Fungal Genomics

General Properties

Protein ID	AgabiH97|010270
Gene name
Location	scaffold_1:2414890..2416602
Strand	+
Gene length (bp)	1712
Transcript length (bp)	1386
Coding sequence length (bp)	1386
Protein length (aa)	462

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Cell membrane|Lysosome/Vacuole	Signal peptide	0.0963	0.1045	0.3581	0.6543	0.1536	0.0043	0.0973	0.6222	0.1524	0.0579

SignalP

SignalP signal predicted	Location	Score
Yes	1 - 22	0.999625

Transmembrane Domains

Domain #	Start	End	Length
1	268	290	22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Orthologs

Orthofinder run ID	1
Orthogroup	920
Change Orthofinder run	1: Agaricomycetes 5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|010250
Agaricus bisporus var bisporus H39	AgabiH39|010260
Agaricus bisporus var bisporus H39	AgabiH39|010270
Agaricus bisporus var bisporus H97	AgabiH97|010250
Agaricus bisporus var bisporus H97	AgabiH97|010260
Agaricus bisporus var bisporus H97	AgabiH97|010270 (this protein)
Rhodonia placenta FPRL280	RhoplFPRL280|1_80

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97|010270 MGSIPFRSSIIYFALFFQQVHGFTFITSQPTQCGELRFNWVGGTPPFTALVIAPFDIIRNISIPAQAWNERDQSG DYSYLLNFNQSQKVVFSMGDATGPTTGGVTDVTTVGAPTQGSPPCTTSKHGPDFTFATTLPLSQCKNFSFGQLGS AVQPISVLVTVPHGESFMLTAPLGDPFIWKANLTAGTNVIFTVKDAQNRLGGTSHILNVGTSDDSSCLGSPPISV PPTRLPGVPTTSSLNPQHINTSSSSPTDSGSKNNHTDNKTGVIVGASVGGTVALLLTMALVYCLIRRKGGRNGIK HIDLTGSTPGVSTSFMYHGHVAPTPYFVSSTGVVASQTTRNNGFPSASSTLTNIGTGPHVRNSSTAAAALAGTES LAGTTDTEANHSVVSFKREVLQQRDGQLHLYFDPYAKNWWQQQDYDFEPYADATSHSQRIGSTSASGAGPASNPG TTSRYSGATSP*
Coding	>AgabiH97|010270 ATGGGCTCTATACCCTTTCGTTCATCCATTATTTATTTCGCTCTCTTTTTCCAGCAGGTCCATGGATTCACCTTC ATTACCTCCCAGCCGACACAGTGTGGCGAACTGCGGTTCAATTGGGTCGGCGGTACACCGCCATTCACTGCTCTC GTAATAGCGCCATTTGATATAATACGGAATATCAGTATCCCAGCGCAAGCGTGGAACGAACGAGACCAATCGGGA GATTATTCGTATCTTCTCAATTTCAATCAAAGTCAGAAGGTCGTGTTTTCAATGGGTGATGCAACCGGACCCACC ACAGGTGGAGTTACAGATGTTACCACTGTCGGAGCACCCACCCAAGGTTCGCCGCCGTGCACTACAAGCAAACAT GGTCCCGATTTTACTTTCGCAACCACTTTACCACTTTCACAGTGCAAGAATTTTTCCTTCGGTCAGTTGGGTTCT GCAGTGCAGCCAATATCAGTGCTTGTAACCGTACCTCACGGCGAATCCTTCATGTTGACCGCACCTCTCGGGGAT CCTTTTATCTGGAAAGCTAACTTGACGGCGGGAACCAACGTTATCTTCACTGTGAAAGACGCTCAGAACCGCTTG GGGGGTACGAGCCATATCCTCAACGTTGGCACATCGGATGATTCTTCGTGTTTGGGATCCCCTCCGATATCTGTC CCACCTACTCGTTTGCCAGGAGTACCCACTACTTCATCACTCAACCCACAACATATAAATACGTCTTCCAGTAGC CCAACTGATTCAGGAAGCAAGAATAACCACACAGATAACAAAACGGGGGTTATTGTCGGCGCCTCTGTCGGTGGA ACTGTCGCACTTCTACTCACAATGGCACTCGTCTATTGTTTGATCAGACGGAAAGGTGGACGCAATGGCATCAAA CACATTGACTTAACCGGATCAACTCCAGGCGTTTCTACATCTTTCATGTATCATGGTCATGTCGCACCCACTCCT TACTTCGTCAGTTCAACGGGTGTAGTAGCATCACAGACGACCCGCAATAATGGTTTTCCTTCAGCTTCATCAACG CTGACCAACATTGGGACCGGTCCCCATGTTAGAAATTCCTCTACAGCAGCGGCAGCCCTTGCGGGGACTGAGTCT CTAGCTGGTACCACAGATACTGAGGCTAACCACTCTGTAGTGAGCTTCAAACGGGAGGTGTTGCAGCAACGGGAT GGTCAGCTACACCTGTATTTTGATCCTTACGCAAAGAACTGGTGGCAGCAGCAGGACTATGATTTCGAACCGTAC GCCGACGCAACATCTCATTCGCAGAGAATAGGAAGTACGTCAGCGTCTGGTGCTGGTCCGGCATCTAATCCTGGT ACCACATCGAGATATAGTGGGGCCACATCGCCATAA
Transcript	>AgabiH97|010270 ATGGGCTCTATACCCTTTCGTTCATCCATTATTTATTTCGCTCTCTTTTTCCAGCAGGTCCATGGATTCACCTTC ATTACCTCCCAGCCGACACAGTGTGGCGAACTGCGGTTCAATTGGGTCGGCGGTACACCGCCATTCACTGCTCTC GTAATAGCGCCATTTGATATAATACGGAATATCAGTATCCCAGCGCAAGCGTGGAACGAACGAGACCAATCGGGA GATTATTCGTATCTTCTCAATTTCAATCAAAGTCAGAAGGTCGTGTTTTCAATGGGTGATGCAACCGGACCCACC ACAGGTGGAGTTACAGATGTTACCACTGTCGGAGCACCCACCCAAGGTTCGCCGCCGTGCACTACAAGCAAACAT GGTCCCGATTTTACTTTCGCAACCACTTTACCACTTTCACAGTGCAAGAATTTTTCCTTCGGTCAGTTGGGTTCT GCAGTGCAGCCAATATCAGTGCTTGTAACCGTACCTCACGGCGAATCCTTCATGTTGACCGCACCTCTCGGGGAT CCTTTTATCTGGAAAGCTAACTTGACGGCGGGAACCAACGTTATCTTCACTGTGAAAGACGCTCAGAACCGCTTG GGGGGTACGAGCCATATCCTCAACGTTGGCACATCGGATGATTCTTCGTGTTTGGGATCCCCTCCGATATCTGTC CCACCTACTCGTTTGCCAGGAGTACCCACTACTTCATCACTCAACCCACAACATATAAATACGTCTTCCAGTAGC CCAACTGATTCAGGAAGCAAGAATAACCACACAGATAACAAAACGGGGGTTATTGTCGGCGCCTCTGTCGGTGGA ACTGTCGCACTTCTACTCACAATGGCACTCGTCTATTGTTTGATCAGACGGAAAGGTGGACGCAATGGCATCAAA CACATTGACTTAACCGGATCAACTCCAGGCGTTTCTACATCTTTCATGTATCATGGTCATGTCGCACCCACTCCT TACTTCGTCAGTTCAACGGGTGTAGTAGCATCACAGACGACCCGCAATAATGGTTTTCCTTCAGCTTCATCAACG CTGACCAACATTGGGACCGGTCCCCATGTTAGAAATTCCTCTACAGCAGCGGCAGCCCTTGCGGGGACTGAGTCT CTAGCTGGTACCACAGATACTGAGGCTAACCACTCTGTAGTGAGCTTCAAACGGGAGGTGTTGCAGCAACGGGAT GGTCAGCTACACCTGTATTTTGATCCTTACGCAAAGAACTGGTGGCAGCAGCAGGACTATGATTTCGAACCGTAC GCCGACGCAACATCTCATTCGCAGAGAATAGGAAGTACGTCAGCGTCTGGTGCTGGTCCGGCATCTAATCCTGGT ACCACATCGAGATATAGTGGGGCCACATCGCCATAA
Gene	>AgabiH97|010270 ATGGGCTCTATACCCTTTCGTTCATCCATTATTTATTTCGCTCTCTTTTTCCAGCAGGTCCATGGATTCACCTTC ATTACCTCCCAGCCGACACAGTGTGGCGAACTGCGGTTCAATTGGGTCGGTGAGTCATTAGAGCAGAAGACAGCG CTGCTGTCTTTCTATGATTGACATCAAGAGTCAATCGGGGATTAACTCAGAAATTAATATGCATATTCATTGGCT TCGCAGGCGGTACACCGCCATTCACTGCTCTCGTAATAGCGGTACGCTTCTTTCAAGTGGATATACTCGTAGACT GATTGTTAATGCAGCCATTTGATATAATACGGAATATCAGTATCCCAGCGCAAGCGTGGAACGAACGAGACCAAT CGGGAGATTATTCGTATCTTCTCAATTTCAATCAAAGTCAGAAGGTCGTGTTTTCAATGGGTGATGCAACCGGAC CCACCACAGGTGGAGTTACAGATGTTACCACTGTCGGAGCACCCACCCAAGGTTCGCCGCCGTGCACTACAAGCA AACATGGTAGGCTCAAATAATCATGGGGTATATATATTTTGCGAGTCGGGATTTTCGCAGGTCCCGATTTTACTT TCGCAACCACTTTACCACTTTCACAGTGCAAGTGAGTTCTCCTCCACCTATCTCGCTACGTATTACGGTCTTATT GGGCATACTTAGGAATTTTTCCTTCGGTCAGTTGGGTTCTGCAGTGCAGCCAATATCAGTGCTTGTTTGTCACAT CGTACTTTCTTTTTCCGTGGCCGTAGACGCTCATGTTTTTTTTTCTACAGGTAACCGTACCTCACGGCGAATCCT TCATGTTGACCGCACCTCTCGGGGATCCTTTTATCTGGAAAGCTAACTTGACGGCGGGAACCAACGTTATCTTCA CTGTGAAAGACGCTCAGAACCGCTTGGGGGGTACGAGCCATATCCTCAACGTTGGCACATCGGATGATTCTTCGT GTTTGGGATCCCCTCCGATATCTGTCCCACCTACTCGTTTGCCAGGAGTACCCACTACTTCATCACTCAACCCAC AACATATAAATACGTCTTCCAGTAGCCCAACTGATTCAGGAAGCAAGAATAACCACACAGATAACAAAACGGGGG TTATTGTCGGCGCCTCTGTCGGTGGAACTGTCGCACTTCTACTCACAATGGCACTCGTCTATTGTTTGATCAGAC GGAAAGGTGGACGCAATGGCATCAAACACATTGACTTAACCGGATCAACTCCAGGCGTTTCTACATCTTTCATGT ATCATGGTCATGTCGCACCCACTCCTTACTTCGTCAGTTCAACGGGTGTAGTAGCATCACAGACGACCCGCAATA ATGGTTTTCCTTCAGCTTCATCAACGCTGACCAACATTGGGACCGGTCCCCATGTTAGAAATTCCTCTACAGCAG CGGCAGCCCTTGCGGGGACTGAGTCTCTAGCTGGTACCACAGATACTGAGGCTAACCACTCTGTAGTGAGCTTCA AACGGGAGGTGTTGCAGCAACGGGATGGTCAGCTACACCTGTATTTTGATCCTTACGCAAAGAACTGGTGGCAGC AGCAGGACTATGATTTCGAACCGTACGCCGACGCAACATCTCATTCGCAGAGAATAGGAAGTACGTCAGCGTCTG GTGCTGGTCCGGCATCTAATCCTGGTACCACATCGAGATATAGTGGGGCCACATCGCCATAA