Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|009310
Gene name
Locationscaffold_1:2193313..2195300
Strand-
Gene length (bp)1987
Transcript length (bp)1422
Coding sequence length (bp)1422
Protein length (aa) 474

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 25 0.45

Transmembrane Domains

Domain # Start End Length
1 260 282 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|009310
MELLRHSFWIQTYLFWHAAALVTAEYLPPLEQSFYFDWNAPGQPYPIPVTAQCEVIHITWGRGTATGPNPTAPYY
LQVYTSAFLVPFVISVGNVLQYDWAVPFSPGTLYQICMFDKNGHTGGCQDVYTVIPSNGSPSCANVTFPSPLDVE
ATVENGPLSQFGWIEQCTDIALMPQNGKPPYTMTIAPSLHPPFNITGDGTKPLNWTVSLSWASSFFVSVVDSAGS
VWSNGLLHSAAGRSNACLAGVSVSPHRKDVVGIAVGAGFGGLGVGLVVGLLGTLGFFRRRSKKTGSMGSQIALRG
SRPNTPQGGFATNSLHHTTHSANNRVANARSGSEYYIEPFVMPPRSATSSTQADPVSTSASTPLLAPESTTQADE
HGRMRSKVYVVHHDNGRAPVTVYAQEGTSVVELPPGYPGDATEPSRSLHSSGYDALDEGSASSARARSENVAGRT
EVSSQTASSVLQRSRRPGQILKP*
Coding >AgabiH97|009310
ATGGAGCTTCTTCGACACAGTTTTTGGATACAAACTTATCTCTTCTGGCACGCGGCTGCACTCGTGACAGCCGAG
TATCTTCCTCCCCTGGAACAATCCTTCTATTTCGATTGGAATGCACCGGGTCAACCTTATCCTATACCTGTCACC
GCTCAATGTGAGGTTATTCATATCACTTGGGGAAGGGGTACCGCGACAGGTCCAAATCCCACTGCACCGTACTAT
CTTCAGGTATACACCTCAGCTTTTCTTGTTCCATTTGTCATTTCCGTCGGGAATGTATTACAATACGATTGGGCG
GTCCCTTTCTCCCCTGGAACCTTGTATCAAATATGTATGTTTGACAAAAACGGCCATACGGGTGGATGTCAAGAT
GTATACACCGTGATCCCCAGCAACGGCTCCCCATCGTGCGCGAACGTCACCTTTCCAAGCCCTTTGGACGTAGAG
GCTACAGTCGAAAATGGACCTCTGTCACAATTTGGCTGGATCGAACAGTGCACCGATATAGCGCTTATGCCACAG
AATGGCAAACCACCTTACACGATGACAATTGCCCCATCACTGCACCCTCCGTTCAATATCACAGGTGACGGAACT
AAGCCGCTCAATTGGACTGTGAGCCTATCATGGGCCTCGTCATTCTTTGTTAGCGTTGTCGATTCGGCTGGTAGT
GTCTGGTCCAATGGACTGCTGCATAGCGCAGCAGGCCGGTCGAACGCCTGTCTTGCTGGTGTGTCTGTCAGTCCT
CACCGCAAGGATGTCGTAGGTATTGCAGTTGGTGCAGGTTTCGGTGGTCTAGGTGTTGGCCTTGTCGTGGGTCTG
CTGGGTACCTTAGGTTTCTTTCGCCGTCGTAGCAAGAAAACTGGATCTATGGGCTCCCAAATAGCCCTTCGGGGC
TCCCGTCCGAATACGCCCCAAGGAGGCTTCGCGACCAATTCGTTGCACCACACAACACACTCGGCCAACAATCGC
GTAGCGAATGCGCGAAGTGGCTCAGAGTACTATATTGAGCCATTTGTCATGCCTCCGCGATCGGCGACCTCTTCC
ACACAAGCTGACCCAGTCAGTACCTCTGCGAGCACGCCGCTACTGGCACCTGAGAGCACGACACAAGCAGACGAG
CATGGTAGAATGCGAAGTAAAGTTTATGTCGTCCACCATGACAACGGGCGGGCTCCTGTTACCGTATATGCACAA
GAGGGTACCTCAGTCGTCGAGCTGCCACCAGGGTATCCAGGAGATGCAACGGAGCCTTCACGGAGTCTCCATTCG
TCTGGATACGATGCGCTGGATGAAGGAAGTGCGAGCTCAGCAAGGGCGAGGAGTGAGAATGTCGCAGGCAGGACG
GAAGTCTCTAGTCAAACAGCATCTTCTGTTCTACAGCGATCCAGGAGACCGGGTCAGATTCTCAAACCATAG
Transcript >AgabiH97|009310
ATGGAGCTTCTTCGACACAGTTTTTGGATACAAACTTATCTCTTCTGGCACGCGGCTGCACTCGTGACAGCCGAG
TATCTTCCTCCCCTGGAACAATCCTTCTATTTCGATTGGAATGCACCGGGTCAACCTTATCCTATACCTGTCACC
GCTCAATGTGAGGTTATTCATATCACTTGGGGAAGGGGTACCGCGACAGGTCCAAATCCCACTGCACCGTACTAT
CTTCAGGTATACACCTCAGCTTTTCTTGTTCCATTTGTCATTTCCGTCGGGAATGTATTACAATACGATTGGGCG
GTCCCTTTCTCCCCTGGAACCTTGTATCAAATATGTATGTTTGACAAAAACGGCCATACGGGTGGATGTCAAGAT
GTATACACCGTGATCCCCAGCAACGGCTCCCCATCGTGCGCGAACGTCACCTTTCCAAGCCCTTTGGACGTAGAG
GCTACAGTCGAAAATGGACCTCTGTCACAATTTGGCTGGATCGAACAGTGCACCGATATAGCGCTTATGCCACAG
AATGGCAAACCACCTTACACGATGACAATTGCCCCATCACTGCACCCTCCGTTCAATATCACAGGTGACGGAACT
AAGCCGCTCAATTGGACTGTGAGCCTATCATGGGCCTCGTCATTCTTTGTTAGCGTTGTCGATTCGGCTGGTAGT
GTCTGGTCCAATGGACTGCTGCATAGCGCAGCAGGCCGGTCGAACGCCTGTCTTGCTGGTGTGTCTGTCAGTCCT
CACCGCAAGGATGTCGTAGGTATTGCAGTTGGTGCAGGTTTCGGTGGTCTAGGTGTTGGCCTTGTCGTGGGTCTG
CTGGGTACCTTAGGTTTCTTTCGCCGTCGTAGCAAGAAAACTGGATCTATGGGCTCCCAAATAGCCCTTCGGGGC
TCCCGTCCGAATACGCCCCAAGGAGGCTTCGCGACCAATTCGTTGCACCACACAACACACTCGGCCAACAATCGC
GTAGCGAATGCGCGAAGTGGCTCAGAGTACTATATTGAGCCATTTGTCATGCCTCCGCGATCGGCGACCTCTTCC
ACACAAGCTGACCCAGTCAGTACCTCTGCGAGCACGCCGCTACTGGCACCTGAGAGCACGACACAAGCAGACGAG
CATGGTAGAATGCGAAGTAAAGTTTATGTCGTCCACCATGACAACGGGCGGGCTCCTGTTACCGTATATGCACAA
GAGGGTACCTCAGTCGTCGAGCTGCCACCAGGGTATCCAGGAGATGCAACGGAGCCTTCACGGAGTCTCCATTCG
TCTGGATACGATGCGCTGGATGAAGGAAGTGCGAGCTCAGCAAGGGCGAGGAGTGAGAATGTCGCAGGCAGGACG
GAAGTCTCTAGTCAAACAGCATCTTCTGTTCTACAGCGATCCAGGAGACCGGGTCAGATTCTCAAACCATAG
Gene >AgabiH97|009310
ATGGAGCTTCTTCGACACAGTTTTTGGATACAAACTTATCTCTTCTGGCACGCGGCTGCACTCGTGACAGCCGAG
TATCTTCCTCCCCTGGAACAAGTGCTGTTTTTTTCTAACTTTCAGTTATCAATGCTGATTTTCATCATAACCAAA
CCAGTCCTTCTATTTCGATTGGAATGCACCGGGTCAACCTTATCCTATACCTGTCACCGGTACGAGCATGCTGAA
ATCCAGCAGATTTCAAACTCAAAAATACGCAGCTCAATGTGAGGTTATTCATATCACTTGGGGAAGGGGTACCGC
GACAGGGTATGGTTTACCTTTTTTGTATGTTGATGATCACGATCAACGCTTCGTAGTCCAAATCCCACTGCACCG
TACTATCTTCAGGTATACACCTCGTGCGTGTTGCGTCTTCCTTGTGTTCGTGCTCCATTCACACTTTGATAGAGC
TTTTCTTGTTCCATTTGTCATTTCCGTCGGGAATGTATTACAATACGTGTGTCCGCTCATGCTCGAATCTTAACA
TGGCCTAATATCACTAGTAGGATTGGGCGGTCCCTTTCTCCCCTGGAACCTTGGTAAGTGTTGATAATCCCACTA
TAGATCCCTAGGCTAAGTCACCTTATCAGTATCAAATATGTATGGTAAGATGCCTGCAGCTATTACACCATAATC
TTTTCACATCCTTCTTTGAAGTTTGACAAAAACGGCCATACGGGTGGATGTCAAGATGTATACACCGTGATCCCC
AGCAACGGCTCCCCATCGTGCGCGAACGTCACCTTTCCAAGCCCTTTGGACGTAGAGGCTACAGTCGAAAATGGA
CCTCTGTCACAATTTGGCTGGATCGAACAGGCATGTATTTCGCACATGAGAAAATGTGCTCTAAATTGATAGCCT
CAGTGCACCGATATAGCGCTTATGCCACAGAATGGCAAACCACCTTACACGATGACAGTACGCTCGTTGAGCCAT
TTCATCGAGTCAATCGTGACATGAACCTTTCTAGATTGCCCCATCACTGCACCCTCCGTTCAATATCACAGGTGA
CGGAACTAAGCCGCTCAATTGGACTGTGAGCCTATCATGGGCCTCGTCATTCTTTGTTAGCGTTGTCGATTCGGC
TGGTAGTGTCTGGTCCAATGGACTGCTGCATAGCGCAGCAGGCCGGTCGAACGCCTGTCTTGCTGGTGTGTCTGT
CAGGTACGTCCTATTCGCCCGATTAACGTGAGTCTCATAGTAATTTTTTCCCCAGTCCTCACCGCAAGGATGTCG
TAGGTATTGCAGTTGGTGCAGGTTTCGGTGGTCTAGGTGTTGGCCTTGTCGTGGGTCTGCTGGGTACCTTAGGTT
TCTTTCGCCGTCGTAGCAAGAAAACTGGATCTATGGGCTCCCAAATAGCCCTTCGGGGCTCCCGTCCGAATACGC
CCCAAGGAGGTGTGTGTATCCTGCTATTGTCCGTCACTACTCGCTTCTCAATTCAAATTCCACAGGCTTCGCGAC
CAATTCGTTGCACCACACAACACACTCGGCCAACAATCGCGTAGCGAATGCGCGAAGTGGCTCAGAGTACTATAT
TGAGCCATTTGTCATGCCTCCGCGATCGGCGACCTCTTCCACACAAGCTGACCCAGTCAGTACCTCTGCGAGCAC
GCCGCTACTGGCACCTGAGAGCACGACACAAGCAGACGAGCATGGTAGAATGCGAAGTAAAGTTTATGTCGTCCA
CCATGACAACGGGCGGGCTCCTGTTACCGTATATGCACAAGAGGGTACCTCAGTCGTCGAGCTGCCACCAGGGTA
TCCAGGAGATGCAACGGAGCCTTCACGGAGTCTCCATTCGTCTGGATACGATGCGCTGGATGAAGGAAGTGCGAG
CTCAGCAAGGGCGAGGAGTGAGAATGTCGCAGGCAGGACGGAAGTCTCTAGTCAAACAGCATCTTCTGTTCTACA
GCGATCCAGGAGACCGGGTCAGATTCTCAAACCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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