Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|008450
Gene name
Locationscaffold_1:1997414..1998598
Strand+
Gene length (bp)1184
Transcript length (bp)822
Coding sequence length (bp)822
Protein length (aa) 274

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01145 Band_7 SPFH domain / Band 7 family 1.4E-25 27 215

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9P7H3|PHB1_SCHPO Prohibitin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=phb1 PE=3 SV=1 8 269 1.0E-131
sp|P40961|PHB1_YEAST Prohibitin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHB1 PE=1 SV=2 8 260 9.0E-129
sp|Q54GI9|PHB1_DICDI Prohibitin-1, mitochondrial OS=Dictyostelium discoideum GN=phbA PE=3 SV=1 2 269 8.0E-112
sp|P84173|PHB_CHICK Prohibitin OS=Gallus gallus GN=PHB PE=1 SV=1 14 270 1.0E-107
sp|P67779|PHB_RAT Prohibitin OS=Rattus norvegicus GN=Phb PE=1 SV=1 14 270 3.0E-107
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Swissprot ID Swissprot Description Start End E-value
sp|Q9P7H3|PHB1_SCHPO Prohibitin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=phb1 PE=3 SV=1 8 269 1.0E-131
sp|P40961|PHB1_YEAST Prohibitin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHB1 PE=1 SV=2 8 260 9.0E-129
sp|Q54GI9|PHB1_DICDI Prohibitin-1, mitochondrial OS=Dictyostelium discoideum GN=phbA PE=3 SV=1 2 269 8.0E-112
sp|P84173|PHB_CHICK Prohibitin OS=Gallus gallus GN=PHB PE=1 SV=1 14 270 1.0E-107
sp|P67779|PHB_RAT Prohibitin OS=Rattus norvegicus GN=Phb PE=1 SV=1 14 270 3.0E-107
sp|P67778|PHB_MOUSE Prohibitin OS=Mus musculus GN=Phb PE=1 SV=1 14 270 3.0E-107
sp|P35232|PHB_HUMAN Prohibitin OS=Homo sapiens GN=PHB PE=1 SV=1 14 270 1.0E-106
sp|Q3T165|PHB_BOVIN Prohibitin OS=Bos taurus GN=PHB PE=2 SV=1 14 270 1.0E-106
sp|Q9LK25|PHB4_ARATH Prohibitin-4, mitochondrial OS=Arabidopsis thaliana GN=PHB4 PE=1 SV=1 1 269 1.0E-105
sp|O04331|PHB3_ARATH Prohibitin-3, mitochondrial OS=Arabidopsis thaliana GN=PHB3 PE=1 SV=1 1 267 2.0E-104
sp|P24156|L2CC_DROME Protein l(2)37Cc OS=Drosophila melanogaster GN=l(2)37Cc PE=2 SV=2 14 272 2.0E-103
sp|Q9BKU4|PHB1_CAEEL Mitochondrial prohibitin complex protein 1 OS=Caenorhabditis elegans GN=phb-1 PE=1 SV=1 12 261 5.0E-99
sp|Q54Q31|PHB2_DICDI Prohibitin-2 OS=Dictyostelium discoideum GN=phbB PE=3 SV=1 23 268 4.0E-96
sp|O49460|PHB1_ARATH Prohibitin-1, mitochondrial OS=Arabidopsis thaliana GN=PHB1 PE=1 SV=1 24 257 9.0E-96
sp|Q9ZNT7|PHB2_ARATH Prohibitin-2, mitochondrial OS=Arabidopsis thaliana GN=PHB2 PE=1 SV=1 15 257 3.0E-93
sp|P50085|PHB2_YEAST Prohibitin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHB2 PE=1 SV=2 21 254 9.0E-93
sp|O94550|PHB2_SCHPO Prohibitin-2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=phb2 PE=1 SV=2 21 261 3.0E-91
sp|Q9SIL6|PHB6_ARATH Prohibitin-6, mitochondrial OS=Arabidopsis thaliana GN=PHB6 PE=1 SV=1 15 257 1.0E-89
sp|Q9FFH5|PHB7_ARATH Prohibitin-7, mitochondrial OS=Arabidopsis thaliana GN=PHB7 PE=1 SV=1 15 261 1.0E-89
sp|O35129|PHB2_MOUSE Prohibitin-2 OS=Mus musculus GN=Phb2 PE=1 SV=1 7 269 3.0E-86
sp|Q99623|PHB2_HUMAN Prohibitin-2 OS=Homo sapiens GN=PHB2 PE=1 SV=2 7 269 3.0E-86
sp|Q5XIH7|PHB2_RAT Prohibitin-2 OS=Rattus norvegicus GN=Phb2 PE=1 SV=1 7 269 4.0E-86
sp|Q5RB19|PHB2_PONAB Prohibitin-2 OS=Pongo abelii GN=PHB2 PE=2 SV=1 7 266 5.0E-86
sp|Q2HJ97|PHB2_BOVIN Prohibitin-2 OS=Bos taurus GN=PHB2 PE=2 SV=1 7 269 3.0E-85
sp|A9UMS3|PHB2_XENTR Prohibitin-2 OS=Xenopus tropicalis GN=phb2 PE=2 SV=1 7 269 1.0E-84
sp|P50093|PHB2_CAEEL Mitochondrial prohibitin complex protein 2 OS=Caenorhabditis elegans GN=phb-2 PE=1 SV=2 24 269 2.0E-83
sp|Q5ZMN3|PHB2_CHICK Prohibitin-2 OS=Gallus gallus GN=PHB2 PE=2 SV=1 21 269 1.0E-81
sp|Q9LY99|PHB5_ARATH Prohibitin-5, mitochondrial OS=Arabidopsis thaliana GN=PHB5 PE=3 SV=1 21 271 6.0E-80
sp|P86220|PHB_MESAU Prohibitin (Fragments) OS=Mesocricetus auratus GN=PHB PE=1 SV=1 82 195 8.0E-16
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|008450
MAFATQASRLIVPLGIAAAVVQASLYDVPGGYRAVMFDRFAGVKSQATGEGTHLLVPWLQRAILYDCRIKPRNIS
TTTGSKDLQMVSITLRVLSRPDVEHLSKIYQSLGMDYDERVLPSIGNEVLKSIVAQFDAAELITQREVVSSRIRA
DLLQRAGEFNIKLEDVSITHLTFGKEFTQAVEAKQIAQQDAERAKFIVEKAEQERQAAVIRAEGEAEAASTISRA
LDKAGDAFVALRKIEASKAIVQSLANNPNVTYIPSSGGGVLLNVPTNK*
Coding >AgabiH97|008450
ATGGCTTTTGCAACTCAAGCTAGCAGACTAATAGTACCTCTGGGGATTGCTGCTGCCGTTGTACAAGCAAGTCTT
TATGATGTTCCGGGAGGCTACCGTGCAGTTATGTTCGATCGTTTCGCCGGTGTGAAGAGCCAGGCAACGGGAGAA
GGTACACATCTTCTCGTCCCCTGGTTACAACGCGCTATTCTCTATGACTGTCGTATTAAGCCTCGAAATATTTCT
ACTACCACTGGATCCAAAGACCTGCAAATGGTGTCCATCACCTTGCGTGTTCTGTCAAGGCCCGACGTTGAGCAT
CTTTCCAAAATTTACCAAAGTCTCGGCATGGATTATGACGAGAGGGTATTACCTTCTATCGGTAACGAAGTCTTG
AAGAGCATTGTTGCCCAGTTTGATGCTGCCGAGCTTATTACGCAGCGTGAAGTGGTTTCTTCTCGTATTCGTGCC
GACCTTCTGCAACGTGCTGGAGAGTTCAACATCAAGTTGGAGGACGTCTCCATAACTCACCTTACGTTCGGCAAG
GAATTTACTCAAGCCGTTGAGGCCAAACAAATTGCACAACAAGATGCCGAACGTGCCAAATTTATCGTTGAAAAG
GCGGAACAAGAACGCCAGGCGGCTGTTATTCGTGCGGAGGGAGAAGCCGAAGCTGCATCGACGATATCGCGTGCA
CTCGACAAGGCTGGGGACGCCTTTGTAGCCCTGAGGAAGATCGAGGCGAGCAAGGCGATTGTACAGTCGCTGGCA
AACAACCCGAACGTGACATATATACCGAGCAGTGGTGGTGGTGTGTTATTGAATGTACCTACGAATAAATAA
Transcript >AgabiH97|008450
ATGGCTTTTGCAACTCAAGCTAGCAGACTAATAGTACCTCTGGGGATTGCTGCTGCCGTTGTACAAGCAAGTCTT
TATGATGTTCCGGGAGGCTACCGTGCAGTTATGTTCGATCGTTTCGCCGGTGTGAAGAGCCAGGCAACGGGAGAA
GGTACACATCTTCTCGTCCCCTGGTTACAACGCGCTATTCTCTATGACTGTCGTATTAAGCCTCGAAATATTTCT
ACTACCACTGGATCCAAAGACCTGCAAATGGTGTCCATCACCTTGCGTGTTCTGTCAAGGCCCGACGTTGAGCAT
CTTTCCAAAATTTACCAAAGTCTCGGCATGGATTATGACGAGAGGGTATTACCTTCTATCGGTAACGAAGTCTTG
AAGAGCATTGTTGCCCAGTTTGATGCTGCCGAGCTTATTACGCAGCGTGAAGTGGTTTCTTCTCGTATTCGTGCC
GACCTTCTGCAACGTGCTGGAGAGTTCAACATCAAGTTGGAGGACGTCTCCATAACTCACCTTACGTTCGGCAAG
GAATTTACTCAAGCCGTTGAGGCCAAACAAATTGCACAACAAGATGCCGAACGTGCCAAATTTATCGTTGAAAAG
GCGGAACAAGAACGCCAGGCGGCTGTTATTCGTGCGGAGGGAGAAGCCGAAGCTGCATCGACGATATCGCGTGCA
CTCGACAAGGCTGGGGACGCCTTTGTAGCCCTGAGGAAGATCGAGGCGAGCAAGGCGATTGTACAGTCGCTGGCA
AACAACCCGAACGTGACATATATACCGAGCAGTGGTGGTGGTGTGTTATTGAATGTACCTACGAATAAATAA
Gene >AgabiH97|008450
ATGGCTTTTGCAACTCAAGCTAGCAGACTAATAGGTCGGTGTTCTAGTGATATGTATTAACTATTCTTGCTCACA
TAAACTCAGTACCTCTGGGGATTGCTGCTGCCGTTGTACAAGCAAGTCTTTATGATGTTCCGGGAGGCTACCGTG
CAGTTATGTTCGATCGTTTCGCCGGTGTGAAGAGCCAGGTATTTTTCCGCTGAAAATGTTGCTACTTCTAACATA
CTGACTGCAAGGCTTAGGCAACGGGAGAAGGTACACATCTTCTCGTCCCCTGGTTACAACGCGCTATTCTCTATG
ACTGTCGTATTAAGCCTCGAGTAAGTGGGTTTTCCATTTTGAGGTCTTGAAAGCGTTTACAGTATTCGTAGAATA
TTTCTACTACCACTGGATCCAAAGACCTGCAAATGGTGTCCATCACCTTGCGTGTTCTGTCAAGGCCCGACGTTG
AGCATCTTTCCAAAATTTACCAAAGTCTCGGCATGGATTATGACGAGAGGGTATTACCTTCTATCGGTAACGAAG
TCTTGAAGAGCATTGTTGCCCAGTTTGATGCTGCCGAGCTTATTACGCAGCGTGAAGTGGTGAGTAGAGTCACTT
TTCGTGTCGTCCATAACTCGGTTGATGTTATAATCAGGTTTCTTCTCGTATTCGTGCCGACCTTCTGCAACGTGC
TGGAGAGTTCAACATCAAGTTGGAGGACGTCTCCATAACTCACCTTACGTTCGGCAAGGTTTGTCCTACATGACT
TGGCCGACGTACTTTGGGACTAACACAAGGTCTAGGAATTTACTCAAGCCGTTGAGGCCAAACAAATTGCACAAC
AAGGTAAACAGACTCGGTCGACTGCACGTTACAGAAGCTCAAAAGATATTGATAGATGCCGAACGTGCCAAATTT
ATCGTTGAAAAGGTAAGTCAGAGGACTAGATTCCGAGCGTGCACTTATCCGCTGTTAAATAGGCGGAACAAGAAC
GCCAGGCGGCTGTTATTCGTGCGGAGGGAGAAGCCGAAGCTGCATCGACGATATCGCGTGCACTCGACAAGGCTG
GGGACGCCTTTGTAGCCCTGAGGAAGATCGAGGCGAGCAAGGCGATTGTACAGTCGCTGGCAAACAACCCGAACG
TGACATATATACCGAGCAGTGGTGGTGGTGTGTTATTGAATGTACCTACGAATAAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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