© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|010010 |
| Gene name | |
| Location | scaffold_1:2360215..2363093 |
| Strand | + |
| Gene length (bp) | 2878 |
| Transcript length (bp) | 2727 |
| Coding sequence length (bp) | 2727 |
| Protein length (aa) | 909 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02469 | Fasciclin | Fasciclin domain | 1.1E-09 | 31 | 200 |
| PF02469 | Fasciclin | Fasciclin domain | 9.8E-13 | 221 | 336 |
| PF02469 | Fasciclin | Fasciclin domain | 1.0E-13 | 352 | 484 |
| PF02469 | Fasciclin | Fasciclin domain | 6.0E-11 | 497 | 630 |
| PF02469 | Fasciclin | Fasciclin domain | 1.6E-05 | 647 | 731 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q15063|POSTN_HUMAN | Periostin OS=Homo sapiens GN=POSTN PE=1 SV=2 | 186 | 630 | 2.0E-22 |
| sp|Q62009|POSTN_MOUSE | Periostin OS=Mus musculus GN=Postn PE=1 SV=2 | 186 | 638 | 6.0E-22 |
| sp|Q15582|BGH3_HUMAN | Transforming growth factor-beta-induced protein ig-h3 OS=Homo sapiens GN=TGFBI PE=1 SV=1 | 43 | 630 | 8.0E-15 |
| sp|O11780|BGH3_PIG | Transforming growth factor-beta-induced protein ig-h3 OS=Sus scrofa GN=TGFBI PE=1 SV=1 | 43 | 630 | 7.0E-14 |
| sp|P82198|BGH3_MOUSE | Transforming growth factor-beta-induced protein ig-h3 OS=Mus musculus GN=Tgfbi PE=1 SV=1 | 43 | 630 | 2.0E-13 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q15063|POSTN_HUMAN | Periostin OS=Homo sapiens GN=POSTN PE=1 SV=2 | 186 | 630 | 2.0E-22 |
| sp|Q62009|POSTN_MOUSE | Periostin OS=Mus musculus GN=Postn PE=1 SV=2 | 186 | 638 | 6.0E-22 |
| sp|Q15582|BGH3_HUMAN | Transforming growth factor-beta-induced protein ig-h3 OS=Homo sapiens GN=TGFBI PE=1 SV=1 | 43 | 630 | 8.0E-15 |
| sp|O11780|BGH3_PIG | Transforming growth factor-beta-induced protein ig-h3 OS=Sus scrofa GN=TGFBI PE=1 SV=1 | 43 | 630 | 7.0E-14 |
| sp|P82198|BGH3_MOUSE | Transforming growth factor-beta-induced protein ig-h3 OS=Mus musculus GN=Tgfbi PE=1 SV=1 | 43 | 630 | 2.0E-13 |
| sp|Q95215|BGH3_RABIT | Transforming growth factor-beta-induced protein ig-h3 OS=Oryctolagus cuniculus GN=TGFBI PE=2 SV=2 | 55 | 630 | 6.0E-11 |
| sp|O94439|FSC1_SCHPO | FAS1 domain-containing protein fsc1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fsc1 PE=3 SV=1 | 175 | 633 | 4.0E-09 |
| sp|Q15063|POSTN_HUMAN | Periostin OS=Homo sapiens GN=POSTN PE=1 SV=2 | 235 | 718 | 1.0E-08 |
| sp|Q62009|POSTN_MOUSE | Periostin OS=Mus musculus GN=Postn PE=1 SV=2 | 236 | 718 | 4.0E-06 |
| sp|Q8R4U0|STAB2_MOUSE | Stabilin-2 OS=Mus musculus GN=Stab2 PE=1 SV=1 | 216 | 430 | 6.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 18 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 857 | 879 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|010010 MRLSVCLAALLARPALALSSTITDVLSADPDYEALLRLLQRTRLIPTLNTLPAATLFAPTNDAISKHDLWAHALD DAFVLTDNVNEQLRQQLFYHMLNFSIAQGPAPEQSPPLHTFDTLLYPHKPLDPPSHEPPPHPPWMPIPSGTLGEK SQRLRAVLADDNQKGRVAVDAFGKGGADIVKPIVNATNGAVLGISDVLIPPLDLATVVSAQQSLSYFRRIVTPHV IKFLNSTSELTLFLPVDNAWDQLNKYERIYLESEFASDDLSRIFNMHAVAKTGVKWSDSFTPGINLSTIDGTTLE VVTTTEGTKVSGGDLVHPDIYASNGVLHLVSSLLIPEGALQITPEKYLLALNCTSFVSMLRSVNLTDLIRDTEQK YTILAPQDDVLDVLGDSDLPEKGSPELKKLLQYHFVPGHWTAEKLENGMLLETTLEEEGLKGGKQVLSVDVHHSG KDSKGLQFAGASVIGDPIELDNILVYFLSRPIVPPSDSISTALPSLDLSNFLAALLSSSQSDIIRTTPRTSLLIP YNSAFKRLGLLVSAHLLSTSYKQDLEKVILHHTLSDVEYSSNLVNGSQQTFQTLEGSDIKLERMDNGTVLISPSG GWPGMKSRLVPRDTLTQTGVIHELSDILLPRSVDITIGKLMKAAKGSTMTSLFNRAGFEWILNGTAPPDDWSWPD EKNPGGGIGWTVLCPTDDAFKNHNLTELFANPMRLKSIVMQHIILSPYPKDQRQRLDARHDFEEMYNNQPLVLED TATYSTLRDNESFYGDIVFKSTGAEEDGTTQFIVGIKDARGTDGSGDWAKVLGWGRSTTSAFPTFEPTQLDSEPA QMGFSTRAGFIGGAAGGVIQIDRLILPYEPPWWISYGAPSVVGFAGMVAICGFFYGVRIVWGWDTTEATYEPVGG FGRNDDEE* |
| Coding | >AgabiH97|010010 ATGCGTCTCTCCGTCTGCCTCGCCGCCCTCCTCGCCCGCCCCGCCCTCGCTCTCTCGTCTACCATCACCGACGTC CTCAGCGCAGACCCCGACTACGAGGCCCTCCTCCGTCTCCTCCAGCGCACGCGTCTCATCCCCACCCTCAACACT CTTCCCGCAGCTACTCTCTTCGCCCCCACCAATGACGCCATCAGCAAACACGATCTTTGGGCACACGCCCTCGAC GACGCCTTCGTCCTCACCGACAACGTCAACGAACAACTCCGCCAGCAGCTCTTCTATCATATGCTCAATTTCTCT ATTGCCCAGGGACCAGCTCCTGAACAGTCTCCACCCCTTCACACTTTCGACACCCTCCTCTATCCCCACAAGCCT CTAGATCCTCCTTCCCACGAACCCCCACCCCATCCTCCCTGGATGCCCATCCCTTCAGGAACTCTGGGCGAAAAG TCCCAGCGACTACGCGCAGTCCTAGCCGACGACAACCAGAAAGGCCGGGTCGCCGTTGATGCTTTCGGCAAAGGT GGTGCCGATATCGTCAAACCTATCGTCAATGCCACGAATGGCGCCGTTCTCGGTATTTCAGATGTCCTAATCCCT CCCCTAGACCTTGCTACCGTCGTATCTGCGCAACAGTCACTCTCCTATTTCCGTCGCATCGTCACGCCCCACGTC ATCAAGTTTCTTAATTCGACTTCTGAACTCACCCTGTTCCTCCCGGTTGATAACGCCTGGGACCAACTCAACAAA TACGAGAGGATATATCTCGAGAGCGAGTTTGCTTCCGACGATCTCAGTCGCATATTTAATATGCATGCCGTTGCA AAGACAGGCGTAAAGTGGTCTGATTCATTTACCCCAGGCATCAACCTCTCGACGATCGACGGAACAACTCTCGAA GTAGTCACCACTACCGAGGGTACTAAAGTTTCTGGCGGTGACCTCGTGCACCCAGACATCTATGCTTCCAATGGC GTCCTTCACCTCGTTTCCTCATTGCTCATTCCCGAAGGCGCATTACAAATTACCCCAGAAAAGTACCTCCTCGCC CTTAATTGCACATCTTTCGTCTCCATGCTTCGTTCCGTAAACCTTACTGATCTCATCCGTGACACCGAACAGAAA TATACTATCCTAGCCCCTCAGGATGACGTACTCGATGTCCTTGGTGACAGTGATTTGCCCGAGAAAGGAAGTCCG GAGCTAAAGAAACTCCTTCAATATCATTTCGTTCCTGGTCACTGGACCGCCGAGAAGCTTGAAAATGGAATGTTG CTAGAGACGACATTGGAAGAAGAGGGGTTAAAGGGTGGGAAGCAGGTTTTGTCCGTTGATGTCCATCATAGCGGC AAAGATTCCAAGGGTTTGCAATTTGCTGGAGCCAGTGTCATCGGCGATCCAATCGAACTTGACAACATCTTGGTT TACTTTCTTTCAAGGCCCATAGTGCCTCCCTCGGATTCCATTTCCACCGCTCTCCCTTCCCTCGACTTGTCCAAC TTCCTTGCCGCACTCCTTTCTTCCAGCCAATCTGACATCATTAGAACAACACCTCGCACTTCTCTTCTCATTCCG TACAATTCCGCTTTTAAACGCCTTGGTCTCCTTGTCAGCGCACATCTTCTCAGTACATCCTACAAACAAGATCTT GAAAAAGTCATTCTGCACCACACACTCTCCGATGTCGAGTACTCGAGCAACCTCGTTAATGGCTCTCAACAAACT TTTCAAACGTTGGAAGGTAGCGATATCAAACTTGAACGTATGGACAACGGTACCGTTCTCATTAGCCCAAGTGGT GGCTGGCCTGGCATGAAATCGCGTCTTGTTCCACGAGACACTTTGACTCAGACGGGTGTCATCCATGAGTTGTCC GATATACTCCTGCCGAGGTCGGTCGACATTACGATCGGGAAACTCATGAAAGCTGCCAAAGGAAGTACTATGACA AGTCTGTTCAATCGTGCCGGCTTTGAATGGATTCTGAATGGAACTGCGCCACCGGATGACTGGTCATGGCCTGAT GAGAAGAATCCCGGCGGTGGTATTGGTTGGACGGTGCTGTGTCCCACGGACGATGCCTTTAAGAACCACAATCTC ACTGAACTCTTCGCTAATCCCATGAGATTGAAATCCATTGTCATGCAACATATCATTCTTTCCCCTTATCCTAAA GACCAACGTCAACGATTAGACGCTAGACATGATTTTGAGGAGATGTACAACAACCAGCCTTTGGTTCTGGAAGAT ACCGCCACCTATTCGACTCTGAGGGACAATGAATCGTTTTACGGGGATATTGTGTTTAAGTCTACGGGAGCGGAA GAGGACGGTACGACGCAATTCATCGTTGGGATCAAAGACGCACGAGGTACAGATGGCTCCGGAGATTGGGCCAAA GTTTTGGGATGGGGTCGGAGCACAACTTCCGCTTTCCCTACCTTTGAACCCACACAATTAGATTCCGAACCCGCG CAAATGGGATTCTCGACAAGGGCAGGATTTATCGGGGGTGCAGCTGGCGGTGTGATTCAAATTGATAGACTCATT TTACCTTACGAGCCTCCTTGGTGGATTTCTTATGGTGCACCATCGGTGGTTGGATTTGCGGGTATGGTCGCGATA TGTGGTTTCTTTTATGGTGTTCGAATTGTTTGGGGTTGGGATACGACTGAGGCGACGTATGAACCTGTTGGTGGA TTTGGGAGAAATGATGATGAGGAATAG |
| Transcript | >AgabiH97|010010 ATGCGTCTCTCCGTCTGCCTCGCCGCCCTCCTCGCCCGCCCCGCCCTCGCTCTCTCGTCTACCATCACCGACGTC CTCAGCGCAGACCCCGACTACGAGGCCCTCCTCCGTCTCCTCCAGCGCACGCGTCTCATCCCCACCCTCAACACT CTTCCCGCAGCTACTCTCTTCGCCCCCACCAATGACGCCATCAGCAAACACGATCTTTGGGCACACGCCCTCGAC GACGCCTTCGTCCTCACCGACAACGTCAACGAACAACTCCGCCAGCAGCTCTTCTATCATATGCTCAATTTCTCT ATTGCCCAGGGACCAGCTCCTGAACAGTCTCCACCCCTTCACACTTTCGACACCCTCCTCTATCCCCACAAGCCT CTAGATCCTCCTTCCCACGAACCCCCACCCCATCCTCCCTGGATGCCCATCCCTTCAGGAACTCTGGGCGAAAAG TCCCAGCGACTACGCGCAGTCCTAGCCGACGACAACCAGAAAGGCCGGGTCGCCGTTGATGCTTTCGGCAAAGGT GGTGCCGATATCGTCAAACCTATCGTCAATGCCACGAATGGCGCCGTTCTCGGTATTTCAGATGTCCTAATCCCT CCCCTAGACCTTGCTACCGTCGTATCTGCGCAACAGTCACTCTCCTATTTCCGTCGCATCGTCACGCCCCACGTC ATCAAGTTTCTTAATTCGACTTCTGAACTCACCCTGTTCCTCCCGGTTGATAACGCCTGGGACCAACTCAACAAA TACGAGAGGATATATCTCGAGAGCGAGTTTGCTTCCGACGATCTCAGTCGCATATTTAATATGCATGCCGTTGCA AAGACAGGCGTAAAGTGGTCTGATTCATTTACCCCAGGCATCAACCTCTCGACGATCGACGGAACAACTCTCGAA GTAGTCACCACTACCGAGGGTACTAAAGTTTCTGGCGGTGACCTCGTGCACCCAGACATCTATGCTTCCAATGGC GTCCTTCACCTCGTTTCCTCATTGCTCATTCCCGAAGGCGCATTACAAATTACCCCAGAAAAGTACCTCCTCGCC CTTAATTGCACATCTTTCGTCTCCATGCTTCGTTCCGTAAACCTTACTGATCTCATCCGTGACACCGAACAGAAA TATACTATCCTAGCCCCTCAGGATGACGTACTCGATGTCCTTGGTGACAGTGATTTGCCCGAGAAAGGAAGTCCG GAGCTAAAGAAACTCCTTCAATATCATTTCGTTCCTGGTCACTGGACCGCCGAGAAGCTTGAAAATGGAATGTTG CTAGAGACGACATTGGAAGAAGAGGGGTTAAAGGGTGGGAAGCAGGTTTTGTCCGTTGATGTCCATCATAGCGGC AAAGATTCCAAGGGTTTGCAATTTGCTGGAGCCAGTGTCATCGGCGATCCAATCGAACTTGACAACATCTTGGTT TACTTTCTTTCAAGGCCCATAGTGCCTCCCTCGGATTCCATTTCCACCGCTCTCCCTTCCCTCGACTTGTCCAAC TTCCTTGCCGCACTCCTTTCTTCCAGCCAATCTGACATCATTAGAACAACACCTCGCACTTCTCTTCTCATTCCG TACAATTCCGCTTTTAAACGCCTTGGTCTCCTTGTCAGCGCACATCTTCTCAGTACATCCTACAAACAAGATCTT GAAAAAGTCATTCTGCACCACACACTCTCCGATGTCGAGTACTCGAGCAACCTCGTTAATGGCTCTCAACAAACT TTTCAAACGTTGGAAGGTAGCGATATCAAACTTGAACGTATGGACAACGGTACCGTTCTCATTAGCCCAAGTGGT GGCTGGCCTGGCATGAAATCGCGTCTTGTTCCACGAGACACTTTGACTCAGACGGGTGTCATCCATGAGTTGTCC GATATACTCCTGCCGAGGTCGGTCGACATTACGATCGGGAAACTCATGAAAGCTGCCAAAGGAAGTACTATGACA AGTCTGTTCAATCGTGCCGGCTTTGAATGGATTCTGAATGGAACTGCGCCACCGGATGACTGGTCATGGCCTGAT GAGAAGAATCCCGGCGGTGGTATTGGTTGGACGGTGCTGTGTCCCACGGACGATGCCTTTAAGAACCACAATCTC ACTGAACTCTTCGCTAATCCCATGAGATTGAAATCCATTGTCATGCAACATATCATTCTTTCCCCTTATCCTAAA GACCAACGTCAACGATTAGACGCTAGACATGATTTTGAGGAGATGTACAACAACCAGCCTTTGGTTCTGGAAGAT ACCGCCACCTATTCGACTCTGAGGGACAATGAATCGTTTTACGGGGATATTGTGTTTAAGTCTACGGGAGCGGAA GAGGACGGTACGACGCAATTCATCGTTGGGATCAAAGACGCACGAGGTACAGATGGCTCCGGAGATTGGGCCAAA GTTTTGGGATGGGGTCGGAGCACAACTTCCGCTTTCCCTACCTTTGAACCCACACAATTAGATTCCGAACCCGCG CAAATGGGATTCTCGACAAGGGCAGGATTTATCGGGGGTGCAGCTGGCGGTGTGATTCAAATTGATAGACTCATT TTACCTTACGAGCCTCCTTGGTGGATTTCTTATGGTGCACCATCGGTGGTTGGATTTGCGGGTATGGTCGCGATA TGTGGTTTCTTTTATGGTGTTCGAATTGTTTGGGGTTGGGATACGACTGAGGCGACGTATGAACCTGTTGGTGGA TTTGGGAGAAATGATGATGAGGAATAG |
| Gene | >AgabiH97|010010 ATGCGTCTCTCCGTCTGCCTCGCCGCCCTCCTCGCCCGCCCCGCCCTCGCTCTCTCGTCTACCATCACCGACGTC CTCAGCGCAGACCCCGACTACGAGGCCCTCCTCCGTCTCCTCCAGCGCACGCGTCTCATCCCCACCCTCAACACT CTTCCCGCAGCTACTCTCTTCGCCCCCACCAATGACGCCATCAGCAAACACGATCTTTGGGCACACGCCCTCGAC GACGCCTTCGTCCTCACCGACAACGTCAACGAACAACTCCGCCAGCAGCTCTTCTATCATATGCTCAATTTCTCT ATTGCCCAGGGACCAGCTCCTGAACAGTCTCCACCCCTTCACACTTTCGACACCCTCCTCTATCCCCACAAGCCT CTAGATCCTCCTTCCCACGAACCCCCACCCCATCCTCCCTGGATGCCCATCCCTTCAGGAACTCTGGGCGAAAAG TCCCAGCGACTACGCGCAGTCCTAGCCGACGACAACCAGAAAGGCCGGGTCGCCGTTGATGCTTTCGGCAAAGGT GGTGCCGATATCGTCAAACCTATCGTCAATGCCACGAATGGCGCCGTTCTCGGTATTTCAGATGTCCTAATCCCT CCCCTAGACCTTGGTATGTCTCCGCATTAACCGTGCCCCGCTCGTCCTCATGCTGTTCTAGCTACCGTCGTATCT GCGCAACAGTCACTCTCCTATTTCCGTCGCATCGTCACGCCCCACGTCATCAAGTTTCTTAATTCGACTTCTGAA CTCACCCTGTTCCTCCCGGTTGATAACGCCTGGGACCAACTCAACAAATACGAGAGGATATATCTCGAGAGCGAG TTTGCTTCCGACGATCTCAGTCGCATATTTAATATGCATGCCGTTGCAAAGACAGGCGTAAAGTGGTCTGATTCA TTTACCCCAGGCATCAACCGTAATTCAGTCCAGTTCAGTCCTTGCAGACCCCTCGCTAACACGCGTCTATAGTCT CGACGATCGACGGAACAACTCTCGAAGTAGTCACCACTACCGAGGGTACTAAAGTTTCTGGCGGTGACCTCGTGC ACCCAGACATCTATGCTTCCAATGGCGTCCTTCACCTCGTTTCCTCATTGCTCATTCCCGAAGGCGCATTACAAA TTACCCCAGAAAAGTACCTCCTCGCCCTTAATTGCACATCTTTCGTCTCCATGCTTCGTTCCGTAAACCTTACTG ATCTCATCCGTGACACCGAACAGAAATATACTATCCTAGCCCCTCAGGATGACGTACTCGATGTCCTTGGTGACA GTGATTTGCCCGAGAAAGGAAGTCCGGAGCTAAAGAAACTCCTTCAATATCATTTCGTTCCTGGTCACTGGACCG CCGAGAAGCTTGAAAATGGAATGTTGCTAGAGACGACATTGGAAGAAGAGGGGTTAAAGGGTGGGAAGCAGGTTT TGTCCGTTGATGTCCATCATAGCGGCAAAGATTCCAAGGGTTTGCAATTTGCTGGAGCCAGTGTCATCGGCGATC CAAGTAAGCTTTGATAACTTTTATGCAAAGTGAGATGCTCATAGTCTCGGCAGTCGAACTTGACAACATCTTGGT TTACTTTCTTTCAAGGCCCATAGTGCCTCCCTCGGATTCCATTTCCACCGCTCTCCCTTCCCTCGACTTGTCCAA CTTCCTTGCCGCACTCCTTTCTTCCAGCCAATCTGACATCATTAGAACAACACCTCGCACTTCTCTTCTCATTCC GTACAATTCCGCTTTTAAACGCCTTGGTCTCCTTGTCAGCGCACATCTTCTCAGTACATCCTACAAACAAGATCT TGAAAAAGTCATTCTGCACCACACACTCTCCGATGTCGAGTACTCGAGCAACCTCGTTAATGGCTCTCAACAAAC TTTTCAAACGTTGGAAGGTAGCGATATCAAACTTGAACGTATGGACAACGGTACCGTTCTCATTAGCCCAAGTGG TGGCTGGCCTGGCATGAAATCGCGTCTTGTTCCACGAGACACTTTGACTCAGACGGGTGTCATCCATGAGTTGTC CGATATACTCCTGCCGAGGTCGGTCGACATTACGATCGGGAAACTCATGAAAGCTGCCAAAGGAAGTACTATGAC AAGTCTGTTCAATCGTGCCGGCTTTGAATGGATTCTGAATGGAACTGCGCCACCGGATGACTGGTCATGGCCTGA TGAGAAGAATCCCGGCGGTGGTATTGGTTGGACGGTGCTGTGTCCCACGGACGATGCCTTTAAGAACCACAATCT CACTGAACTCTTCGCTAATCCCATGAGATTGAAATCCATTGTCATGCAACATATCATTCTTTCCCCTTATCCTAA AGACCAACGTCAACGATTAGACGCTAGACATGATTTTGAGGAGATGTACAACAACCAGCCTTTGGTTCTGGAAGA TACCGCCACCTATTCGACTCTGAGGGACAATGAATCGTTTTACGGGGATATTGTGTTTAAGTCTACGGGAGCGGA AGAGGACGGTACGACGCAATTCATCGTTGGGATCAAAGACGCACGAGGTACAGATGGCTCCGGAGATTGGGCCAA AGTTTTGGGATGGGGTCGGAGCACAACTTCCGCTTTCCCTACCTTTGAACCCACACAATTAGATTCCGAACCCGC GCAAATGGGATTCTCGACAAGGGCAGGATTTATCGGGGGTGCAGCTGGCGGTGTGATTCAAATTGATAGACTCAT TTTACCTTACGAGCCTCCTTGGTGGATTTCTTATGGTGCACCATCGGTGGTTGGATTTGCGGGTATGGTCGCGAT ATGTGGTTTCTTTTATGGTGTTCGAATTGTTTGGGGTTGGGATACGACTGAGGCGACGTATGAACCTGTTGGTGG ATTTGGGAGAAATGATGATGAGGAATAG |