© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|007740 |
| Gene name | |
| Location | scaffold_1:1832005..1833497 |
| Strand | - |
| Gene length (bp) | 1492 |
| Transcript length (bp) | 1119 |
| Coding sequence length (bp) | 1119 |
| Protein length (aa) | 373 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D4B3I5|A3024_ARTBC | Extracellular serine-rich protein ARB_03024 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03024 PE=1 SV=1 | 22 | 129 | 8.0E-11 |
| sp|P0DN32|CUPR1_ARTBC | Probable GPI-anchored cupredoxin ARB_05732-1 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05732-1 PE=1 SV=1 | 1 | 129 | 6.0E-10 |
| sp|P0DN32|CUPR1_ARTBC | Probable GPI-anchored cupredoxin ARB_05732-1 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05732-1 PE=1 SV=1 | 210 | 309 | 1.0E-08 |
| sp|D4B3I5|A3024_ARTBC | Extracellular serine-rich protein ARB_03024 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03024 PE=1 SV=1 | 210 | 328 | 2.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 19 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Casing | Casing mycelium | 1177.17 | 412.74 | 1941.61 |
| Initials | Initials knots | 421.74 | 232.27 | 611.21 |
| Pileal_Stipeal_center | Stage I stipe center | 470.78 | 238.24 | 703.31 |
| Pileal_Stipeal_shell | Stage I stipe shell | 347.57 | 196.54 | 498.61 |
| DIF_stipe_center | Stage II stipe center | 254.19 | 146.62 | 361.76 |
| DIF_stipe_shell | Stage II stipe shell | 284.08 | 161.04 | 407.11 |
| DIF_stipe_skin | Stage II stipe skin | 425.26 | 219.89 | 630.63 |
| DIF_cap_skin | Stage II cap skin | 472.33 | 256.18 | 688.48 |
| DIF_cap_tissue | Stage II cap tissue | 480.91 | 259.23 | 702.59 |
| DIF_gill_tissue | Stage II gill tissue | 406.82 | 224.00 | 589.65 |
| YFB_stipe_center | Young fruiting body stipe center | 526.78 | 260.99 | 792.56 |
| YFB_stipe_shell | Young fruiting body stipe shell | 305.03 | 173.54 | 436.52 |
| YFB_stipe_skin | Young fruiting body stipe skin | 712.74 | 342.02 | 1083.46 |
| YFB_cap_skin | Young fruiting body cap skin | 446.07 | 243.63 | 648.51 |
| YFB_cap_tissue | Young fruiting body cap tissue | 680.05 | 347.22 | 1012.88 |
| YFB_gill_tissue | Young fruiting body gill tissue | 293.50 | 162.95 | 424.04 |
| YFB_veil | Young fruiting body veil | 362.09 | 200.22 | 523.97 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Casing | DIF_gill_tissue | 0.006742 | yes |
| Casing | YFB_stipe_center | 0.041164 | yes |
| Casing | YFB_stipe_shell | 0.000613 | yes |
| Casing | YFB_stipe_skin | 0.261343 | no |
| Casing | YFB_cap_skin | 0.011041 | yes |
| Casing | YFB_cap_tissue | 0.189511 | no |
| Casing | YFB_gill_tissue | 0.000613 | yes |
| Casing | YFB_veil | 0.003365 | yes |
| Casing | Initials | 0.007782 | yes |
| Casing | Pileal_Stipeal_center | 0.018344 | yes |
| Casing | Pileal_Stipeal_shell | 0.002525 | yes |
| Casing | DIF_stipe_center | 0.000613 | yes |
| Casing | DIF_stipe_shell | 0.000613 | yes |
| Casing | DIF_stipe_skin | 0.008457 | yes |
| Casing | DIF_cap_skin | 0.017226 | yes |
| Casing | DIF_cap_tissue | 0.021056 | yes |
| DIF_gill_tissue | YFB_stipe_center | 0.542972 | no |
| DIF_gill_tissue | YFB_stipe_shell | 0.429397 | no |
| DIF_gill_tissue | YFB_stipe_skin | 0.105702 | no |
| DIF_gill_tissue | YFB_cap_skin | 0.864074 | no |
| DIF_gill_tissue | YFB_cap_tissue | 0.123805 | no |
| DIF_gill_tissue | YFB_gill_tissue | 0.363211 | no |
| DIF_gill_tissue | YFB_veil | 0.815588 | no |
| YFB_stipe_center | YFB_stipe_shell | 0.092841 | no |
| YFB_stipe_center | YFB_stipe_skin | 0.507902 | no |
| YFB_stipe_center | YFB_cap_skin | 0.741202 | no |
| YFB_stipe_center | YFB_cap_tissue | 0.582696 | no |
| YFB_stipe_center | YFB_gill_tissue | 0.073043 | no |
| YFB_stipe_center | YFB_veil | 0.310199 | no |
| YFB_stipe_shell | YFB_stipe_skin | 0.009123 | yes |
| YFB_stipe_shell | YFB_cap_skin | 0.256555 | no |
| YFB_stipe_shell | YFB_cap_tissue | 0.010412 | yes |
| YFB_stipe_shell | YFB_gill_tissue | 0.948135 | no |
| YFB_stipe_shell | YFB_veil | 0.698740 | no |
| YFB_stipe_skin | YFB_cap_skin | 0.188653 | no |
| YFB_stipe_skin | YFB_cap_tissue | 0.948047 | no |
| YFB_stipe_skin | YFB_gill_tissue | 0.006032 | yes |
| YFB_stipe_skin | YFB_veil | 0.035993 | yes |
| YFB_cap_skin | YFB_cap_tissue | 0.236791 | no |
| YFB_cap_skin | YFB_gill_tissue | 0.201033 | no |
| YFB_cap_skin | YFB_veil | 0.620893 | no |
| YFB_cap_tissue | YFB_gill_tissue | 0.007439 | yes |
| YFB_cap_tissue | YFB_veil | 0.045060 | yes |
| YFB_gill_tissue | YFB_veil | 0.609752 | no |
| Initials | DIF_gill_tissue | 0.952460 | no |
| Initials | YFB_stipe_center | 0.626936 | no |
| Initials | YFB_stipe_shell | 0.359090 | no |
| Initials | YFB_stipe_skin | 0.137864 | no |
| Initials | YFB_cap_skin | 0.923737 | no |
| Initials | YFB_cap_tissue | 0.164492 | no |
| Initials | YFB_gill_tissue | 0.296798 | no |
| Initials | YFB_veil | 0.746261 | no |
| Initials | Pileal_Stipeal_center | 0.841940 | no |
| Initials | Pileal_Stipeal_shell | 0.649307 | no |
| Initials | DIF_stipe_center | 0.092330 | no |
| Initials | DIF_stipe_shell | 0.227041 | no |
| Initials | DIF_stipe_skin | 0.989150 | no |
| Initials | DIF_cap_skin | 0.825878 | no |
| Initials | DIF_cap_tissue | 0.797884 | no |
| Pileal_Stipeal_center | DIF_gill_tissue | 0.775991 | no |
| Pileal_Stipeal_center | YFB_stipe_center | 0.848435 | no |
| Pileal_Stipeal_center | YFB_stipe_shell | 0.210433 | no |
| Pileal_Stipeal_center | YFB_stipe_skin | 0.300978 | no |
| Pileal_Stipeal_center | YFB_cap_skin | 0.932378 | no |
| Pileal_Stipeal_center | YFB_cap_tissue | 0.356456 | no |
| Pileal_Stipeal_center | YFB_gill_tissue | 0.161964 | no |
| Pileal_Stipeal_center | YFB_veil | 0.526281 | no |
| Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.430967 | no |
| Pileal_Stipeal_center | DIF_stipe_center | 0.048626 | yes |
| Pileal_Stipeal_center | DIF_stipe_shell | 0.119910 | no |
| Pileal_Stipeal_center | DIF_stipe_skin | 0.860488 | no |
| Pileal_Stipeal_center | DIF_cap_skin | 0.995692 | no |
| Pileal_Stipeal_center | DIF_cap_tissue | 0.974498 | no |
| Pileal_Stipeal_shell | DIF_gill_tissue | 0.728845 | no |
| Pileal_Stipeal_shell | YFB_stipe_center | 0.232528 | no |
| Pileal_Stipeal_shell | YFB_stipe_shell | 0.778073 | no |
| Pileal_Stipeal_shell | YFB_stipe_skin | 0.027943 | yes |
| Pileal_Stipeal_shell | YFB_cap_skin | 0.520071 | no |
| Pileal_Stipeal_shell | YFB_cap_tissue | 0.028437 | yes |
| Pileal_Stipeal_shell | YFB_gill_tissue | 0.699220 | no |
| Pileal_Stipeal_shell | YFB_veil | 0.942584 | no |
| Pileal_Stipeal_shell | DIF_stipe_center | 0.351323 | no |
| Pileal_Stipeal_shell | DIF_stipe_shell | 0.618681 | no |
| Pileal_Stipeal_shell | DIF_stipe_skin | 0.640630 | no |
| Pileal_Stipeal_shell | DIF_cap_skin | 0.386890 | no |
| Pileal_Stipeal_shell | DIF_cap_tissue | 0.360784 | no |
| DIF_stipe_center | DIF_gill_tissue | 0.130393 | no |
| DIF_stipe_center | YFB_stipe_center | 0.019169 | yes |
| DIF_stipe_center | YFB_stipe_shell | 0.658968 | no |
| DIF_stipe_center | YFB_stipe_skin | 0.000613 | yes |
| DIF_stipe_center | YFB_cap_skin | 0.055779 | no |
| DIF_stipe_center | YFB_cap_tissue | 0.001140 | yes |
| DIF_stipe_center | YFB_gill_tissue | 0.752814 | no |
| DIF_stipe_center | YFB_veil | 0.284650 | no |
| DIF_stipe_center | DIF_stipe_shell | 0.816978 | no |
| DIF_stipe_center | DIF_stipe_skin | 0.102187 | no |
| DIF_stipe_center | DIF_cap_skin | 0.031800 | yes |
| DIF_stipe_center | DIF_cap_tissue | 0.028918 | yes |
| DIF_stipe_shell | DIF_gill_tissue | 0.290658 | no |
| DIF_stipe_shell | YFB_stipe_center | 0.047373 | yes |
| DIF_stipe_shell | YFB_stipe_shell | 0.895995 | no |
| DIF_stipe_shell | YFB_stipe_skin | 0.003365 | yes |
| DIF_stipe_shell | YFB_cap_skin | 0.148925 | no |
| DIF_stipe_shell | YFB_cap_tissue | 0.005671 | yes |
| DIF_stipe_shell | YFB_gill_tissue | 0.956919 | no |
| DIF_stipe_shell | YFB_veil | 0.531128 | no |
| DIF_stipe_shell | DIF_stipe_skin | 0.223147 | no |
| DIF_stipe_shell | DIF_cap_skin | 0.094821 | no |
| DIF_stipe_shell | DIF_cap_tissue | 0.086914 | no |
| DIF_stipe_skin | DIF_gill_tissue | 0.940787 | no |
| DIF_stipe_skin | YFB_stipe_center | 0.646617 | no |
| DIF_stipe_skin | YFB_stipe_shell | 0.354556 | no |
| DIF_stipe_skin | YFB_stipe_skin | 0.149625 | no |
| DIF_stipe_skin | YFB_cap_skin | 0.936725 | no |
| DIF_stipe_skin | YFB_cap_tissue | 0.180078 | no |
| DIF_stipe_skin | YFB_gill_tissue | 0.292699 | no |
| DIF_stipe_skin | YFB_veil | 0.731975 | no |
| DIF_stipe_skin | DIF_cap_skin | 0.842186 | no |
| DIF_stipe_skin | DIF_cap_tissue | 0.813099 | no |
| DIF_cap_skin | DIF_gill_tissue | 0.755363 | no |
| DIF_cap_skin | YFB_stipe_center | 0.845934 | no |
| DIF_cap_skin | YFB_stipe_shell | 0.167754 | no |
| DIF_cap_skin | YFB_stipe_skin | 0.270160 | no |
| DIF_cap_skin | YFB_cap_skin | 0.922276 | no |
| DIF_cap_skin | YFB_cap_tissue | 0.320818 | no |
| DIF_cap_skin | YFB_gill_tissue | 0.130258 | no |
| DIF_cap_skin | YFB_veil | 0.486632 | no |
| DIF_cap_skin | DIF_cap_tissue | 0.977403 | no |
| DIF_cap_tissue | DIF_gill_tissue | 0.725159 | no |
| DIF_cap_tissue | YFB_stipe_center | 0.877533 | no |
| DIF_cap_tissue | YFB_stipe_shell | 0.160907 | no |
| DIF_cap_tissue | YFB_stipe_skin | 0.315681 | no |
| DIF_cap_tissue | YFB_cap_skin | 0.896068 | no |
| DIF_cap_tissue | YFB_cap_tissue | 0.370745 | no |
| DIF_cap_tissue | YFB_gill_tissue | 0.122473 | no |
| DIF_cap_tissue | YFB_veil | 0.458582 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|007740 MFALPLSLGLALLPFASAAVHDIQVGAEGKLQFWPEAIAAQPGDQVVFHFASKNHTATQSSFADPCGHSEGGFDS GFMPVAANQTDSLPTFAFTVEDTKAVWVYCKQKVPVGHCGKGMVFSVNCPPDGDPNSFTNFKKSALAIGAAEASA APPAAPPAAPSADSGSAPAGYGGYGGGYGDSGAPAPSSSDPAPAASASASTSASGAVHTVIVGESGSLAFNPPSI QAKPSDTVIFEFRDKNHTVTQSSFADPCTKGASGFDSGFMPVANPAGPFPTWKLTVNDTTPIWAYCRQQVPKSHC GTGMVFAINAVEDGPKNFTAFQNVAKALSGGASAGSAVSGDSNTADTNSALSIHLSPVTVTAMVSVAVALLL* |
| Coding | >AgabiH97|007740 ATGTTTGCTCTTCCTCTCTCTTTGGGCCTGGCGCTTCTGCCCTTTGCTTCTGCTGCTGTTCATGATATTCAAGTT GGTGCTGAGGGAAAGCTACAGTTCTGGCCAGAGGCCATTGCTGCCCAACCAGGTGATCAGGTCGTCTTCCATTTT GCCTCCAAGAACCACACCGCCACACAATCTTCCTTTGCCGATCCCTGTGGACACAGTGAAGGTGGTTTTGACTCG GGATTTATGCCCGTTGCCGCCAACCAGACGGACAGCCTCCCTACCTTTGCTTTTACCGTCGAAGACACAAAAGCA GTCTGGGTTTACTGTAAGCAGAAAGTGCCAGTTGGTCACTGCGGGAAAGGCATGGTCTTTTCCGTCAACTGTCCA CCCGATGGCGATCCAAATTCTTTCACAAACTTCAAGAAGTCTGCACTTGCTATTGGTGCTGCTGAGGCTAGCGCA GCTCCCCCCGCAGCTCCCCCCGCAGCTCCCAGCGCTGACTCTGGATCAGCCCCTGCCGGATATGGTGGGTATGGC GGTGGATATGGGGATTCCGGTGCCCCAGCCCCAAGTTCCTCGGACCCAGCTCCAGCAGCTTCAGCCTCTGCTTCA ACTTCAGCTTCAGGCGCCGTTCACACCGTCATCGTCGGCGAATCCGGATCACTTGCCTTCAACCCACCCAGCATC CAGGCCAAGCCCAGTGATACCGTGATCTTTGAATTCCGTGACAAAAACCATACTGTTACTCAATCATCATTTGCC GACCCCTGTACCAAGGGCGCCTCTGGATTTGACTCTGGATTTATGCCTGTCGCAAATCCCGCCGGACCTTTCCCC ACCTGGAAATTAACTGTCAATGATACCACACCTATCTGGGCCTATTGTCGCCAACAGGTCCCCAAGAGCCACTGT GGGACTGGAATGGTCTTCGCCATTAATGCAGTTGAGGACGGTCCAAAGAACTTTACCGCTTTCCAAAACGTGGCC AAGGCGTTAAGTGGGGGTGCTAGTGCAGGTAGCGCAGTTTCGGGAGACTCCAACACTGCAGACACAAACTCTGCG CTGTCCATCCACCTCAGTCCAGTAACTGTCACTGCCATGGTATCTGTTGCTGTTGCTCTCCTTCTTTAA |
| Transcript | >AgabiH97|007740 ATGTTTGCTCTTCCTCTCTCTTTGGGCCTGGCGCTTCTGCCCTTTGCTTCTGCTGCTGTTCATGATATTCAAGTT GGTGCTGAGGGAAAGCTACAGTTCTGGCCAGAGGCCATTGCTGCCCAACCAGGTGATCAGGTCGTCTTCCATTTT GCCTCCAAGAACCACACCGCCACACAATCTTCCTTTGCCGATCCCTGTGGACACAGTGAAGGTGGTTTTGACTCG GGATTTATGCCCGTTGCCGCCAACCAGACGGACAGCCTCCCTACCTTTGCTTTTACCGTCGAAGACACAAAAGCA GTCTGGGTTTACTGTAAGCAGAAAGTGCCAGTTGGTCACTGCGGGAAAGGCATGGTCTTTTCCGTCAACTGTCCA CCCGATGGCGATCCAAATTCTTTCACAAACTTCAAGAAGTCTGCACTTGCTATTGGTGCTGCTGAGGCTAGCGCA GCTCCCCCCGCAGCTCCCCCCGCAGCTCCCAGCGCTGACTCTGGATCAGCCCCTGCCGGATATGGTGGGTATGGC GGTGGATATGGGGATTCCGGTGCCCCAGCCCCAAGTTCCTCGGACCCAGCTCCAGCAGCTTCAGCCTCTGCTTCA ACTTCAGCTTCAGGCGCCGTTCACACCGTCATCGTCGGCGAATCCGGATCACTTGCCTTCAACCCACCCAGCATC CAGGCCAAGCCCAGTGATACCGTGATCTTTGAATTCCGTGACAAAAACCATACTGTTACTCAATCATCATTTGCC GACCCCTGTACCAAGGGCGCCTCTGGATTTGACTCTGGATTTATGCCTGTCGCAAATCCCGCCGGACCTTTCCCC ACCTGGAAATTAACTGTCAATGATACCACACCTATCTGGGCCTATTGTCGCCAACAGGTCCCCAAGAGCCACTGT GGGACTGGAATGGTCTTCGCCATTAATGCAGTTGAGGACGGTCCAAAGAACTTTACCGCTTTCCAAAACGTGGCC AAGGCGTTAAGTGGGGGTGCTAGTGCAGGTAGCGCAGTTTCGGGAGACTCCAACACTGCAGACACAAACTCTGCG CTGTCCATCCACCTCAGTCCAGTAACTGTCACTGCCATGGTATCTGTTGCTGTTGCTCTCCTTCTTTAA |
| Gene | >AgabiH97|007740 ATGTTTGCTCTTCCTCTCTCTTTGGGCCTGGCGCTTCTGCCCTTTGCTTCTGCTGCTGTTCATGATATTCAAGTT GGTGCTGAGGGAAAGCTACAGTTCTGGCCAGAGGCCATTGTGAGTCTTGCTAATTGGCCCCTTTGTGAAGCGCAT CCTCATGCGTACCTATTAGGCTGCCCAACCAGGTGATCAGGTCGTCTTCCATTTTGCCTCCAAGAACCACACCGC CACACAATCTTCCTTTGCCGATCCCTGTGGACACAGTGAAGGTGGTTTTGACTCGGGATTGTAAGTATCTACCTC TTCGAATACCTCTTTAATTCACAATTTTTCTAGTATGCCCGTTGCCGCCAACCAGACGGACAGCCTCCCTACCTT TGCTTTTACCGTCGAAGACGTGCGTGATGCTTCTGAAAATAACCCTTGATATTTATTCTGACTTTGCCAAAAAGA CAAAAGCAGTCTGGGTTTACTGTAAGCAGAAAGTGCCAGTTGGTCACTGCGGGAAAGGCATGGTCTTTTCCGTCA ACTGTCCACCCGATGGCGATCCAAATTCTTTCACAAACTTCAAGAAGTCTGCACTTGCTATTGGTGCTGCTGAGG CTAGCGCAGCTCCCCCCGCAGCTCCCCCCGCAGCTCCCAGCGCTGACTCTGGATCAGCCCCTGCCGGATATGGTG GGTATGGCGGTGGATATGGGGATTCCGGTGCCCCAGCCCCAAGTTCCTCGGACCCAGCTCCAGCAGCTTCAGCCT CTGCTTCAACTTCAGCTTCAGGCGCCGTTCACACCGTCATCGTCGGCGAATCCGGATCACTTGCCTTCAACCCAC CCAGCATCCAGGCCAAGCCCAGTGATACCGTGATCTTTGAATTGTAATCTCTTCCCCTGTTATCTCGCCCACTGA AATTGATTCATCTTCTACTCATTCTAGCCGTGACAAAAACCATACTGTTACTCAATCATCATTTGCCGACCCCTG TACCAAGGGCGCCTCTGGATTTGACTCTGGATTGTAAGTGCAAGTTCACTCGACTTGTCCGGCAATTTCGCTAAC ATCTTGGTAGTATGCCTGTCGCAAATCCCGCCGGACCTTTCCCCACCTGGAAATTAACTGTCAATGATACCACAC CTATCTGGGCCTATGTGAGCACTGACTATTGCCGTTTTCTCGTGTATCAAACTGATCATTTCCATTAGTGTCGCC AACAGGTCCCCAAGAGCCACTGTGGGACTGGAATGGTCTTGTAAGTCATTCTCTGTTTACTTCGTACTTTACTCT AAAACGCAATTTTAGCGCCATTAATGCAGTTGAGGACGGTCCAAAGAACTTTACCGCTTTCCAAAACGTGGCCAA GGCGTTAAGTGGGGGTGCTAGTGCAGGTAGCGCAGTTTCGGGAGACTCCAACACTGCAGACACAAACTCTGCGCT GTCCATCCACCTCAGTCCAGTAACTGTCACTGCCATGGTATCTGTTGCTGTTGCTCTCCTTCTTTAA |