Protein ID | AgabiH97|008920 |
Gene name | |
Location | scaffold_1:2097969..2099637 |
Strand | - |
Gene length (bp) | 1668 |
Transcript length (bp) | 1389 |
Coding sequence length (bp) | 1389 |
Protein length (aa) | 463 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 20 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Casing | Casing mycelium | 26.46 | 14.79 | 38.13 |
Initials | Initials knots | 23.04 | 12.78 | 33.31 |
Pileal_Stipeal_center | Stage I stipe center | 6.87 | 3.10 | 10.64 |
Pileal_Stipeal_shell | Stage I stipe shell | 3.03 | 1.19 | 4.87 |
DIF_stipe_center | Stage II stipe center | 2.96 | 1.22 | 4.70 |
DIF_stipe_shell | Stage II stipe shell | 4.28 | 1.87 | 6.69 |
DIF_stipe_skin | Stage II stipe skin | 6.36 | 2.82 | 9.90 |
DIF_cap_skin | Stage II cap skin | 1.46 | 0.50 | 2.41 |
DIF_cap_tissue | Stage II cap tissue | 1.80 | 0.57 | 3.04 |
DIF_gill_tissue | Stage II gill tissue | 2.09 | 0.78 | 3.41 |
YFB_stipe_center | Young fruiting body stipe center | 56.25 | 22.90 | 89.60 |
YFB_stipe_shell | Young fruiting body stipe shell | 8.30 | 3.53 | 13.06 |
YFB_stipe_skin | Young fruiting body stipe skin | 5.82 | 2.60 | 9.03 |
YFB_cap_skin | Young fruiting body cap skin | 1.45 | 0.51 | 2.40 |
YFB_cap_tissue | Young fruiting body cap tissue | 0.71 | 0.16 | 1.26 |
YFB_gill_tissue | Young fruiting body gill tissue | 2.09 | 0.81 | 3.37 |
YFB_veil | Young fruiting body veil | 2.57 | 1.04 | 4.10 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Casing | DIF_gill_tissue | 0.000613 | yes |
Casing | YFB_stipe_center | 0.021322 | yes |
Casing | YFB_stipe_shell | 0.001140 | yes |
Casing | YFB_stipe_skin | 0.000613 | yes |
Casing | YFB_cap_skin | 0.000613 | yes |
Casing | YFB_cap_tissue | 0.000613 | yes |
Casing | YFB_gill_tissue | 0.000613 | yes |
Casing | YFB_veil | 0.000613 | yes |
Casing | Initials | 0.771994 | no |
Casing | Pileal_Stipeal_center | 0.000613 | yes |
Casing | Pileal_Stipeal_shell | 0.000613 | yes |
Casing | DIF_stipe_center | 0.000613 | yes |
Casing | DIF_stipe_shell | 0.000613 | yes |
Casing | DIF_stipe_skin | 0.000613 | yes |
Casing | DIF_cap_skin | 0.000613 | yes |
Casing | DIF_cap_tissue | 0.000613 | yes |
DIF_gill_tissue | YFB_stipe_center | 0.000613 | yes |
DIF_gill_tissue | YFB_stipe_shell | 0.000613 | yes |
DIF_gill_tissue | YFB_stipe_skin | 0.009773 | yes |
DIF_gill_tissue | YFB_cap_skin | 0.525018 | no |
DIF_gill_tissue | YFB_cap_tissue | 0.022369 | yes |
DIF_gill_tissue | YFB_gill_tissue | 0.996078 | no |
DIF_gill_tissue | YFB_veil | 0.757433 | no |
YFB_stipe_center | YFB_stipe_shell | 0.000613 | yes |
YFB_stipe_center | YFB_stipe_skin | 0.000613 | yes |
YFB_stipe_center | YFB_cap_skin | 0.000613 | yes |
YFB_stipe_center | YFB_cap_tissue | 0.000613 | yes |
YFB_stipe_center | YFB_gill_tissue | 0.000613 | yes |
YFB_stipe_center | YFB_veil | 0.000613 | yes |
YFB_stipe_shell | YFB_stipe_skin | 0.432990 | no |
YFB_stipe_shell | YFB_cap_skin | 0.000613 | yes |
YFB_stipe_shell | YFB_cap_tissue | 0.000613 | yes |
YFB_stipe_shell | YFB_gill_tissue | 0.000613 | yes |
YFB_stipe_shell | YFB_veil | 0.000613 | yes |
YFB_stipe_skin | YFB_cap_skin | 0.000613 | yes |
YFB_stipe_skin | YFB_cap_tissue | 0.000613 | yes |
YFB_stipe_skin | YFB_gill_tissue | 0.004160 | yes |
YFB_stipe_skin | YFB_veil | 0.032978 | yes |
YFB_cap_skin | YFB_cap_tissue | 0.159859 | no |
YFB_cap_skin | YFB_gill_tissue | 0.508639 | no |
YFB_cap_skin | YFB_veil | 0.220912 | no |
YFB_cap_tissue | YFB_gill_tissue | 0.016669 | yes |
YFB_cap_tissue | YFB_veil | 0.003765 | yes |
YFB_gill_tissue | YFB_veil | 0.750817 | no |
Initials | DIF_gill_tissue | 0.000613 | yes |
Initials | YFB_stipe_center | 0.007439 | yes |
Initials | YFB_stipe_shell | 0.002084 | yes |
Initials | YFB_stipe_skin | 0.000613 | yes |
Initials | YFB_cap_skin | 0.000613 | yes |
Initials | YFB_cap_tissue | 0.000613 | yes |
Initials | YFB_gill_tissue | 0.000613 | yes |
Initials | YFB_veil | 0.000613 | yes |
Initials | Pileal_Stipeal_center | 0.000613 | yes |
Initials | Pileal_Stipeal_shell | 0.000613 | yes |
Initials | DIF_stipe_center | 0.000613 | yes |
Initials | DIF_stipe_shell | 0.000613 | yes |
Initials | DIF_stipe_skin | 0.000613 | yes |
Initials | DIF_cap_skin | 0.000613 | yes |
Initials | DIF_cap_tissue | 0.000613 | yes |
Pileal_Stipeal_center | DIF_gill_tissue | 0.001140 | yes |
Pileal_Stipeal_center | YFB_stipe_center | 0.000613 | yes |
Pileal_Stipeal_center | YFB_stipe_shell | 0.745186 | no |
Pileal_Stipeal_center | YFB_stipe_skin | 0.783101 | no |
Pileal_Stipeal_center | YFB_cap_skin | 0.000613 | yes |
Pileal_Stipeal_center | YFB_cap_tissue | 0.000613 | yes |
Pileal_Stipeal_center | YFB_gill_tissue | 0.000613 | yes |
Pileal_Stipeal_center | YFB_veil | 0.007092 | yes |
Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.035993 | yes |
Pileal_Stipeal_center | DIF_stipe_center | 0.026461 | yes |
Pileal_Stipeal_center | DIF_stipe_shell | 0.273446 | no |
Pileal_Stipeal_center | DIF_stipe_skin | 0.914013 | no |
Pileal_Stipeal_center | DIF_cap_skin | 0.000613 | yes |
Pileal_Stipeal_center | DIF_cap_tissue | 0.001140 | yes |
Pileal_Stipeal_shell | DIF_gill_tissue | 0.507062 | no |
Pileal_Stipeal_shell | YFB_stipe_center | 0.000613 | yes |
Pileal_Stipeal_shell | YFB_stipe_shell | 0.012274 | yes |
Pileal_Stipeal_shell | YFB_stipe_skin | 0.121880 | no |
Pileal_Stipeal_shell | YFB_cap_skin | 0.098442 | no |
Pileal_Stipeal_shell | YFB_cap_tissue | 0.001625 | yes |
Pileal_Stipeal_shell | YFB_gill_tissue | 0.492314 | no |
Pileal_Stipeal_shell | YFB_veil | 0.814939 | no |
Pileal_Stipeal_shell | DIF_stipe_center | 0.978566 | no |
Pileal_Stipeal_shell | DIF_stipe_shell | 0.514242 | no |
Pileal_Stipeal_shell | DIF_stipe_skin | 0.068270 | no |
Pileal_Stipeal_shell | DIF_cap_skin | 0.096624 | no |
Pileal_Stipeal_shell | DIF_cap_tissue | 0.308159 | no |
DIF_stipe_center | DIF_gill_tissue | 0.529397 | no |
DIF_stipe_center | YFB_stipe_center | 0.000613 | yes |
DIF_stipe_center | YFB_stipe_shell | 0.004548 | yes |
DIF_stipe_center | YFB_stipe_skin | 0.090496 | no |
DIF_stipe_center | YFB_cap_skin | 0.099595 | no |
DIF_stipe_center | YFB_cap_tissue | 0.002525 | yes |
DIF_stipe_center | YFB_gill_tissue | 0.515837 | no |
DIF_stipe_center | YFB_veil | 0.841172 | no |
DIF_stipe_center | DIF_stipe_shell | 0.463307 | no |
DIF_stipe_center | DIF_stipe_skin | 0.049257 | yes |
DIF_stipe_center | DIF_cap_skin | 0.098609 | no |
DIF_stipe_center | DIF_cap_tissue | 0.323160 | no |
DIF_stipe_shell | DIF_gill_tissue | 0.096296 | no |
DIF_stipe_shell | YFB_stipe_center | 0.000613 | yes |
DIF_stipe_shell | YFB_stipe_shell | 0.085898 | no |
DIF_stipe_shell | YFB_stipe_skin | 0.533046 | no |
DIF_stipe_shell | YFB_cap_skin | 0.006742 | yes |
DIF_stipe_shell | YFB_cap_tissue | 0.000613 | yes |
DIF_stipe_shell | YFB_gill_tissue | 0.077879 | no |
DIF_stipe_shell | YFB_veil | 0.252939 | no |
DIF_stipe_shell | DIF_stipe_skin | 0.386575 | no |
DIF_stipe_shell | DIF_cap_skin | 0.004548 | yes |
DIF_stipe_shell | DIF_cap_tissue | 0.037593 | yes |
DIF_stipe_skin | DIF_gill_tissue | 0.002525 | yes |
DIF_stipe_skin | YFB_stipe_center | 0.000613 | yes |
DIF_stipe_skin | YFB_stipe_shell | 0.597253 | no |
DIF_stipe_skin | YFB_stipe_skin | 0.894002 | no |
DIF_stipe_skin | YFB_cap_skin | 0.000613 | yes |
DIF_stipe_skin | YFB_cap_tissue | 0.000613 | yes |
DIF_stipe_skin | YFB_gill_tissue | 0.001625 | yes |
DIF_stipe_skin | YFB_veil | 0.013186 | yes |
DIF_stipe_skin | DIF_cap_skin | 0.000613 | yes |
DIF_stipe_skin | DIF_cap_tissue | 0.001625 | yes |
DIF_cap_skin | DIF_gill_tissue | 0.519590 | no |
DIF_cap_skin | YFB_stipe_center | 0.000613 | yes |
DIF_cap_skin | YFB_stipe_shell | 0.000613 | yes |
DIF_cap_skin | YFB_stipe_skin | 0.000613 | yes |
DIF_cap_skin | YFB_cap_skin | 0.994991 | no |
DIF_cap_skin | YFB_cap_tissue | 0.155441 | no |
DIF_cap_skin | YFB_gill_tissue | 0.504198 | no |
DIF_cap_skin | YFB_veil | 0.223485 | no |
DIF_cap_skin | DIF_cap_tissue | 0.755490 | no |
DIF_cap_tissue | DIF_gill_tissue | 0.848746 | no |
DIF_cap_tissue | YFB_stipe_center | 0.000613 | yes |
DIF_cap_tissue | YFB_stipe_shell | 0.000613 | yes |
DIF_cap_tissue | YFB_stipe_skin | 0.003765 | yes |
DIF_cap_tissue | YFB_cap_skin | 0.756179 | no |
DIF_cap_tissue | YFB_cap_tissue | 0.051723 | no |
DIF_cap_tissue | YFB_gill_tissue | 0.844077 | no |
DIF_cap_tissue | YFB_veil | 0.533287 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >AgabiH97|008920 MMQLRSALLTLALVLAVSSHPTLDRRASFTLKNGQDAIALNQKFSKLTANSPCQSGENACVDQKFAQCIGGKFVL QACGPGTTCSALPLVNSPGTSITCTTEADAAARIAATGAQSAGGNTGNNSGSEDNNDDAGGAAGDDSDTGNDGGA NNAGDGGAAGNDNNTGNNGGANNAGGGAAGNDNNTGNDGGANNAGGGAAGNDNNTGNNGGANNAGGGAAGNDNDT DNNGGANNAGGGGAAGNNDNSDPQKSSTLDPDVIAKGFANDGQDVPVDGQVASLTSTNNFINFCKDINLPITNGE QKTGGSCNPTPMGAIPSTSVMPSSKFVFPKNGGTVPANKKFTLKMAIKNVDTGNFVNAQSNYYAAPQHLNAQGII IGHSHVVVEKLDSMTQTTPTDPNVFAFFKGVNGKADAQGVLNVDVDKGLPAGTYKLSSINAAANHQPVLVAVAQH GSLDDVVYFTVQ* |
Coding | >AgabiH97|008920 ATGATGCAACTGCGTTCTGCTCTTCTGACCCTGGCACTTGTTCTTGCAGTATCTTCTCATCCCACTCTGGATCGT CGTGCTTCCTTCACTCTCAAGAATGGTCAAGATGCAATTGCATTAAATCAAAAGTTTAGCAAGCTTACTGCCAAC TCCCCCTGCCAGTCGGGGGAAAACGCTTGTGTAGACCAAAAGTTTGCCCAGTGTATCGGCGGGAAATTTGTCCTT CAAGCATGTGGCCCGGGCACGACTTGTTCAGCACTGCCTCTTGTCAATTCACCAGGAACATCTATTACTTGCACC ACAGAAGCTGATGCAGCTGCTCGCATCGCCGCGACTGGTGCCCAATCTGCCGGCGGCAACACTGGAAATAATTCC GGGTCTGAAGATAATAATGATGATGCCGGTGGTGCTGCCGGAGATGACAGCGATACTGGTAACGATGGGGGAGCG AACAACGCTGGTGACGGTGGCGCAGCCGGGAATGATAACAACACAGGCAACAACGGCGGGGCTAATAACGCTGGT GGTGGCGCAGCCGGGAATGATAACAACACGGGCAACGATGGAGGGGCTAATAACGCTGGTGGCGGCGCAGCCGGG AATGATAACAACACAGGCAACAATGGCGGGGCCAATAACGCTGGTGGCGGCGCAGCTGGGAATGATAACGATACC GACAACAATGGTGGTGCTAACAACGCTGGTGGCGGTGGTGCAGCTGGAAACAACGACAACAGTGACCCACAAAAG TCATCAACTCTGGACCCTGATGTCATCGCCAAAGGATTCGCGAATGATGGTCAAGATGTTCCCGTTGACGGCCAA GTCGCCTCCCTCACCTCAACCAATAACTTTATCAACTTTTGCAAGGACATAAATCTGCCGATTACCAACGGTGAA CAGAAGACTGGTGGGTCATGTAACCCAACACCAATGGGAGCTATTCCTTCCACTTCCGTTATGCCATCGTCAAAA TTTGTTTTCCCCAAGAACGGAGGCACTGTTCCCGCAAACAAAAAATTTACCCTTAAAATGGCGATCAAGAACGTG GACACGGGGAACTTTGTGAATGCTCAGAGCAATTATTACGCTGCACCACAGCATTTGAATGCTCAGGGTATAATC ATAGGACACTCACATGTGGTCGTTGAGAAGCTCGATTCAATGACCCAGACGACACCAACCGACCCGAATGTTTTC GCCTTCTTCAAGGGTGTGAATGGCAAAGCTGATGCCCAGGGAGTTTTGAATGTGGATGTTGACAAAGGTTTACCT GCTGGGACCTACAAGCTTTCGTCCATCAACGCTGCGGCCAATCACCAGCCCGTCCTTGTGGCAGTCGCTCAGCAC GGATCTCTTGATGACGTTGTCTATTTTACCGTCCAATAA |
Transcript | >AgabiH97|008920 ATGATGCAACTGCGTTCTGCTCTTCTGACCCTGGCACTTGTTCTTGCAGTATCTTCTCATCCCACTCTGGATCGT CGTGCTTCCTTCACTCTCAAGAATGGTCAAGATGCAATTGCATTAAATCAAAAGTTTAGCAAGCTTACTGCCAAC TCCCCCTGCCAGTCGGGGGAAAACGCTTGTGTAGACCAAAAGTTTGCCCAGTGTATCGGCGGGAAATTTGTCCTT CAAGCATGTGGCCCGGGCACGACTTGTTCAGCACTGCCTCTTGTCAATTCACCAGGAACATCTATTACTTGCACC ACAGAAGCTGATGCAGCTGCTCGCATCGCCGCGACTGGTGCCCAATCTGCCGGCGGCAACACTGGAAATAATTCC GGGTCTGAAGATAATAATGATGATGCCGGTGGTGCTGCCGGAGATGACAGCGATACTGGTAACGATGGGGGAGCG AACAACGCTGGTGACGGTGGCGCAGCCGGGAATGATAACAACACAGGCAACAACGGCGGGGCTAATAACGCTGGT GGTGGCGCAGCCGGGAATGATAACAACACGGGCAACGATGGAGGGGCTAATAACGCTGGTGGCGGCGCAGCCGGG AATGATAACAACACAGGCAACAATGGCGGGGCCAATAACGCTGGTGGCGGCGCAGCTGGGAATGATAACGATACC GACAACAATGGTGGTGCTAACAACGCTGGTGGCGGTGGTGCAGCTGGAAACAACGACAACAGTGACCCACAAAAG TCATCAACTCTGGACCCTGATGTCATCGCCAAAGGATTCGCGAATGATGGTCAAGATGTTCCCGTTGACGGCCAA GTCGCCTCCCTCACCTCAACCAATAACTTTATCAACTTTTGCAAGGACATAAATCTGCCGATTACCAACGGTGAA CAGAAGACTGGTGGGTCATGTAACCCAACACCAATGGGAGCTATTCCTTCCACTTCCGTTATGCCATCGTCAAAA TTTGTTTTCCCCAAGAACGGAGGCACTGTTCCCGCAAACAAAAAATTTACCCTTAAAATGGCGATCAAGAACGTG GACACGGGGAACTTTGTGAATGCTCAGAGCAATTATTACGCTGCACCACAGCATTTGAATGCTCAGGGTATAATC ATAGGACACTCACATGTGGTCGTTGAGAAGCTCGATTCAATGACCCAGACGACACCAACCGACCCGAATGTTTTC GCCTTCTTCAAGGGTGTGAATGGCAAAGCTGATGCCCAGGGAGTTTTGAATGTGGATGTTGACAAAGGTTTACCT GCTGGGACCTACAAGCTTTCGTCCATCAACGCTGCGGCCAATCACCAGCCCGTCCTTGTGGCAGTCGCTCAGCAC GGATCTCTTGATGACGTTGTCTATTTTACCGTCCAATAA |
Gene | >AgabiH97|008920 ATGATGCAACTGCGTTCTGCTCTTCTGACCCTGGCACTTGTTCTTGCAGTATCTTCTCATCCCACTCTGGATCGT CGTGCTTCCTTCACTCTCAAGAATGGTCAAGATGCAATTGCATTAAAGTATGTCCCATTTATCTACCGTCCCTGC CTAATCTAATTATTGCTTCCAGTCAAAAGTTTAGCAAGCTTACTGCCAACTCCCCCTGCCAGTCGGGGGAAAACG CTTGTGTAGACCAAAAGTTTGCCCAGTGTATCGGCGGGAAATTTGTCCTTCAAGCATGTGGCCCGGGCACGACGT AAGCATTCAAATCTTTTTGGAAAGATGTTTGTCTTTATAATAAACCAACCTTTGACAGTTGTTCAGCACTGCCTC TTGTCAATTCACCAGGAACATCTATTACTTGCACCACAGAAGCTGATGCAGCTGCTCGCATCGCCGCGGTGAGTT GATCCAAGTAATCTGCCACTTTTCCAAACTTCTGATGATCCAATCTGTAGACTGGTGCCCAATCTGCCGGCGGCA ACACTGGAAATAATTCCGGGTCTGAAGATAATAATGATGATGCCGGTGGTGCTGCCGGAGATGACAGCGATACTG GTAACGATGGGGGAGCGAACAACGCTGGTGACGGTGGCGCAGCCGGGAATGATAACAACACAGGCAACAACGGCG GGGCTAATAACGCTGGTGGTGGCGCAGCCGGGAATGATAACAACACGGGCAACGATGGAGGGGCTAATAACGCTG GTGGCGGCGCAGCCGGGAATGATAACAACACAGGCAACAATGGCGGGGCCAATAACGCTGGTGGCGGCGCAGCTG GGAATGATAACGATACCGACAACAATGGTGGTGCTAACAACGCTGGTGGCGGTGGTGCAGCTGGAAACAACGACA ACAGTGACCCACAAAAGTCATCAAGTATGTCTACAAACCATTTCCAATGATCAAAACAAGTGACTAACTGGGTGA TATCAGCTCTGGACCCTGATGTCATCGCCAAAGGATTCGCGAATGATGGTCAAGATGTTCCCGTTGACGGCCAAG TCGCCTCCCTCACCTCAACCAATAACTTTATCAACTTTTGCAAGGACATAAATCTGCCGATTACCAACGGTGAAC AGAAGACTGGTGGGTCATGTAACCCAACACCAATGGGAGCTATTCCTTCCACTTCCGTTATGCCATCGTCAAAAT TTGTTTTCCCCAAGAACGGAGGCACTGTTCCCGCAAACAAAAAATTTACCCTTAAAATGGCGATCAAGAACGTGG ACACGGGGAACTTTGTGAATGCTCAGAGCAATTATTACGCTGCACCACAGCATTTGAATGCTCAGGGTATAATCA TAGGACACTCACATGTGGTCGTTGAGAAGCTCGATTCAATGACCCAGACGACACCAACCGACCCGAATGTTTTCG CCTTCTTCAAGGGTGTGAATGGCAAAGCTGATGCCCAGGGAGTTTTGAATGTGGATGTTGACAAAGGTTTACCTG CTGGGACCTACAAGCTTTCGTCCATCAACGCTGCGGCCAATCACCAGCCCGTCCTTGTGGCAGTCGCTCAGCACG GATCTCTTGATGACGTTGTCTATGTAAGTCGCCACTCCACTTGTTTTTTTAATAGTTTGATACTCAAGTCGATGC CAGTTTACCGTCCAATAA |