Protein ID | AgabiH97|010260 |
Gene name | |
Location | scaffold_1:2412397..2414102 |
Strand | + |
Gene length (bp) | 1705 |
Transcript length (bp) | 1398 |
Coding sequence length (bp) | 1398 |
Protein length (aa) | 466 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 23 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 254 | 276 | 22 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Casing | Casing mycelium | 35.28 | 20.44 | 50.13 |
Initials | Initials knots | 29.22 | 16.65 | 41.80 |
Pileal_Stipeal_center | Stage I stipe center | 25.01 | 13.99 | 36.03 |
Pileal_Stipeal_shell | Stage I stipe shell | 22.95 | 12.72 | 33.18 |
DIF_stipe_center | Stage II stipe center | 21.45 | 11.79 | 31.12 |
DIF_stipe_shell | Stage II stipe shell | 22.64 | 12.51 | 32.76 |
DIF_stipe_skin | Stage II stipe skin | 24.57 | 13.72 | 35.42 |
DIF_cap_skin | Stage II cap skin | 21.40 | 11.74 | 31.07 |
DIF_cap_tissue | Stage II cap tissue | 19.70 | 10.68 | 28.73 |
DIF_gill_tissue | Stage II gill tissue | 23.78 | 13.17 | 34.38 |
YFB_stipe_center | Young fruiting body stipe center | 19.19 | 10.40 | 27.97 |
YFB_stipe_shell | Young fruiting body stipe shell | 20.39 | 11.05 | 29.73 |
YFB_stipe_skin | Young fruiting body stipe skin | 21.51 | 11.82 | 31.19 |
YFB_cap_skin | Young fruiting body cap skin | 17.77 | 9.51 | 26.03 |
YFB_cap_tissue | Young fruiting body cap tissue | 18.49 | 9.98 | 27.01 |
YFB_gill_tissue | Young fruiting body gill tissue | 21.64 | 11.89 | 31.39 |
YFB_veil | Young fruiting body veil | 22.18 | 12.25 | 32.10 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Casing | DIF_gill_tissue | 0.210195 | no |
Casing | YFB_stipe_center | 0.033211 | yes |
Casing | YFB_stipe_shell | 0.068640 | no |
Casing | YFB_stipe_skin | 0.102187 | no |
Casing | YFB_cap_skin | 0.014081 | yes |
Casing | YFB_cap_tissue | 0.023415 | yes |
Casing | YFB_gill_tissue | 0.101059 | no |
Casing | YFB_veil | 0.125429 | no |
Casing | Initials | 0.641975 | no |
Casing | Pileal_Stipeal_center | 0.289380 | no |
Casing | Pileal_Stipeal_shell | 0.162633 | no |
Casing | DIF_stipe_center | 0.095314 | no |
Casing | DIF_stipe_shell | 0.146063 | no |
Casing | DIF_stipe_skin | 0.260392 | no |
Casing | DIF_cap_skin | 0.091664 | no |
Casing | DIF_cap_tissue | 0.047798 | yes |
DIF_gill_tissue | YFB_stipe_center | 0.620391 | no |
DIF_gill_tissue | YFB_stipe_shell | 0.751468 | no |
DIF_gill_tissue | YFB_stipe_skin | 0.852673 | no |
DIF_gill_tissue | YFB_cap_skin | 0.438285 | no |
DIF_gill_tissue | YFB_cap_tissue | 0.534082 | no |
DIF_gill_tissue | YFB_gill_tissue | 0.860321 | no |
DIF_gill_tissue | YFB_veil | 0.900614 | no |
YFB_stipe_center | YFB_stipe_shell | 0.920036 | no |
YFB_stipe_center | YFB_stipe_skin | 0.830315 | no |
YFB_stipe_center | YFB_cap_skin | 0.894002 | no |
YFB_stipe_center | YFB_cap_tissue | 0.954207 | no |
YFB_stipe_center | YFB_gill_tissue | 0.813591 | no |
YFB_stipe_center | YFB_veil | 0.765824 | no |
YFB_stipe_shell | YFB_stipe_skin | 0.930026 | no |
YFB_stipe_shell | YFB_cap_skin | 0.785046 | no |
YFB_stipe_shell | YFB_cap_tissue | 0.862933 | no |
YFB_stipe_shell | YFB_gill_tissue | 0.918698 | no |
YFB_stipe_shell | YFB_veil | 0.878462 | no |
YFB_stipe_skin | YFB_cap_skin | 0.663812 | no |
YFB_stipe_skin | YFB_cap_tissue | 0.754255 | no |
YFB_stipe_skin | YFB_gill_tissue | 0.991714 | no |
YFB_stipe_skin | YFB_veil | 0.960101 | no |
YFB_cap_skin | YFB_cap_tissue | 0.948419 | no |
YFB_cap_skin | YFB_gill_tissue | 0.655582 | no |
YFB_cap_skin | YFB_veil | 0.599375 | no |
YFB_cap_tissue | YFB_gill_tissue | 0.738344 | no |
YFB_cap_tissue | YFB_veil | 0.684739 | no |
YFB_gill_tissue | YFB_veil | 0.967364 | no |
Initials | DIF_gill_tissue | 0.615446 | no |
Initials | YFB_stipe_center | 0.196632 | no |
Initials | YFB_stipe_shell | 0.302886 | no |
Initials | YFB_stipe_skin | 0.399362 | no |
Initials | YFB_cap_skin | 0.109622 | no |
Initials | YFB_cap_tissue | 0.146995 | no |
Initials | YFB_gill_tissue | 0.402444 | no |
Initials | YFB_veil | 0.456598 | no |
Initials | Pileal_Stipeal_center | 0.727807 | no |
Initials | Pileal_Stipeal_shell | 0.539132 | no |
Initials | DIF_stipe_center | 0.389862 | no |
Initials | DIF_stipe_shell | 0.503953 | no |
Initials | DIF_stipe_skin | 0.684340 | no |
Initials | DIF_cap_skin | 0.378318 | no |
Initials | DIF_cap_tissue | 0.230656 | no |
Pileal_Stipeal_center | DIF_gill_tissue | 0.930000 | no |
Pileal_Stipeal_center | YFB_stipe_center | 0.493038 | no |
Pileal_Stipeal_center | YFB_stipe_shell | 0.633782 | no |
Pileal_Stipeal_center | YFB_stipe_skin | 0.749646 | no |
Pileal_Stipeal_center | YFB_cap_skin | 0.326941 | no |
Pileal_Stipeal_center | YFB_cap_tissue | 0.410165 | no |
Pileal_Stipeal_center | YFB_gill_tissue | 0.758505 | no |
Pileal_Stipeal_center | YFB_veil | 0.805911 | no |
Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.872465 | no |
Pileal_Stipeal_center | DIF_stipe_center | 0.741163 | no |
Pileal_Stipeal_center | DIF_stipe_shell | 0.847394 | no |
Pileal_Stipeal_center | DIF_stipe_skin | 0.975985 | no |
Pileal_Stipeal_center | DIF_cap_skin | 0.734986 | no |
Pileal_Stipeal_center | DIF_cap_tissue | 0.557090 | no |
Pileal_Stipeal_shell | DIF_gill_tissue | 0.951852 | no |
Pileal_Stipeal_shell | YFB_stipe_center | 0.694381 | no |
Pileal_Stipeal_shell | YFB_stipe_shell | 0.818139 | no |
Pileal_Stipeal_shell | YFB_stipe_skin | 0.907787 | no |
Pileal_Stipeal_shell | YFB_cap_skin | 0.520190 | no |
Pileal_Stipeal_shell | YFB_cap_tissue | 0.614692 | no |
Pileal_Stipeal_shell | YFB_gill_tissue | 0.915232 | no |
Pileal_Stipeal_shell | YFB_veil | 0.953410 | no |
Pileal_Stipeal_shell | DIF_stipe_center | 0.904295 | no |
Pileal_Stipeal_shell | DIF_stipe_shell | 0.980988 | no |
Pileal_Stipeal_shell | DIF_stipe_skin | 0.898925 | no |
Pileal_Stipeal_shell | DIF_cap_skin | 0.898778 | no |
Pileal_Stipeal_shell | DIF_cap_tissue | 0.751198 | no |
DIF_stipe_center | DIF_gill_tissue | 0.845475 | no |
DIF_stipe_center | YFB_stipe_center | 0.831574 | no |
DIF_stipe_center | YFB_stipe_shell | 0.932959 | no |
DIF_stipe_center | YFB_stipe_skin | 0.996056 | no |
DIF_stipe_center | YFB_cap_skin | 0.669285 | no |
DIF_stipe_center | YFB_cap_tissue | 0.761735 | no |
DIF_stipe_center | YFB_gill_tissue | 0.988112 | no |
DIF_stipe_center | YFB_veil | 0.956969 | no |
DIF_stipe_center | DIF_stipe_shell | 0.926914 | no |
DIF_stipe_center | DIF_stipe_skin | 0.775666 | no |
DIF_stipe_center | DIF_cap_skin | 0.996433 | no |
DIF_stipe_center | DIF_cap_tissue | 0.880810 | no |
DIF_stipe_shell | DIF_gill_tissue | 0.932700 | no |
DIF_stipe_shell | YFB_stipe_center | 0.724478 | no |
DIF_stipe_shell | YFB_stipe_shell | 0.845079 | no |
DIF_stipe_shell | YFB_stipe_skin | 0.930230 | no |
DIF_stipe_shell | YFB_cap_skin | 0.551745 | no |
DIF_stipe_shell | YFB_cap_tissue | 0.648446 | no |
DIF_stipe_shell | YFB_gill_tissue | 0.937352 | no |
DIF_stipe_shell | YFB_veil | 0.973480 | no |
DIF_stipe_shell | DIF_stipe_skin | 0.876641 | no |
DIF_stipe_shell | DIF_cap_skin | 0.922461 | no |
DIF_stipe_shell | DIF_cap_tissue | 0.778800 | no |
DIF_stipe_skin | DIF_gill_tissue | 0.957023 | no |
DIF_stipe_skin | YFB_stipe_center | 0.535600 | no |
DIF_stipe_skin | YFB_stipe_shell | 0.674728 | no |
DIF_stipe_skin | YFB_stipe_skin | 0.785200 | no |
DIF_stipe_skin | YFB_cap_skin | 0.362895 | no |
DIF_stipe_skin | YFB_cap_tissue | 0.454694 | no |
DIF_stipe_skin | YFB_gill_tissue | 0.792880 | no |
DIF_stipe_skin | YFB_veil | 0.841123 | no |
DIF_stipe_skin | DIF_cap_skin | 0.772359 | no |
DIF_stipe_skin | DIF_cap_tissue | 0.597930 | no |
DIF_cap_skin | DIF_gill_tissue | 0.839383 | no |
DIF_cap_skin | YFB_stipe_center | 0.833930 | no |
DIF_cap_skin | YFB_stipe_shell | 0.935124 | no |
DIF_cap_skin | YFB_stipe_skin | 0.993176 | no |
DIF_cap_skin | YFB_cap_skin | 0.676426 | no |
DIF_cap_skin | YFB_cap_tissue | 0.766526 | no |
DIF_cap_skin | YFB_gill_tissue | 0.984999 | no |
DIF_cap_skin | YFB_veil | 0.952649 | no |
DIF_cap_skin | DIF_cap_tissue | 0.882669 | no |
DIF_cap_tissue | DIF_gill_tissue | 0.675495 | no |
DIF_cap_tissue | YFB_stipe_center | 0.965311 | no |
DIF_cap_tissue | YFB_stipe_shell | 0.956076 | no |
DIF_cap_tissue | YFB_stipe_skin | 0.875444 | no |
DIF_cap_tissue | YFB_cap_skin | 0.850122 | no |
DIF_cap_tissue | YFB_cap_tissue | 0.916767 | no |
DIF_cap_tissue | YFB_gill_tissue | 0.863074 | no |
DIF_cap_tissue | YFB_veil | 0.816426 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >AgabiH97|010260 MCCLDFLLCFFTLAACFHRIYGFPFETSHPTQCGTQIFTWVDGTPPFNALIFVSDGTMRNLSIPADAYDSERAEG RFSFPLNFNRSQSIMFAMGDATGVTSGGITDVFTVGSASESSPSCNTTDPGVDFFFSTNSKLIQCKDFEFSLFPN AVQPITILVTVANGESFYLRPPPGDPFVWKANLTSGSSVLFTMTDSRNRVGGTSELNIVGDSDDSSCLRQLSPSA APTRTPPAPTSTSTPTQTQSDGKRNNIGLIVGASIAGVVAIAIIAVLIYFISKRSSRKGPKAIDLTGGEPDSSTG LLSFGQQQTRNPAMNPFSSSHDSTITPYSIGSPAGASMMGSNSMGNLSAAAGIGAASGVGAVAAQGRQARMIAKH EAIQQDTYQTYLDPYNSPYEQSQSAASSSSAYQTTFNSPSGPSSTSTRKSTMESSAQLTPRRFIVHTDIEDEPIE LPPMYSERTHGSQRS* |
Coding | >AgabiH97|010260 ATGTGTTGTCTAGACTTTCTTTTATGTTTTTTTACGCTTGCTGCGTGTTTCCACCGTATCTATGGCTTTCCTTTC GAGACTTCTCATCCGACCCAGTGTGGCACACAGATTTTTACTTGGGTTGATGGCACACCACCGTTTAATGCCCTC ATATTTGTGTCGGACGGTACTATGCGAAATCTCAGTATTCCAGCGGATGCATACGACTCAGAACGTGCGGAGGGA AGATTTTCATTTCCTCTGAACTTTAATCGAAGCCAGTCGATTATGTTTGCAATGGGAGATGCAACCGGGGTGACT TCTGGCGGCATAACGGACGTCTTTACTGTCGGCTCGGCGTCTGAGAGTTCACCAAGTTGTAATACGACTGATCCT GGCGTAGATTTCTTTTTTTCAACCAATTCTAAGCTCATACAATGCAAAGACTTCGAGTTTTCGCTCTTTCCCAAT GCAGTGCAACCTATAACAATTCTTGTGACAGTAGCCAATGGAGAATCTTTCTACCTTCGTCCACCTCCGGGCGAT CCATTTGTTTGGAAAGCCAACCTAACGTCAGGATCATCTGTCCTGTTCACGATGACAGACTCAAGAAATCGCGTG GGCGGAACATCAGAGCTGAATATTGTAGGGGATTCAGATGATTCATCATGCCTCCGTCAACTTTCTCCGTCGGCT GCACCAACTCGTACTCCACCGGCACCTACTTCAACATCCACTCCTACTCAGACACAGAGCGATGGAAAGAGGAAC AACATAGGGTTAATCGTCGGCGCATCTATCGCTGGAGTTGTTGCAATTGCCATTATAGCCGTGCTTATTTACTTC ATCTCTAAACGGAGTAGTAGAAAGGGACCCAAGGCTATCGATCTGACGGGAGGAGAGCCCGATTCTTCCACTGGT CTGTTGTCCTTTGGCCAGCAACAGACTCGAAACCCTGCAATGAATCCATTCTCGTCATCCCATGATTCTACAATA ACGCCATACAGTATCGGTTCACCTGCTGGGGCTTCGATGATGGGTAGTAACAGTATGGGAAACCTTTCAGCCGCC GCGGGTATCGGGGCAGCTTCGGGAGTTGGAGCCGTGGCCGCTCAGGGCCGTCAAGCGAGAATGATCGCCAAACAT GAAGCTATACAGCAGGATACATACCAAACATATCTTGATCCTTACAACTCTCCTTACGAACAAAGCCAGTCCGCC GCATCTTCCAGTTCTGCCTACCAGACAACGTTCAACTCTCCTTCCGGACCCTCATCCACGTCGACCCGGAAGTCA ACAATGGAGTCGTCCGCACAACTTACTCCACGGCGTTTCATCGTGCATACCGACATCGAAGATGAACCGATAGAA TTGCCTCCAATGTATTCAGAACGGACGCATGGTTCTCAACGCTCATAA |
Transcript | >AgabiH97|010260 ATGTGTTGTCTAGACTTTCTTTTATGTTTTTTTACGCTTGCTGCGTGTTTCCACCGTATCTATGGCTTTCCTTTC GAGACTTCTCATCCGACCCAGTGTGGCACACAGATTTTTACTTGGGTTGATGGCACACCACCGTTTAATGCCCTC ATATTTGTGTCGGACGGTACTATGCGAAATCTCAGTATTCCAGCGGATGCATACGACTCAGAACGTGCGGAGGGA AGATTTTCATTTCCTCTGAACTTTAATCGAAGCCAGTCGATTATGTTTGCAATGGGAGATGCAACCGGGGTGACT TCTGGCGGCATAACGGACGTCTTTACTGTCGGCTCGGCGTCTGAGAGTTCACCAAGTTGTAATACGACTGATCCT GGCGTAGATTTCTTTTTTTCAACCAATTCTAAGCTCATACAATGCAAAGACTTCGAGTTTTCGCTCTTTCCCAAT GCAGTGCAACCTATAACAATTCTTGTGACAGTAGCCAATGGAGAATCTTTCTACCTTCGTCCACCTCCGGGCGAT CCATTTGTTTGGAAAGCCAACCTAACGTCAGGATCATCTGTCCTGTTCACGATGACAGACTCAAGAAATCGCGTG GGCGGAACATCAGAGCTGAATATTGTAGGGGATTCAGATGATTCATCATGCCTCCGTCAACTTTCTCCGTCGGCT GCACCAACTCGTACTCCACCGGCACCTACTTCAACATCCACTCCTACTCAGACACAGAGCGATGGAAAGAGGAAC AACATAGGGTTAATCGTCGGCGCATCTATCGCTGGAGTTGTTGCAATTGCCATTATAGCCGTGCTTATTTACTTC ATCTCTAAACGGAGTAGTAGAAAGGGACCCAAGGCTATCGATCTGACGGGAGGAGAGCCCGATTCTTCCACTGGT CTGTTGTCCTTTGGCCAGCAACAGACTCGAAACCCTGCAATGAATCCATTCTCGTCATCCCATGATTCTACAATA ACGCCATACAGTATCGGTTCACCTGCTGGGGCTTCGATGATGGGTAGTAACAGTATGGGAAACCTTTCAGCCGCC GCGGGTATCGGGGCAGCTTCGGGAGTTGGAGCCGTGGCCGCTCAGGGCCGTCAAGCGAGAATGATCGCCAAACAT GAAGCTATACAGCAGGATACATACCAAACATATCTTGATCCTTACAACTCTCCTTACGAACAAAGCCAGTCCGCC GCATCTTCCAGTTCTGCCTACCAGACAACGTTCAACTCTCCTTCCGGACCCTCATCCACGTCGACCCGGAAGTCA ACAATGGAGTCGTCCGCACAACTTACTCCACGGCGTTTCATCGTGCATACCGACATCGAAGATGAACCGATAGAA TTGCCTCCAATGTATTCAGAACGGACGCATGGTTCTCAACGCTCATAA |
Gene | >AgabiH97|010260 ATGTGTTGTCTAGACTTTCTTTTATGTTTTTTTACGCTTGCTGCGTGTTTCCACCGTATCTATGGCTTTCCTTTC GAGACTTCTCATCCGACCCAGTGTGGCACACAGATTTTTACTTGGGTTGGTAAGTGCCACCTTGTTACTGATATA ATCTTGCTTTTCTACAATCTAGATTCTAATGTAAACAAACCATTTTGCAGATGGCACACCACCGTTTAATGCCCT CATATTTGTGGTGTGTGTTCTTCGCCTTATTTCTATAAACCACACACGGTTGACCAGCGCGCGCGTTGTCATGTC GTAGTCGGACGGTACTATGCGAAATCTCAGTATTCCAGCGGATGCATACGACTCAGAACGTGCGGAGGGAAGATT TTCATTTCCTCTGAACTTTAATCGAAGCCAGTCGATTATGTTTGCAATGGGAGATGCAACCGGGGTGACTTCTGG CGGCATAACGGACGTCTTTACTGTCGGCTCGGCGTCTGAGAGTTCACCAAGTTGTAATACGACTGATCCTGGTGG GTTAGGAAAAGAGGTTGTGAATTGTATATTGACGATATTCCACAGGCGTAGATTTCTTTTTTTCAACCAATTCTA AGCTCATACAATGCAAGTGAGTTTCGGCCGATCTACCTCCAATCCCTCAAGGGTGTTCTAACAACCAATCCATCC AGAGACTTCGAGTTTTCGCTCTTTCCCAATGCAGTGCAACCTATAACAATTCTTGTACGTGACTACTGTATAACT CTTTACCTTACTGACAATTTCTTTCTTGTAGGTGACAGTAGCCAATGGAGAATCTTTCTACCTTCGTCCACCTCC GGGCGATCCATTTGTTTGGAAAGCCAACCTAACGTCAGGATCATCTGTCCTGTTCACGATGACAGACTCAAGAAA TCGCGTGGGCGGAACATCAGAGCTGAATATTGTAGGGGATTCAGATGATTCATCATGCCTCCGTCAACTTTCTCC GTCGGCTGCACCAACTCGTACTCCACCGGCACCTACTTCAACATCCACTCCTACTCAGACACAGAGCGATGGAAA GAGGAACAACATAGGGTTAATCGTCGGCGCATCTATCGCTGGAGTTGTTGCAATTGCCATTATAGCCGTGCTTAT TTACTTCATCTCTAAACGGAGTAGTAGAAAGGGACCCAAGGCTATCGATCTGACGGGAGGAGAGCCCGATTCTTC CACTGGTCTGTTGTCCTTTGGCCAGCAACAGACTCGAAACCCTGCAATGAATCCATTCTCGTCATCCCATGATTC TACAATAACGCCATACAGTATCGGTTCACCTGCTGGGGCTTCGATGATGGGTAGTAACAGTATGGGAAACCTTTC AGCCGCCGCGGGTATCGGGGCAGCTTCGGGAGTTGGAGCCGTGGCCGCTCAGGGCCGTCAAGCGAGAATGATCGC CAAACATGAAGCTATACAGCAGGATACATACCAAACATATCTTGATCCTTACAACTCTCCTTACGAACAAAGCCA GTCCGCCGCATCTTCCAGTTCTGCCTACCAGACAACGTTCAACTCTCCTTCCGGACCCTCATCCACGTCGACCCG GAAGTCAACAATGGAGTCGTCCGCACAACTTACTCCACGGCGTTTCATCGTGCATACCGACATCGAAGATGAACC GATAGAATTGCCTCCAATGTATTCAGAACGGACGCATGGTTCTCAACGCTCATAA |