Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|009760
Gene name
Locationscaffold_1:2301161..2303628
Strand-
Gene length (bp)2467
Transcript length (bp)1533
Coding sequence length (bp)1533
Protein length (aa) 511

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 3.8E-29 53 419
PF06813 Nodulin-like Nodulin-like 2.5E-07 278 465

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 37 474 3.0E-84
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 8 470 2.0E-76
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 37 466 6.0E-75
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 4 464 5.0E-70
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 38 468 1.0E-51
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Swissprot ID Swissprot Description Start End E-value
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 37 474 3.0E-84
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 8 470 2.0E-76
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 37 466 6.0E-75
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 4 464 5.0E-70
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 38 468 1.0E-51
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 38 344 5.0E-42
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 2 474 5.0E-41
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 38 377 3.0E-40
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 41 470 2.0E-37
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 14 466 3.0E-33
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 9 471 1.0E-32
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 5 471 2.0E-31
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 34 245 3.0E-31
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 13 478 3.0E-31
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 38 472 2.0E-30
sp|O13879|YE1F_SCHPO Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 9 485 1.0E-28
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 18 449 3.0E-27
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 39 388 6.0E-26
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 21 466 6.0E-24
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 16 377 3.0E-23
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 2 466 2.0E-21
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 8 318 1.0E-18
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 20 281 3.0E-16
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 34 473 2.0E-15
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 10 261 7.0E-13
sp|P0CF20|YO163_YEAST Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 121 256 1.0E-12
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 40 310 2.0E-12
sp|Q0K843|SAUU_CUPNH Probable sulfoacetate transporter SauU OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauU PE=2 SV=1 53 468 5.0E-09
sp|P39398|LGOT_ECOLI Probable L-galactonate transporter OS=Escherichia coli (strain K12) GN=lgoT PE=1 SV=2 36 235 7.0E-08
sp|P0AA76|DGOT_ECOLI D-galactonate transporter OS=Escherichia coli (strain K12) GN=dgoT PE=1 SV=1 62 324 9.0E-07
sp|P0AA77|DGOT_ECOL6 D-galactonate transporter OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=dgoT PE=3 SV=1 62 324 9.0E-07
sp|P42237|GUDP_BACSU Probable glucarate transporter OS=Bacillus subtilis (strain 168) GN=gudP PE=3 SV=2 32 182 8.0E-06
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GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0051234 establishment of localization No
GO:0008150 biological_process No
GO:0009987 cellular process No
GO:0005215 transporter activity No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 65 0.45

Transmembrane Domains

Domain # Start End Length
1 86 108 22
2 115 134 19
3 140 162 22
4 175 197 22
5 207 229 22
6 283 305 22
7 315 337 22
8 344 363 19
9 368 390 22
10 403 425 22
11 435 457 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|009760
MSAKNEVHDEINSHKEDQKYVHEEELYQPEVDTSGIDEKKLMRKVDWNVIPWLALLYLLNSLDRGNIGNAKLYSL
EHDLRMSDKQYLLALTLFFFPYSLFEPASNVALRRLKPSTWLSSMLVLWGIVMTMHGVVNNYAGLVALRLLLGLC
EAGLYPGIAFYITSWYKSSEMGTKFALFFSSATIAGAFSGLLAAAIANMDGVGNKPAWAWIFILEGLFTVVIGLL
SYVVIQDFPHNAKFLSETERVFIIRRLQSDNKLSAGGGETYRFAHVKKSLKDWKTWFAMAIYMGFDGPLYAFSLF
TPSIINQLGFTATKANLLSVPVYAWGCLVTVAIGFWADRLGKRCLVNIGLFGTGLVGYIILICSRTPALSYFAVF
LAISSIFPTVPNSVTWVASNVEGSYKRAVTLGVAIGFGNLNGAVTSNIYRAKDQPWYRLGHAIVLGYIIIGIISS
LLFAYFLRRENIKRDRGERDEVIEASRLRRWIRVTIGADSGTLSSETITSFMQYIASKRQ*
Coding >AgabiH97|009760
ATGTCTGCCAAAAACGAAGTTCATGACGAAATCAACAGCCACAAAGAGGATCAAAAATATGTACACGAGGAAGAG
CTATATCAACCAGAAGTTGATACTTCTGGCATCGATGAAAAGAAGCTGATGCGGAAGGTGGACTGGAACGTCATA
CCATGGCTTGCCCTATTGTATCTTCTCAATTCCCTGGACCGAGGAAACATCGGGAACGCCAAACTATACAGCTTG
GAGCATGACTTGAGAATGAGCGACAAACAATATCTCCTAGCTTTGACTCTGTTCTTCTTTCCATATTCACTATTC
GAGCCGGCAAGCAATGTTGCGTTGCGAAGACTTAAGCCTTCGACATGGCTATCTTCAATGTTGGTACTATGGGGA
ATTGTAATGACAATGCATGGAGTAGTTAATAATTATGCAGGACTGGTTGCTTTACGGCTTTTACTTGGACTGTGC
GAGGCCGGACTATACCCTGGGATCGCTTTCTATATCACTAGTTGGTACAAGAGTTCAGAAATGGGGACGAAATTT
GCACTATTTTTCTCGTCAGCCACAATCGCTGGTGCCTTCAGCGGCCTGCTGGCAGCTGCAATTGCCAATATGGAT
GGAGTTGGAAATAAACCAGCCTGGGCTTGGATTTTTATCTTGGAGGGCCTTTTCACCGTCGTGATTGGTCTATTA
TCCTACGTCGTTATTCAAGACTTCCCTCACAATGCAAAGTTTCTTTCTGAAACAGAACGTGTCTTCATCATCCGA
CGTCTACAAAGCGACAATAAACTAAGTGCTGGTGGTGGCGAGACTTATCGATTCGCACATGTAAAGAAGAGTTTG
AAAGATTGGAAGACCTGGTTTGCCATGGCCATATACATGGGTTTCGACGGGCCTCTATATGCATTTTCGCTCTTC
ACTCCTTCTATCATCAACCAGTTAGGTTTCACTGCAACCAAAGCAAACTTACTTTCAGTCCCTGTTTATGCATGG
GGCTGTTTGGTGACCGTCGCCATTGGCTTTTGGGCGGATCGGTTGGGCAAAAGGTGCCTTGTGAATATCGGCTTG
TTCGGTACTGGATTAGTAGGATATATCATCTTGATCTGCTCCAGAACTCCTGCTCTATCGTATTTTGCGGTCTTC
CTCGCTATCTCTTCCATTTTCCCGACAGTCCCGAACTCGGTAACATGGGTGGCCAGCAATGTCGAGGGCTCCTAC
AAACGAGCTGTAACGTTAGGCGTGGCTATAGGATTTGGCAATCTGAACGGAGCTGTGACATCTAATATTTATCGA
GCAAAAGACCAACCATGGTATCGACTCGGCCATGCAATTGTCTTGGGATACATCATCATAGGAATTATCAGCTCT
TTGTTATTTGCATATTTCCTACGTCGAGAGAACATCAAGCGCGATCGCGGAGAAAGAGATGAAGTGATCGAAGCG
TCGAGGCTGCGAAGATGGATAAGGGTGACGATTGGAGCGGATTCCGGTACACTATCTAGCGAAACTATTACTTCA
TTCATGCAATATATTGCCTCCAAACGACAGTGA
Transcript >AgabiH97|009760
ATGTCTGCCAAAAACGAAGTTCATGACGAAATCAACAGCCACAAAGAGGATCAAAAATATGTACACGAGGAAGAG
CTATATCAACCAGAAGTTGATACTTCTGGCATCGATGAAAAGAAGCTGATGCGGAAGGTGGACTGGAACGTCATA
CCATGGCTTGCCCTATTGTATCTTCTCAATTCCCTGGACCGAGGAAACATCGGGAACGCCAAACTATACAGCTTG
GAGCATGACTTGAGAATGAGCGACAAACAATATCTCCTAGCTTTGACTCTGTTCTTCTTTCCATATTCACTATTC
GAGCCGGCAAGCAATGTTGCGTTGCGAAGACTTAAGCCTTCGACATGGCTATCTTCAATGTTGGTACTATGGGGA
ATTGTAATGACAATGCATGGAGTAGTTAATAATTATGCAGGACTGGTTGCTTTACGGCTTTTACTTGGACTGTGC
GAGGCCGGACTATACCCTGGGATCGCTTTCTATATCACTAGTTGGTACAAGAGTTCAGAAATGGGGACGAAATTT
GCACTATTTTTCTCGTCAGCCACAATCGCTGGTGCCTTCAGCGGCCTGCTGGCAGCTGCAATTGCCAATATGGAT
GGAGTTGGAAATAAACCAGCCTGGGCTTGGATTTTTATCTTGGAGGGCCTTTTCACCGTCGTGATTGGTCTATTA
TCCTACGTCGTTATTCAAGACTTCCCTCACAATGCAAAGTTTCTTTCTGAAACAGAACGTGTCTTCATCATCCGA
CGTCTACAAAGCGACAATAAACTAAGTGCTGGTGGTGGCGAGACTTATCGATTCGCACATGTAAAGAAGAGTTTG
AAAGATTGGAAGACCTGGTTTGCCATGGCCATATACATGGGTTTCGACGGGCCTCTATATGCATTTTCGCTCTTC
ACTCCTTCTATCATCAACCAGTTAGGTTTCACTGCAACCAAAGCAAACTTACTTTCAGTCCCTGTTTATGCATGG
GGCTGTTTGGTGACCGTCGCCATTGGCTTTTGGGCGGATCGGTTGGGCAAAAGGTGCCTTGTGAATATCGGCTTG
TTCGGTACTGGATTAGTAGGATATATCATCTTGATCTGCTCCAGAACTCCTGCTCTATCGTATTTTGCGGTCTTC
CTCGCTATCTCTTCCATTTTCCCGACAGTCCCGAACTCGGTAACATGGGTGGCCAGCAATGTCGAGGGCTCCTAC
AAACGAGCTGTAACGTTAGGCGTGGCTATAGGATTTGGCAATCTGAACGGAGCTGTGACATCTAATATTTATCGA
GCAAAAGACCAACCATGGTATCGACTCGGCCATGCAATTGTCTTGGGATACATCATCATAGGAATTATCAGCTCT
TTGTTATTTGCATATTTCCTACGTCGAGAGAACATCAAGCGCGATCGCGGAGAAAGAGATGAAGTGATCGAAGCG
TCGAGGCTGCGAAGATGGATAAGGGTGACGATTGGAGCGGATTCCGGTACACTATCTAGCGAAACTATTACTTCA
TTCATGCAATATATTGCCTCCAAACGACAGTGA
Gene >AgabiH97|009760
ATGTCTGCCAAAAACGAAGTTCATGACGAAATCAACAGCCACAAAGAGGATCAAAAATATGTACACGAGGAAGAG
CTATATCAACCAGAAGTTGATACTTCTGGCATCGATGAAAAGAAGCTGATGCGGAAGGTGGACTGGAACGTCATA
CCATGGCTTGCCCTATTGTATCTTCTCAATTCCCTGGACCGAGGAAACATCGGGAACGCCAAAGTGCGTCAGTGG
CCCTGTCTTATGTTCATCTAGTTCACCGTCTATGTTTTCGCCAGCTATACAGCTTGGAGCATGACTTGAGAATGA
GCGACAAACAATATCTCCTAGCTTTGACTCTGTTCTTCTTTCCATATTCACTATTCGAGGTATGTCAGGAGCCAT
TCCCAGTTGGGTTTCTTCTCACTTCAAAGCTGAAGCCGGCAAGCAATGTTGCGTTGCGAAGACTTAAGCCTTCGA
CATGGCTATCTTCAATGTTGGTACTATGGGGAATTGTAATGGTTGGTTGCCAAATCATCCACAAGACGCTCCGCT
AAAATTATGACAGACAATGCATGGAGTAGTTAATAATTATGCAGGACTGGTTGGTGAGTCATGCTACGAATTACC
AGTGTACGTCTAATAATGTTCGTTCATTCTTAGCTTTACGGCTTTTACTTGGACTGTGCGAGGCCGGACTATACC
CTGGGATCGCTTTCTATATCACTAGGTTGGTCGACGGTTCGGATCTTCTTTGGTAATTAAATCTGACATCATTGC
AGTTGGTACAAGAGTTCAGAAATGGGGACGAAATTTGCACTATTTTTCTCGTCAGCCACAATCGCTGGTGCCTTC
AGTGAATCAATTCATTTGTTCTACCATATGGACGATCTGACTGGACGACAGGCGGCCTGCTGGCAGCTGCAATTG
CCAATATGGATGGAGTTGGAAATAAACCAGGTTTGTCGTTACAGTAATACGACGCAGCAATAGTGATACTCACTT
CTATTACAGCCTGGGCTTGGATTTTTATCTTGGAGGGCCTTTTCACCGTCGTGATTGGTCTATTATCCTACGTCG
TTATTCAAGACTTCCCTCACAATGCAAAGTTTCTTTCTGAAACAGAACGTATGTCCTTTACCTAGGTATAGAAAG
GGCCTCGAATGGCATAACAACTGATTGTAAAGGTGTCTTCATCATCCGACGTCTACAAAGCGACAATAAACTAAG
TGCTGGTGGTGGCGAGACTTATCGATTCGCACATGTAAAGAAGAGTTTGAAAGATTGGAAGACCTGGTTTGCCAG
TAGGTGCATTTCATAAACATGTCAACTTGGTCGTTTACCCGGTACGTTTAGTGGCCATATACATGGGTTTGTAAG
TATGTTCAAGTATAGCCCTTCGCAATGCTTAATCTCGTGAATACAAGCGACGGGCCTCTATATGCATTTTCGCTC
TTCACTCCTTCTATCATCAACCAGTTAGGTTAGCGTAGATGCTGTCGGCTCAGCAATTATCCTAGTGAAACTCAT
TCTACTCGATTCTAGGTTTCACTGCAACCAAAGCAAACTTACTTTCAGTCCCTGTTTATGCATGGGGCTGTTTGG
TGACCGTCGCCATTGGCTTTTGGGCGGATCGGTTGGGCAAAAGGTGCCTTGTGAATATGTGAGCGTCAATCACCC
ACCTTTTTCGTTTTCCATATCCTCATTGCTCTTCGATAGCGGCTTGTTCGGTACTGGATTAGTAGGATATATCAT
CTTGATCTGCTCCAGAACTCCTGCTCTATCGTATTTTGCGGTCTTCCTCGCTATCTCGTAAGTGAACTAGTTACT
GTCTTTCAACTTTCTCCATTTTCTCAACGTGATCTACCACGCAGTTCCATTTTCCCGACAGTCCGTAAGTGCATG
AAATATCGCCACTTTTTCGGTCTTTTCATATTTTCGGTGTTTTAATCTCTAGCGAACTCGGTAACATGGGTGGCC
AGCAATGTCGAGGGCTCCTACAAACGAGCTGTAACGTTAGGCGTGGCTATAGGATTTGGCAATCTGAACGGAGCT
GTGACATCTAATATTGTAGGCAATCTTTTTCCAACCCGTCCGTTTCAATCGCCTCTTACCACATCACAACAGTAT
CGAGCAAAAGACCAACCATGGTATCGACTCGGCCATGCAATTGTCTTGGGATACATCATCATAGGAATTATCAGC
TCTTTGTTATTTGCATATTTCCTACGTCGAGAGAACATCAAGCGCGATCGCGGAGAAAGAGATGAAGTGATCGAA
GGTATCGATAATCCCAACGCGCGAAAATCAAATGGTGTATACCCTAGCGTCGAGGCTGCGAAGATGGATAAGGGT
GACGATTGGAGCGGATTCCGGTACACTATCTAGCGAAACTATTACGTGCGTAAACATGTTGGTGATGATCGATGA
TCTATGGGCAACCTTACCTACACCTATAAGTTCATTCATGCAATATATTGCCTCCAAACGACAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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