Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|010270
Gene name
Locationscaffold_1:2414890..2416602
Strand+
Gene length (bp)1712
Transcript length (bp)1386
Coding sequence length (bp)1386
Protein length (aa) 462

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

Domain # Start End Length
1 268 290 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|010270
MGSIPFRSSIIYFALFFQQVHGFTFITSQPTQCGELRFNWVGGTPPFTALVIAPFDIIRNISIPAQAWNERDQSG
DYSYLLNFNQSQKVVFSMGDATGPTTGGVTDVTTVGAPTQGSPPCTTSKHGPDFTFATTLPLSQCKNFSFGQLGS
AVQPISVLVTVPHGESFMLTAPLGDPFIWKANLTAGTNVIFTVKDAQNRLGGTSHILNVGTSDDSSCLGSPPISV
PPTRLPGVPTTSSLNPQHINTSSSSPTDSGSKNNHTDNKTGVIVGASVGGTVALLLTMALVYCLIRRKGGRNGIK
HIDLTGSTPGVSTSFMYHGHVAPTPYFVSSTGVVASQTTRNNGFPSASSTLTNIGTGPHVRNSSTAAAALAGTES
LAGTTDTEANHSVVSFKREVLQQRDGQLHLYFDPYAKNWWQQQDYDFEPYADATSHSQRIGSTSASGAGPASNPG
TTSRYSGATSP*
Coding >AgabiH97|010270
ATGGGCTCTATACCCTTTCGTTCATCCATTATTTATTTCGCTCTCTTTTTCCAGCAGGTCCATGGATTCACCTTC
ATTACCTCCCAGCCGACACAGTGTGGCGAACTGCGGTTCAATTGGGTCGGCGGTACACCGCCATTCACTGCTCTC
GTAATAGCGCCATTTGATATAATACGGAATATCAGTATCCCAGCGCAAGCGTGGAACGAACGAGACCAATCGGGA
GATTATTCGTATCTTCTCAATTTCAATCAAAGTCAGAAGGTCGTGTTTTCAATGGGTGATGCAACCGGACCCACC
ACAGGTGGAGTTACAGATGTTACCACTGTCGGAGCACCCACCCAAGGTTCGCCGCCGTGCACTACAAGCAAACAT
GGTCCCGATTTTACTTTCGCAACCACTTTACCACTTTCACAGTGCAAGAATTTTTCCTTCGGTCAGTTGGGTTCT
GCAGTGCAGCCAATATCAGTGCTTGTAACCGTACCTCACGGCGAATCCTTCATGTTGACCGCACCTCTCGGGGAT
CCTTTTATCTGGAAAGCTAACTTGACGGCGGGAACCAACGTTATCTTCACTGTGAAAGACGCTCAGAACCGCTTG
GGGGGTACGAGCCATATCCTCAACGTTGGCACATCGGATGATTCTTCGTGTTTGGGATCCCCTCCGATATCTGTC
CCACCTACTCGTTTGCCAGGAGTACCCACTACTTCATCACTCAACCCACAACATATAAATACGTCTTCCAGTAGC
CCAACTGATTCAGGAAGCAAGAATAACCACACAGATAACAAAACGGGGGTTATTGTCGGCGCCTCTGTCGGTGGA
ACTGTCGCACTTCTACTCACAATGGCACTCGTCTATTGTTTGATCAGACGGAAAGGTGGACGCAATGGCATCAAA
CACATTGACTTAACCGGATCAACTCCAGGCGTTTCTACATCTTTCATGTATCATGGTCATGTCGCACCCACTCCT
TACTTCGTCAGTTCAACGGGTGTAGTAGCATCACAGACGACCCGCAATAATGGTTTTCCTTCAGCTTCATCAACG
CTGACCAACATTGGGACCGGTCCCCATGTTAGAAATTCCTCTACAGCAGCGGCAGCCCTTGCGGGGACTGAGTCT
CTAGCTGGTACCACAGATACTGAGGCTAACCACTCTGTAGTGAGCTTCAAACGGGAGGTGTTGCAGCAACGGGAT
GGTCAGCTACACCTGTATTTTGATCCTTACGCAAAGAACTGGTGGCAGCAGCAGGACTATGATTTCGAACCGTAC
GCCGACGCAACATCTCATTCGCAGAGAATAGGAAGTACGTCAGCGTCTGGTGCTGGTCCGGCATCTAATCCTGGT
ACCACATCGAGATATAGTGGGGCCACATCGCCATAA
Transcript >AgabiH97|010270
ATGGGCTCTATACCCTTTCGTTCATCCATTATTTATTTCGCTCTCTTTTTCCAGCAGGTCCATGGATTCACCTTC
ATTACCTCCCAGCCGACACAGTGTGGCGAACTGCGGTTCAATTGGGTCGGCGGTACACCGCCATTCACTGCTCTC
GTAATAGCGCCATTTGATATAATACGGAATATCAGTATCCCAGCGCAAGCGTGGAACGAACGAGACCAATCGGGA
GATTATTCGTATCTTCTCAATTTCAATCAAAGTCAGAAGGTCGTGTTTTCAATGGGTGATGCAACCGGACCCACC
ACAGGTGGAGTTACAGATGTTACCACTGTCGGAGCACCCACCCAAGGTTCGCCGCCGTGCACTACAAGCAAACAT
GGTCCCGATTTTACTTTCGCAACCACTTTACCACTTTCACAGTGCAAGAATTTTTCCTTCGGTCAGTTGGGTTCT
GCAGTGCAGCCAATATCAGTGCTTGTAACCGTACCTCACGGCGAATCCTTCATGTTGACCGCACCTCTCGGGGAT
CCTTTTATCTGGAAAGCTAACTTGACGGCGGGAACCAACGTTATCTTCACTGTGAAAGACGCTCAGAACCGCTTG
GGGGGTACGAGCCATATCCTCAACGTTGGCACATCGGATGATTCTTCGTGTTTGGGATCCCCTCCGATATCTGTC
CCACCTACTCGTTTGCCAGGAGTACCCACTACTTCATCACTCAACCCACAACATATAAATACGTCTTCCAGTAGC
CCAACTGATTCAGGAAGCAAGAATAACCACACAGATAACAAAACGGGGGTTATTGTCGGCGCCTCTGTCGGTGGA
ACTGTCGCACTTCTACTCACAATGGCACTCGTCTATTGTTTGATCAGACGGAAAGGTGGACGCAATGGCATCAAA
CACATTGACTTAACCGGATCAACTCCAGGCGTTTCTACATCTTTCATGTATCATGGTCATGTCGCACCCACTCCT
TACTTCGTCAGTTCAACGGGTGTAGTAGCATCACAGACGACCCGCAATAATGGTTTTCCTTCAGCTTCATCAACG
CTGACCAACATTGGGACCGGTCCCCATGTTAGAAATTCCTCTACAGCAGCGGCAGCCCTTGCGGGGACTGAGTCT
CTAGCTGGTACCACAGATACTGAGGCTAACCACTCTGTAGTGAGCTTCAAACGGGAGGTGTTGCAGCAACGGGAT
GGTCAGCTACACCTGTATTTTGATCCTTACGCAAAGAACTGGTGGCAGCAGCAGGACTATGATTTCGAACCGTAC
GCCGACGCAACATCTCATTCGCAGAGAATAGGAAGTACGTCAGCGTCTGGTGCTGGTCCGGCATCTAATCCTGGT
ACCACATCGAGATATAGTGGGGCCACATCGCCATAA
Gene >AgabiH97|010270
ATGGGCTCTATACCCTTTCGTTCATCCATTATTTATTTCGCTCTCTTTTTCCAGCAGGTCCATGGATTCACCTTC
ATTACCTCCCAGCCGACACAGTGTGGCGAACTGCGGTTCAATTGGGTCGGTGAGTCATTAGAGCAGAAGACAGCG
CTGCTGTCTTTCTATGATTGACATCAAGAGTCAATCGGGGATTAACTCAGAAATTAATATGCATATTCATTGGCT
TCGCAGGCGGTACACCGCCATTCACTGCTCTCGTAATAGCGGTACGCTTCTTTCAAGTGGATATACTCGTAGACT
GATTGTTAATGCAGCCATTTGATATAATACGGAATATCAGTATCCCAGCGCAAGCGTGGAACGAACGAGACCAAT
CGGGAGATTATTCGTATCTTCTCAATTTCAATCAAAGTCAGAAGGTCGTGTTTTCAATGGGTGATGCAACCGGAC
CCACCACAGGTGGAGTTACAGATGTTACCACTGTCGGAGCACCCACCCAAGGTTCGCCGCCGTGCACTACAAGCA
AACATGGTAGGCTCAAATAATCATGGGGTATATATATTTTGCGAGTCGGGATTTTCGCAGGTCCCGATTTTACTT
TCGCAACCACTTTACCACTTTCACAGTGCAAGTGAGTTCTCCTCCACCTATCTCGCTACGTATTACGGTCTTATT
GGGCATACTTAGGAATTTTTCCTTCGGTCAGTTGGGTTCTGCAGTGCAGCCAATATCAGTGCTTGTTTGTCACAT
CGTACTTTCTTTTTCCGTGGCCGTAGACGCTCATGTTTTTTTTTCTACAGGTAACCGTACCTCACGGCGAATCCT
TCATGTTGACCGCACCTCTCGGGGATCCTTTTATCTGGAAAGCTAACTTGACGGCGGGAACCAACGTTATCTTCA
CTGTGAAAGACGCTCAGAACCGCTTGGGGGGTACGAGCCATATCCTCAACGTTGGCACATCGGATGATTCTTCGT
GTTTGGGATCCCCTCCGATATCTGTCCCACCTACTCGTTTGCCAGGAGTACCCACTACTTCATCACTCAACCCAC
AACATATAAATACGTCTTCCAGTAGCCCAACTGATTCAGGAAGCAAGAATAACCACACAGATAACAAAACGGGGG
TTATTGTCGGCGCCTCTGTCGGTGGAACTGTCGCACTTCTACTCACAATGGCACTCGTCTATTGTTTGATCAGAC
GGAAAGGTGGACGCAATGGCATCAAACACATTGACTTAACCGGATCAACTCCAGGCGTTTCTACATCTTTCATGT
ATCATGGTCATGTCGCACCCACTCCTTACTTCGTCAGTTCAACGGGTGTAGTAGCATCACAGACGACCCGCAATA
ATGGTTTTCCTTCAGCTTCATCAACGCTGACCAACATTGGGACCGGTCCCCATGTTAGAAATTCCTCTACAGCAG
CGGCAGCCCTTGCGGGGACTGAGTCTCTAGCTGGTACCACAGATACTGAGGCTAACCACTCTGTAGTGAGCTTCA
AACGGGAGGTGTTGCAGCAACGGGATGGTCAGCTACACCTGTATTTTGATCCTTACGCAAAGAACTGGTGGCAGC
AGCAGGACTATGATTTCGAACCGTACGCCGACGCAACATCTCATTCGCAGAGAATAGGAAGTACGTCAGCGTCTG
GTGCTGGTCCGGCATCTAATCCTGGTACCACATCGAGATATAGTGGGGCCACATCGCCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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