Transcript length (bp)	1314
Coding sequence length (bp)	1314
Protein length (aa)	438

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00293	NUDIX	NUDIX domain	2.4E-06	99	205

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O13717\|YDZA_SCHPO	Uncharacterized protein C14C4.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC14C4.10c PE=3 SV=1	105	254	3.0E-15

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 27	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	413	435	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|010770 MSAEKANPPPLSVTPLLARALQRIRATPPRIIASPPTQPRRAAVALIVRVVPSPTAKLPDPTSPPPSLTEFFEED WVNDPGSRAEILFLHRQADFADNVALTQSRTTNGREAHVAFPGGRTERDDEGGLYTAMRQTWEEIGIDLAEKNYT CVGQLDDREITTSLGKRLLMILSPFVFLQVTPTASPPDPIATTSLHWIPLASLVSPISSPKWSSVTVDAASRIVR RNSTALRVLIRALVGSMKFPAIIIEHGPSPPINSGRTAPLQKSEKKLTSPHDVIEKGYSPKVLKLWGLSLGMTLD LMSYMILPESSRDMMPPKEEGNNSPLSHYMQLPYQDVVEDFRVEYVAPSLASVFPKFSYPDVNFWIWVFGKRYRE VIRGWETSLRGGGVNDRRINWSGSALSTFYAAIRKALVVVIVARALGILFGIAFAGWWIFSQ*
Coding	>AgabiH97\|010770 ATGTCTGCCGAAAAAGCGAATCCTCCGCCGCTCTCAGTCACGCCGCTCCTCGCCCGCGCCCTCCAGCGCATCCGC GCAACCCCGCCACGCATCATCGCATCTCCTCCTACCCAACCTCGTCGGGCCGCGGTCGCTCTCATAGTTCGCGTC GTACCTTCACCAACCGCAAAACTCCCAGATCCTACATCCCCACCTCCCTCTCTTACCGAGTTCTTTGAAGAAGAT TGGGTCAACGATCCGGGTTCTCGCGCAGAAATCCTTTTCCTACACCGTCAGGCAGACTTTGCAGACAATGTGGCA TTGACACAAAGTCGTACGACCAATGGGCGTGAGGCTCACGTTGCTTTTCCCGGTGGTAGAACTGAGCGAGACGAC GAGGGCGGCTTGTACACGGCAATGCGTCAAACATGGGAAGAAATTGGTATCGACCTCGCTGAAAAAAACTACACA TGCGTTGGCCAGCTGGACGACCGCGAAATCACTACCTCACTCGGGAAACGGCTGCTTATGATCCTCTCCCCTTTT GTTTTTCTCCAAGTTACGCCCACAGCCTCTCCTCCCGATCCAATTGCTACGACCTCTCTTCATTGGATACCGCTC GCTTCCCTTGTCTCACCTATTTCCTCCCCTAAGTGGTCTTCCGTTACCGTTGATGCAGCGTCTCGGATCGTGCGC CGCAATTCTACCGCCCTTCGCGTCCTGATTCGCGCCCTTGTGGGTAGTATGAAATTTCCCGCTATCATTATCGAA CATGGACCCTCCCCTCCCATCAACTCCGGCCGCACAGCTCCTTTGCAAAAGAGCGAGAAAAAGCTGACGAGCCCG CATGATGTCATTGAAAAGGGCTATTCTCCCAAAGTCCTCAAACTCTGGGGGCTTTCCCTTGGCATGACTCTTGAC CTCATGTCCTACATGATTTTACCCGAATCCTCACGCGACATGATGCCGCCTAAAGAAGAAGGCAACAACTCGCCG CTATCACATTACATGCAGTTACCCTATCAGGATGTCGTGGAGGACTTTCGTGTGGAGTATGTGGCCCCCAGTCTT GCAAGCGTATTTCCAAAGTTTTCCTATCCCGACGTCAACTTTTGGATCTGGGTATTTGGTAAACGTTATCGAGAG GTTATCCGTGGCTGGGAGACAAGTTTACGTGGCGGAGGTGTAAATGACCGCCGAATAAATTGGTCAGGGTCTGCC CTGAGTACCTTTTACGCTGCCATCCGCAAGGCTTTAGTTGTCGTCATCGTTGCTCGTGCACTTGGTATCTTGTTT GGTATCGCCTTTGCAGGTTGGTGGATCTTTAGCCAGTAG
Transcript	>AgabiH97\|010770 ATGTCTGCCGAAAAAGCGAATCCTCCGCCGCTCTCAGTCACGCCGCTCCTCGCCCGCGCCCTCCAGCGCATCCGC GCAACCCCGCCACGCATCATCGCATCTCCTCCTACCCAACCTCGTCGGGCCGCGGTCGCTCTCATAGTTCGCGTC GTACCTTCACCAACCGCAAAACTCCCAGATCCTACATCCCCACCTCCCTCTCTTACCGAGTTCTTTGAAGAAGAT TGGGTCAACGATCCGGGTTCTCGCGCAGAAATCCTTTTCCTACACCGTCAGGCAGACTTTGCAGACAATGTGGCA TTGACACAAAGTCGTACGACCAATGGGCGTGAGGCTCACGTTGCTTTTCCCGGTGGTAGAACTGAGCGAGACGAC GAGGGCGGCTTGTACACGGCAATGCGTCAAACATGGGAAGAAATTGGTATCGACCTCGCTGAAAAAAACTACACA TGCGTTGGCCAGCTGGACGACCGCGAAATCACTACCTCACTCGGGAAACGGCTGCTTATGATCCTCTCCCCTTTT GTTTTTCTCCAAGTTACGCCCACAGCCTCTCCTCCCGATCCAATTGCTACGACCTCTCTTCATTGGATACCGCTC GCTTCCCTTGTCTCACCTATTTCCTCCCCTAAGTGGTCTTCCGTTACCGTTGATGCAGCGTCTCGGATCGTGCGC CGCAATTCTACCGCCCTTCGCGTCCTGATTCGCGCCCTTGTGGGTAGTATGAAATTTCCCGCTATCATTATCGAA CATGGACCCTCCCCTCCCATCAACTCCGGCCGCACAGCTCCTTTGCAAAAGAGCGAGAAAAAGCTGACGAGCCCG CATGATGTCATTGAAAAGGGCTATTCTCCCAAAGTCCTCAAACTCTGGGGGCTTTCCCTTGGCATGACTCTTGAC CTCATGTCCTACATGATTTTACCCGAATCCTCACGCGACATGATGCCGCCTAAAGAAGAAGGCAACAACTCGCCG CTATCACATTACATGCAGTTACCCTATCAGGATGTCGTGGAGGACTTTCGTGTGGAGTATGTGGCCCCCAGTCTT GCAAGCGTATTTCCAAAGTTTTCCTATCCCGACGTCAACTTTTGGATCTGGGTATTTGGTAAACGTTATCGAGAG GTTATCCGTGGCTGGGAGACAAGTTTACGTGGCGGAGGTGTAAATGACCGCCGAATAAATTGGTCAGGGTCTGCC CTGAGTACCTTTTACGCTGCCATCCGCAAGGCTTTAGTTGTCGTCATCGTTGCTCGTGCACTTGGTATCTTGTTT GGTATCGCCTTTGCAGGTTGGTGGATCTTTAGCCAGTAG
Gene	>AgabiH97\|010770 ATGTCTGCCGAAAAAGCGAATCCTCCGCCGCTCTCAGTCACGCCGCTCCTCGCCCGCGCCCTCCAGCGCATCCGC GCAACCCCGCCACGCATCATCGCATCTCCTCCTACCCGTGCGCTAACTTTTTCTTGTACTTTCTACCCCAGCTCA TCTCTGTCTTCCAGAACCTCGTCGGGCCGCGGTCGCTCTCATAGTTCGCGTCGTACCTTCACCAACCGCAAAACT CCCAGATCCTACATCCCCACCTCCCTCTCTTACCGAGTTCTTTGAAGAAGATTGGGTCAACGATCCGGGTTCTCG CGCAGAAATCCTTTTCCTACACCGTCAGGCAGACTTTGCAGACAATGTGGCATTGACACAAAGTCGTACGACCAA TGGGCGTGAGGCTCACGTTGCTTTTCCCGGTGGTAGAACTGAGCGAGACGACGAGGGCGGCTTGTACACGGGTAT GTTCGGCCGATTCTCGCTCTTATCTTGTTTCTTAAGCGTCCCACAGCAATGCGTCAAACATGGGAAGAAATTGGT ATCGACCTCGCTGAAAAAAACTACACATGCGTTGGCCAGCTGGACGACCGCGAAATCACTACCTCACTCGGGAAA CGGCTGCTTATGATCCTCTCCCCTTTTGTTTTTCTCCAAGTTACGCCCACAGCCTCTCCTCCCGATCCAATTGCT ACGACCTCTCTTCATTGGATACCGCTCGCTTCCCTTGTCTCACCTATTTCCTCCCCTAAGTGGTCTTCCGTTACC GTTGATGCAGCGTCTCGGATCGTGCGCCGCAATTCTACCGCCCTTCGCGTCCTGATTCGCGCCCTTGTGGGTAGT ATGAAATTTCCCGCTATCATTATCGAACATGGACCCTCCCCTCCCATCAACTCCGGCCGCACAGCTCCTTTGCAA AAGAGCGAGAAAAAGCTGACGAGCCCGCATGATGTCATTGAAAAGGGCTATTCTCCCAAAGTCCTCAAACTCTGG GGGCTTTCCCTTGGCATGACTCTTGACCTCATGTCCTACATGATTTTACCCGAATCCTCACGCGACATGATGCCG CCTAAAGAAGAAGGCAACAACTCGCCGCTATCACATTACATGCAGTTACCCTATCAGGATGTCGTGGAGGACTTT CGTGTGGAGTATGTGGCCCCCAGTCTTGCAAGCGTATTTCCAAAGTTTTCCTATCCCGACGTCAACTTTTGGATC TGGTAAGCATTTTCTTCATCGGGACATTTTTCTTTTCTCAACGCTATCTTTATTGTTATAGGGTATTTGGTAAAC GTTATCGAGAGGTTATCCGTGGCTGGGAGACAAGTTTACGTGGCGGAGGTGTAAATGACCGCCGGTGAGTGGATA CGGCTATCTCTAACCAATTTGAGTCGTGGAAGCTAAACGTCGTTTCTAGAATAAATTGGTCAGGGTCTGCCCTGA GTACCTTTTACGCTGCCATCCGCAAGGCTTTAGTTGTCGTCATCGTTGCTCGTGCACTTGGTATCTTGTTTGGTA TCGCCTTTGCAGGTTGGTGGATCTTTAGCCAGTAG

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