Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|010250
Gene name
Locationscaffold_1:2408956..2410884
Strand+
Gene length (bp)1928
Transcript length (bp)1659
Coding sequence length (bp)1659
Protein length (aa) 553

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

Domain # Start End Length
1 263 285 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|010250
MSVFLCLLVLFAPLVSAFSFSPGTPTECDAFPISWSGGTPPFTIHLVPVFNVPRNISVPAAAFKDGKGSFRIPQL
PIAAGTQFMVTMSDSTGFGTGGTTDLLNPGPSKGGKCSTAPPKIGFQFQLNDVLSQCKPYGFSAFNQAAQPVTIM
GLIPSGTPFVLNPPTGANQFSWTANVKTGTSVVFMMTDALGRSGGSSKLEVVVNSDDNTCLTGSFPSSTPAAPSS
TPKHTETSGRPSSTSSDAPSTTTSSEGSSSGSTSGGAIAGTVIGALLFAAVIVSLVLFFLKRRRTAQKAQMTTSP
TGFPPYGHNVNGYSLSSTANAAYNASAASPYTNAQFSPAPPPGQPQYPYGGHSYQQSAYSPSAYTTESQNHNLSR
THSGAARGGAYGGDHESSLLPYDPNPFSDQPPQQYPPAQYASQSTYELPSANAYALPNPYENPFNPPVDSREYPL
PPPPPPADDPFASAESSSATGSAMSAQQRKAAMAGATSQPPRIMQHTDAEDILPPANDDGVVELPPQYTERRGLA
VVNHTPTSSPSPDLTPMSYQHTRPPPS*
Coding >AgabiH97|010250
ATGTCGGTCTTTTTGTGCTTGCTCGTCCTCTTTGCGCCTCTTGTTTCTGCCTTCAGTTTCTCTCCTGGCACTCCC
ACTGAATGTGATGCCTTCCCTATCTCCTGGTCCGGCGGTACTCCACCATTCACCATTCACCTCGTTCCTGTGTTC
AATGTTCCCCGGAATATCTCGGTACCAGCAGCTGCCTTCAAAGATGGCAAAGGCTCCTTCAGAATCCCACAATTA
CCGATAGCAGCTGGGACCCAATTTATGGTGACAATGTCCGATTCGACAGGATTTGGAACAGGAGGCACGACTGAT
CTGCTAAACCCCGGCCCTTCCAAGGGTGGTAAATGCTCGACGGCGCCACCCAAAATTGGTTTTCAATTCCAATTG
AACGATGTCCTCTCTCAATGCAAGCCTTACGGTTTTAGTGCTTTCAATCAGGCCGCCCAACCCGTTACAATCATG
GGCCTTATTCCCTCGGGCACTCCTTTCGTCCTGAATCCCCCAACAGGAGCGAATCAGTTTTCCTGGACCGCAAAT
GTAAAAACCGGCACCTCTGTCGTCTTTATGATGACCGACGCGCTTGGCCGGTCAGGAGGAAGTTCTAAGCTTGAA
GTCGTCGTGAATTCCGACGATAACACATGCCTTACTGGCTCTTTCCCCTCTTCAACTCCAGCAGCACCCTCATCC
ACCCCGAAACACACAGAGACGTCTGGCCGGCCATCGTCAACCTCTAGTGATGCCCCTTCAACCACCACCAGCTCG
GAAGGTTCATCTTCGGGAAGTACTTCAGGTGGTGCTATTGCTGGAACTGTTATTGGTGCTCTGCTTTTCGCTGCC
GTCATCGTCTCCCTGGTGCTATTCTTTCTCAAGAGAAGAAGAACGGCTCAAAAAGCTCAGATGACTACCTCCCCA
ACCGGCTTCCCTCCTTACGGTCACAATGTCAATGGTTATTCTCTGTCCTCGACGGCCAATGCGGCATATAATGCT
TCTGCGGCTAGCCCTTATACCAATGCTCAATTCTCTCCGGCACCTCCACCTGGCCAACCTCAGTATCCTTATGGT
GGTCACTCATATCAACAGAGTGCTTATTCCCCTAGCGCCTATACCACTGAAAGTCAGAACCACAACCTCAGTCGT
ACTCATTCTGGTGCAGCACGTGGTGGAGCATATGGTGGTGACCATGAATCAAGCTTGTTGCCCTACGACCCAAAT
CCATTCTCGGATCAACCTCCTCAACAATACCCTCCTGCTCAATATGCATCTCAATCAACTTATGAGTTGCCCTCA
GCAAACGCATATGCCCTTCCCAATCCATACGAAAATCCCTTCAACCCCCCCGTGGACAGTCGGGAATATCCCCTA
CCACCGCCACCGCCACCTGCAGATGATCCCTTCGCATCCGCAGAAAGCTCATCTGCCACTGGTTCCGCGATGTCC
GCTCAGCAACGCAAAGCCGCGATGGCGGGCGCGACGTCTCAGCCTCCTCGAATCATGCAACACACCGATGCGGAG
GATATTCTACCACCTGCAAATGACGATGGTGTTGTGGAACTACCACCACAGTACACAGAGAGACGCGGGCTAGCC
GTGGTCAACCACACTCCCACCTCATCACCTTCTCCCGATCTAACCCCAATGTCTTATCAACACACTCGCCCGCCG
CCATCATAG
Transcript >AgabiH97|010250
ATGTCGGTCTTTTTGTGCTTGCTCGTCCTCTTTGCGCCTCTTGTTTCTGCCTTCAGTTTCTCTCCTGGCACTCCC
ACTGAATGTGATGCCTTCCCTATCTCCTGGTCCGGCGGTACTCCACCATTCACCATTCACCTCGTTCCTGTGTTC
AATGTTCCCCGGAATATCTCGGTACCAGCAGCTGCCTTCAAAGATGGCAAAGGCTCCTTCAGAATCCCACAATTA
CCGATAGCAGCTGGGACCCAATTTATGGTGACAATGTCCGATTCGACAGGATTTGGAACAGGAGGCACGACTGAT
CTGCTAAACCCCGGCCCTTCCAAGGGTGGTAAATGCTCGACGGCGCCACCCAAAATTGGTTTTCAATTCCAATTG
AACGATGTCCTCTCTCAATGCAAGCCTTACGGTTTTAGTGCTTTCAATCAGGCCGCCCAACCCGTTACAATCATG
GGCCTTATTCCCTCGGGCACTCCTTTCGTCCTGAATCCCCCAACAGGAGCGAATCAGTTTTCCTGGACCGCAAAT
GTAAAAACCGGCACCTCTGTCGTCTTTATGATGACCGACGCGCTTGGCCGGTCAGGAGGAAGTTCTAAGCTTGAA
GTCGTCGTGAATTCCGACGATAACACATGCCTTACTGGCTCTTTCCCCTCTTCAACTCCAGCAGCACCCTCATCC
ACCCCGAAACACACAGAGACGTCTGGCCGGCCATCGTCAACCTCTAGTGATGCCCCTTCAACCACCACCAGCTCG
GAAGGTTCATCTTCGGGAAGTACTTCAGGTGGTGCTATTGCTGGAACTGTTATTGGTGCTCTGCTTTTCGCTGCC
GTCATCGTCTCCCTGGTGCTATTCTTTCTCAAGAGAAGAAGAACGGCTCAAAAAGCTCAGATGACTACCTCCCCA
ACCGGCTTCCCTCCTTACGGTCACAATGTCAATGGTTATTCTCTGTCCTCGACGGCCAATGCGGCATATAATGCT
TCTGCGGCTAGCCCTTATACCAATGCTCAATTCTCTCCGGCACCTCCACCTGGCCAACCTCAGTATCCTTATGGT
GGTCACTCATATCAACAGAGTGCTTATTCCCCTAGCGCCTATACCACTGAAAGTCAGAACCACAACCTCAGTCGT
ACTCATTCTGGTGCAGCACGTGGTGGAGCATATGGTGGTGACCATGAATCAAGCTTGTTGCCCTACGACCCAAAT
CCATTCTCGGATCAACCTCCTCAACAATACCCTCCTGCTCAATATGCATCTCAATCAACTTATGAGTTGCCCTCA
GCAAACGCATATGCCCTTCCCAATCCATACGAAAATCCCTTCAACCCCCCCGTGGACAGTCGGGAATATCCCCTA
CCACCGCCACCGCCACCTGCAGATGATCCCTTCGCATCCGCAGAAAGCTCATCTGCCACTGGTTCCGCGATGTCC
GCTCAGCAACGCAAAGCCGCGATGGCGGGCGCGACGTCTCAGCCTCCTCGAATCATGCAACACACCGATGCGGAG
GATATTCTACCACCTGCAAATGACGATGGTGTTGTGGAACTACCACCACAGTACACAGAGAGACGCGGGCTAGCC
GTGGTCAACCACACTCCCACCTCATCACCTTCTCCCGATCTAACCCCAATGTCTTATCAACACACTCGCCCGCCG
CCATCATAG
Gene >AgabiH97|010250
ATGTCGGTCTTTTTGTGCTTGCTCGTCCTCTTTGCGCCTCTTGTTTCTGCCTTCAGTTTCTCTCCTGGCACTCCC
ACTGAATGTGATGCCTTCCCTATCTCCTGGTCCGGTAAGTGGCTCCACTTTCCACAATCACAGCTTCTGATTCTA
CAAATCTGAAGGCGGTACTCCACCATTCACCATTCACCTCGTTCCTGTGCGTCAATGACCGCAAAACAGTCGCGT
GTAAACCTACCCCTAAACTCTCCCCTTTTTTTCATTCTAGGTGTTCAATGTTCCCCGGAATATCTCGGTACCAGC
AGCTGCCTTCAAAGATGGCAAAGGCTCCTTCAGAATCCCACAATTACCGATAGCAGCTGGGACCCAATTTATGGT
GACAATGTCCGATTCGACAGGATTTGGAACAGGAGGCACGACTGATCTGCTAAACCCCGGCCCTTCCAAGGGTGG
TAAATGCTCGACGGCGCCACCCAGTGAGTTTAAATTGACATGTCTTTGAATGCCCAATTGATGATATTATAGAAA
TTGGTTTTCAATTCCAATTGAACGATGTCCTCTCTCAATGCAAGTGCGTTACATCAAGAAACTCACCGACTCTGG
CCCATACTTATGTCTTCTAGGCCTTACGGTTTTAGTGCTTTCAATCAGGCCGCCCAACCCGTTACAATCATGGTG
CGAAGATTTTTATCACAGTTTCGAATAAGCTGAACTATTATCAGGGCCTTATTCCCTCGGGCACTCCTTTCGTCC
TGAATCCCCCAACAGGAGCGAATCAGTTTTCCTGGACCGCAAATGTAAAAACCGGCACCTCTGTCGTCTTTATGA
TGACCGACGCGCTTGGCCGGTCAGGAGGAAGTTCTAAGCTTGAAGTCGTCGTGAATTCCGACGATAACACATGCC
TTACTGGCTCTTTCCCCTCTTCAACTCCAGCAGCACCCTCATCCACCCCGAAACACACAGAGACGTCTGGCCGGC
CATCGTCAACCTCTAGTGATGCCCCTTCAACCACCACCAGCTCGGAAGGTTCATCTTCGGGAAGTACTTCAGGTG
GTGCTATTGCTGGAACTGTTATTGGTGCTCTGCTTTTCGCTGCCGTCATCGTCTCCCTGGTGCTATTCTTTCTCA
AGAGAAGAAGAACGGCTCAAAAAGCTCAGATGACTACCTCCCCAACCGGCTTCCCTCCTTACGGTCACAATGTCA
ATGGTTATTCTCTGTCCTCGACGGCCAATGCGGCATATAATGCTTCTGCGGCTAGCCCTTATACCAATGCTCAAT
TCTCTCCGGCACCTCCACCTGGCCAACCTCAGTATCCTTATGGTGGTCACTCATATCAACAGAGTGCTTATTCCC
CTAGCGCCTATACCACTGAAAGTCAGAACCACAACCTCAGTCGTACTCATTCTGGTGCAGCACGTGGTGGAGCAT
ATGGTGGTGACCATGAATCAAGCTTGTTGCCCTACGACCCAAATCCATTCTCGGATCAACCTCCTCAACAATACC
CTCCTGCTCAATATGCATCTCAATCAACTTATGAGTTGCCCTCAGCAAACGCATATGCCCTTCCCAATCCATACG
AAAATCCCTTCAACCCCCCCGTGGACAGTCGGGAATATCCCCTACCACCGCCACCGCCACCTGCAGATGATCCCT
TCGCATCCGCAGAAAGCTCATCTGCCACTGGTTCCGCGATGTCCGCTCAGCAACGCAAAGCCGCGATGGCGGGCG
CGACGTCTCAGCCTCCTCGAATCATGCAACACACCGATGCGGAGGATATTCTACCACCTGCAAATGACGATGGTG
TTGTGGAACTACCACCACAGTACACAGAGAGACGCGGGCTAGCCGTGGTCAACCACACTCCCACCTCATCACCTT
CTCCCGATCTAACCCCAATGTCTTATCAACACACTCGCCCGCCGCCATCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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