Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|010260
Gene name
Locationscaffold_1:2412397..2414102
Strand+
Gene length (bp)1705
Transcript length (bp)1398
Coding sequence length (bp)1398
Protein length (aa) 466

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

Domain # Start End Length
1 254 276 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|010260
MCCLDFLLCFFTLAACFHRIYGFPFETSHPTQCGTQIFTWVDGTPPFNALIFVSDGTMRNLSIPADAYDSERAEG
RFSFPLNFNRSQSIMFAMGDATGVTSGGITDVFTVGSASESSPSCNTTDPGVDFFFSTNSKLIQCKDFEFSLFPN
AVQPITILVTVANGESFYLRPPPGDPFVWKANLTSGSSVLFTMTDSRNRVGGTSELNIVGDSDDSSCLRQLSPSA
APTRTPPAPTSTSTPTQTQSDGKRNNIGLIVGASIAGVVAIAIIAVLIYFISKRSSRKGPKAIDLTGGEPDSSTG
LLSFGQQQTRNPAMNPFSSSHDSTITPYSIGSPAGASMMGSNSMGNLSAAAGIGAASGVGAVAAQGRQARMIAKH
EAIQQDTYQTYLDPYNSPYEQSQSAASSSSAYQTTFNSPSGPSSTSTRKSTMESSAQLTPRRFIVHTDIEDEPIE
LPPMYSERTHGSQRS*
Coding >AgabiH97|010260
ATGTGTTGTCTAGACTTTCTTTTATGTTTTTTTACGCTTGCTGCGTGTTTCCACCGTATCTATGGCTTTCCTTTC
GAGACTTCTCATCCGACCCAGTGTGGCACACAGATTTTTACTTGGGTTGATGGCACACCACCGTTTAATGCCCTC
ATATTTGTGTCGGACGGTACTATGCGAAATCTCAGTATTCCAGCGGATGCATACGACTCAGAACGTGCGGAGGGA
AGATTTTCATTTCCTCTGAACTTTAATCGAAGCCAGTCGATTATGTTTGCAATGGGAGATGCAACCGGGGTGACT
TCTGGCGGCATAACGGACGTCTTTACTGTCGGCTCGGCGTCTGAGAGTTCACCAAGTTGTAATACGACTGATCCT
GGCGTAGATTTCTTTTTTTCAACCAATTCTAAGCTCATACAATGCAAAGACTTCGAGTTTTCGCTCTTTCCCAAT
GCAGTGCAACCTATAACAATTCTTGTGACAGTAGCCAATGGAGAATCTTTCTACCTTCGTCCACCTCCGGGCGAT
CCATTTGTTTGGAAAGCCAACCTAACGTCAGGATCATCTGTCCTGTTCACGATGACAGACTCAAGAAATCGCGTG
GGCGGAACATCAGAGCTGAATATTGTAGGGGATTCAGATGATTCATCATGCCTCCGTCAACTTTCTCCGTCGGCT
GCACCAACTCGTACTCCACCGGCACCTACTTCAACATCCACTCCTACTCAGACACAGAGCGATGGAAAGAGGAAC
AACATAGGGTTAATCGTCGGCGCATCTATCGCTGGAGTTGTTGCAATTGCCATTATAGCCGTGCTTATTTACTTC
ATCTCTAAACGGAGTAGTAGAAAGGGACCCAAGGCTATCGATCTGACGGGAGGAGAGCCCGATTCTTCCACTGGT
CTGTTGTCCTTTGGCCAGCAACAGACTCGAAACCCTGCAATGAATCCATTCTCGTCATCCCATGATTCTACAATA
ACGCCATACAGTATCGGTTCACCTGCTGGGGCTTCGATGATGGGTAGTAACAGTATGGGAAACCTTTCAGCCGCC
GCGGGTATCGGGGCAGCTTCGGGAGTTGGAGCCGTGGCCGCTCAGGGCCGTCAAGCGAGAATGATCGCCAAACAT
GAAGCTATACAGCAGGATACATACCAAACATATCTTGATCCTTACAACTCTCCTTACGAACAAAGCCAGTCCGCC
GCATCTTCCAGTTCTGCCTACCAGACAACGTTCAACTCTCCTTCCGGACCCTCATCCACGTCGACCCGGAAGTCA
ACAATGGAGTCGTCCGCACAACTTACTCCACGGCGTTTCATCGTGCATACCGACATCGAAGATGAACCGATAGAA
TTGCCTCCAATGTATTCAGAACGGACGCATGGTTCTCAACGCTCATAA
Transcript >AgabiH97|010260
ATGTGTTGTCTAGACTTTCTTTTATGTTTTTTTACGCTTGCTGCGTGTTTCCACCGTATCTATGGCTTTCCTTTC
GAGACTTCTCATCCGACCCAGTGTGGCACACAGATTTTTACTTGGGTTGATGGCACACCACCGTTTAATGCCCTC
ATATTTGTGTCGGACGGTACTATGCGAAATCTCAGTATTCCAGCGGATGCATACGACTCAGAACGTGCGGAGGGA
AGATTTTCATTTCCTCTGAACTTTAATCGAAGCCAGTCGATTATGTTTGCAATGGGAGATGCAACCGGGGTGACT
TCTGGCGGCATAACGGACGTCTTTACTGTCGGCTCGGCGTCTGAGAGTTCACCAAGTTGTAATACGACTGATCCT
GGCGTAGATTTCTTTTTTTCAACCAATTCTAAGCTCATACAATGCAAAGACTTCGAGTTTTCGCTCTTTCCCAAT
GCAGTGCAACCTATAACAATTCTTGTGACAGTAGCCAATGGAGAATCTTTCTACCTTCGTCCACCTCCGGGCGAT
CCATTTGTTTGGAAAGCCAACCTAACGTCAGGATCATCTGTCCTGTTCACGATGACAGACTCAAGAAATCGCGTG
GGCGGAACATCAGAGCTGAATATTGTAGGGGATTCAGATGATTCATCATGCCTCCGTCAACTTTCTCCGTCGGCT
GCACCAACTCGTACTCCACCGGCACCTACTTCAACATCCACTCCTACTCAGACACAGAGCGATGGAAAGAGGAAC
AACATAGGGTTAATCGTCGGCGCATCTATCGCTGGAGTTGTTGCAATTGCCATTATAGCCGTGCTTATTTACTTC
ATCTCTAAACGGAGTAGTAGAAAGGGACCCAAGGCTATCGATCTGACGGGAGGAGAGCCCGATTCTTCCACTGGT
CTGTTGTCCTTTGGCCAGCAACAGACTCGAAACCCTGCAATGAATCCATTCTCGTCATCCCATGATTCTACAATA
ACGCCATACAGTATCGGTTCACCTGCTGGGGCTTCGATGATGGGTAGTAACAGTATGGGAAACCTTTCAGCCGCC
GCGGGTATCGGGGCAGCTTCGGGAGTTGGAGCCGTGGCCGCTCAGGGCCGTCAAGCGAGAATGATCGCCAAACAT
GAAGCTATACAGCAGGATACATACCAAACATATCTTGATCCTTACAACTCTCCTTACGAACAAAGCCAGTCCGCC
GCATCTTCCAGTTCTGCCTACCAGACAACGTTCAACTCTCCTTCCGGACCCTCATCCACGTCGACCCGGAAGTCA
ACAATGGAGTCGTCCGCACAACTTACTCCACGGCGTTTCATCGTGCATACCGACATCGAAGATGAACCGATAGAA
TTGCCTCCAATGTATTCAGAACGGACGCATGGTTCTCAACGCTCATAA
Gene >AgabiH97|010260
ATGTGTTGTCTAGACTTTCTTTTATGTTTTTTTACGCTTGCTGCGTGTTTCCACCGTATCTATGGCTTTCCTTTC
GAGACTTCTCATCCGACCCAGTGTGGCACACAGATTTTTACTTGGGTTGGTAAGTGCCACCTTGTTACTGATATA
ATCTTGCTTTTCTACAATCTAGATTCTAATGTAAACAAACCATTTTGCAGATGGCACACCACCGTTTAATGCCCT
CATATTTGTGGTGTGTGTTCTTCGCCTTATTTCTATAAACCACACACGGTTGACCAGCGCGCGCGTTGTCATGTC
GTAGTCGGACGGTACTATGCGAAATCTCAGTATTCCAGCGGATGCATACGACTCAGAACGTGCGGAGGGAAGATT
TTCATTTCCTCTGAACTTTAATCGAAGCCAGTCGATTATGTTTGCAATGGGAGATGCAACCGGGGTGACTTCTGG
CGGCATAACGGACGTCTTTACTGTCGGCTCGGCGTCTGAGAGTTCACCAAGTTGTAATACGACTGATCCTGGTGG
GTTAGGAAAAGAGGTTGTGAATTGTATATTGACGATATTCCACAGGCGTAGATTTCTTTTTTTCAACCAATTCTA
AGCTCATACAATGCAAGTGAGTTTCGGCCGATCTACCTCCAATCCCTCAAGGGTGTTCTAACAACCAATCCATCC
AGAGACTTCGAGTTTTCGCTCTTTCCCAATGCAGTGCAACCTATAACAATTCTTGTACGTGACTACTGTATAACT
CTTTACCTTACTGACAATTTCTTTCTTGTAGGTGACAGTAGCCAATGGAGAATCTTTCTACCTTCGTCCACCTCC
GGGCGATCCATTTGTTTGGAAAGCCAACCTAACGTCAGGATCATCTGTCCTGTTCACGATGACAGACTCAAGAAA
TCGCGTGGGCGGAACATCAGAGCTGAATATTGTAGGGGATTCAGATGATTCATCATGCCTCCGTCAACTTTCTCC
GTCGGCTGCACCAACTCGTACTCCACCGGCACCTACTTCAACATCCACTCCTACTCAGACACAGAGCGATGGAAA
GAGGAACAACATAGGGTTAATCGTCGGCGCATCTATCGCTGGAGTTGTTGCAATTGCCATTATAGCCGTGCTTAT
TTACTTCATCTCTAAACGGAGTAGTAGAAAGGGACCCAAGGCTATCGATCTGACGGGAGGAGAGCCCGATTCTTC
CACTGGTCTGTTGTCCTTTGGCCAGCAACAGACTCGAAACCCTGCAATGAATCCATTCTCGTCATCCCATGATTC
TACAATAACGCCATACAGTATCGGTTCACCTGCTGGGGCTTCGATGATGGGTAGTAACAGTATGGGAAACCTTTC
AGCCGCCGCGGGTATCGGGGCAGCTTCGGGAGTTGGAGCCGTGGCCGCTCAGGGCCGTCAAGCGAGAATGATCGC
CAAACATGAAGCTATACAGCAGGATACATACCAAACATATCTTGATCCTTACAACTCTCCTTACGAACAAAGCCA
GTCCGCCGCATCTTCCAGTTCTGCCTACCAGACAACGTTCAACTCTCCTTCCGGACCCTCATCCACGTCGACCCG
GAAGTCAACAATGGAGTCGTCCGCACAACTTACTCCACGGCGTTTCATCGTGCATACCGACATCGAAGATGAACC
GATAGAATTGCCTCCAATGTATTCAGAACGGACGCATGGTTCTCAACGCTCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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