Fungal Genomics

General Properties

Protein ID	AgabiH97|007740
Gene name
Location	scaffold_1:1832005..1833497
Strand	-
Gene length (bp)	1492
Transcript length (bp)	1119
Coding sequence length (bp)	1119
Protein length (aa)	373

Overview

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PFAM Domains

(None)

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp|D4B3I5|A3024_ARTBC	Extracellular serine-rich protein ARB_03024 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03024 PE=1 SV=1	22	129	8.0E-11
sp|P0DN32|CUPR1_ARTBC	Probable GPI-anchored cupredoxin ARB_05732-1 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05732-1 PE=1 SV=1	1	129	6.0E-10
sp|P0DN32|CUPR1_ARTBC	Probable GPI-anchored cupredoxin ARB_05732-1 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05732-1 PE=1 SV=1	210	309	1.0E-08
sp|D4B3I5|A3024_ARTBC	Extracellular serine-rich protein ARB_03024 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03024 PE=1 SV=1	210	328	2.0E-06

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Extracellular		0.0953	0.0403	0.647	0.4158	0.1126	0.0108	0.3294	0.2268	0.148	0.0047

SignalP

SignalP signal predicted	Location	Score
Yes	1 - 18	0.999736

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Orthologs

Orthofinder run ID	1
Orthogroup	657
Change Orthofinder run	1: Agaricomycetes 5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|007740
Agaricus bisporus var bisporus H97	AgabiH97|007740 (this protein)
Rhodonia placenta FPRL280	RhoplFPRL280|2_120
Rhodonia placenta FPRL280	RhoplFPRL280|3_44

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97|007740 MFALPLSLGLALLPFASAAVHDIQVGAEGKLQFWPEAIAAQPGDQVVFHFASKNHTATQSSFADPCGHSEGGFDS GFMPVAANQTDSLPTFAFTVEDTKAVWVYCKQKVPVGHCGKGMVFSVNCPPDGDPNSFTNFKKSALAIGAAEASA APPAAPPAAPSADSGSAPAGYGGYGGGYGDSGAPAPSSSDPAPAASASASTSASGAVHTVIVGESGSLAFNPPSI QAKPSDTVIFEFRDKNHTVTQSSFADPCTKGASGFDSGFMPVANPAGPFPTWKLTVNDTTPIWAYCRQQVPKSHC GTGMVFAINAVEDGPKNFTAFQNVAKALSGGASAGSAVSGDSNTADTNSALSIHLSPVTVTAMVSVAVALLL*
Coding	>AgabiH97|007740 ATGTTTGCTCTTCCTCTCTCTTTGGGCCTGGCGCTTCTGCCCTTTGCTTCTGCTGCTGTTCATGATATTCAAGTT GGTGCTGAGGGAAAGCTACAGTTCTGGCCAGAGGCCATTGCTGCCCAACCAGGTGATCAGGTCGTCTTCCATTTT GCCTCCAAGAACCACACCGCCACACAATCTTCCTTTGCCGATCCCTGTGGACACAGTGAAGGTGGTTTTGACTCG GGATTTATGCCCGTTGCCGCCAACCAGACGGACAGCCTCCCTACCTTTGCTTTTACCGTCGAAGACACAAAAGCA GTCTGGGTTTACTGTAAGCAGAAAGTGCCAGTTGGTCACTGCGGGAAAGGCATGGTCTTTTCCGTCAACTGTCCA CCCGATGGCGATCCAAATTCTTTCACAAACTTCAAGAAGTCTGCACTTGCTATTGGTGCTGCTGAGGCTAGCGCA GCTCCCCCCGCAGCTCCCCCCGCAGCTCCCAGCGCTGACTCTGGATCAGCCCCTGCCGGATATGGTGGGTATGGC GGTGGATATGGGGATTCCGGTGCCCCAGCCCCAAGTTCCTCGGACCCAGCTCCAGCAGCTTCAGCCTCTGCTTCA ACTTCAGCTTCAGGCGCCGTTCACACCGTCATCGTCGGCGAATCCGGATCACTTGCCTTCAACCCACCCAGCATC CAGGCCAAGCCCAGTGATACCGTGATCTTTGAATTCCGTGACAAAAACCATACTGTTACTCAATCATCATTTGCC GACCCCTGTACCAAGGGCGCCTCTGGATTTGACTCTGGATTTATGCCTGTCGCAAATCCCGCCGGACCTTTCCCC ACCTGGAAATTAACTGTCAATGATACCACACCTATCTGGGCCTATTGTCGCCAACAGGTCCCCAAGAGCCACTGT GGGACTGGAATGGTCTTCGCCATTAATGCAGTTGAGGACGGTCCAAAGAACTTTACCGCTTTCCAAAACGTGGCC AAGGCGTTAAGTGGGGGTGCTAGTGCAGGTAGCGCAGTTTCGGGAGACTCCAACACTGCAGACACAAACTCTGCG CTGTCCATCCACCTCAGTCCAGTAACTGTCACTGCCATGGTATCTGTTGCTGTTGCTCTCCTTCTTTAA
Transcript	>AgabiH97|007740 ATGTTTGCTCTTCCTCTCTCTTTGGGCCTGGCGCTTCTGCCCTTTGCTTCTGCTGCTGTTCATGATATTCAAGTT GGTGCTGAGGGAAAGCTACAGTTCTGGCCAGAGGCCATTGCTGCCCAACCAGGTGATCAGGTCGTCTTCCATTTT GCCTCCAAGAACCACACCGCCACACAATCTTCCTTTGCCGATCCCTGTGGACACAGTGAAGGTGGTTTTGACTCG GGATTTATGCCCGTTGCCGCCAACCAGACGGACAGCCTCCCTACCTTTGCTTTTACCGTCGAAGACACAAAAGCA GTCTGGGTTTACTGTAAGCAGAAAGTGCCAGTTGGTCACTGCGGGAAAGGCATGGTCTTTTCCGTCAACTGTCCA CCCGATGGCGATCCAAATTCTTTCACAAACTTCAAGAAGTCTGCACTTGCTATTGGTGCTGCTGAGGCTAGCGCA GCTCCCCCCGCAGCTCCCCCCGCAGCTCCCAGCGCTGACTCTGGATCAGCCCCTGCCGGATATGGTGGGTATGGC GGTGGATATGGGGATTCCGGTGCCCCAGCCCCAAGTTCCTCGGACCCAGCTCCAGCAGCTTCAGCCTCTGCTTCA ACTTCAGCTTCAGGCGCCGTTCACACCGTCATCGTCGGCGAATCCGGATCACTTGCCTTCAACCCACCCAGCATC CAGGCCAAGCCCAGTGATACCGTGATCTTTGAATTCCGTGACAAAAACCATACTGTTACTCAATCATCATTTGCC GACCCCTGTACCAAGGGCGCCTCTGGATTTGACTCTGGATTTATGCCTGTCGCAAATCCCGCCGGACCTTTCCCC ACCTGGAAATTAACTGTCAATGATACCACACCTATCTGGGCCTATTGTCGCCAACAGGTCCCCAAGAGCCACTGT GGGACTGGAATGGTCTTCGCCATTAATGCAGTTGAGGACGGTCCAAAGAACTTTACCGCTTTCCAAAACGTGGCC AAGGCGTTAAGTGGGGGTGCTAGTGCAGGTAGCGCAGTTTCGGGAGACTCCAACACTGCAGACACAAACTCTGCG CTGTCCATCCACCTCAGTCCAGTAACTGTCACTGCCATGGTATCTGTTGCTGTTGCTCTCCTTCTTTAA
Gene	>AgabiH97|007740 ATGTTTGCTCTTCCTCTCTCTTTGGGCCTGGCGCTTCTGCCCTTTGCTTCTGCTGCTGTTCATGATATTCAAGTT GGTGCTGAGGGAAAGCTACAGTTCTGGCCAGAGGCCATTGTGAGTCTTGCTAATTGGCCCCTTTGTGAAGCGCAT CCTCATGCGTACCTATTAGGCTGCCCAACCAGGTGATCAGGTCGTCTTCCATTTTGCCTCCAAGAACCACACCGC CACACAATCTTCCTTTGCCGATCCCTGTGGACACAGTGAAGGTGGTTTTGACTCGGGATTGTAAGTATCTACCTC TTCGAATACCTCTTTAATTCACAATTTTTCTAGTATGCCCGTTGCCGCCAACCAGACGGACAGCCTCCCTACCTT TGCTTTTACCGTCGAAGACGTGCGTGATGCTTCTGAAAATAACCCTTGATATTTATTCTGACTTTGCCAAAAAGA CAAAAGCAGTCTGGGTTTACTGTAAGCAGAAAGTGCCAGTTGGTCACTGCGGGAAAGGCATGGTCTTTTCCGTCA ACTGTCCACCCGATGGCGATCCAAATTCTTTCACAAACTTCAAGAAGTCTGCACTTGCTATTGGTGCTGCTGAGG CTAGCGCAGCTCCCCCCGCAGCTCCCCCCGCAGCTCCCAGCGCTGACTCTGGATCAGCCCCTGCCGGATATGGTG GGTATGGCGGTGGATATGGGGATTCCGGTGCCCCAGCCCCAAGTTCCTCGGACCCAGCTCCAGCAGCTTCAGCCT CTGCTTCAACTTCAGCTTCAGGCGCCGTTCACACCGTCATCGTCGGCGAATCCGGATCACTTGCCTTCAACCCAC CCAGCATCCAGGCCAAGCCCAGTGATACCGTGATCTTTGAATTGTAATCTCTTCCCCTGTTATCTCGCCCACTGA AATTGATTCATCTTCTACTCATTCTAGCCGTGACAAAAACCATACTGTTACTCAATCATCATTTGCCGACCCCTG TACCAAGGGCGCCTCTGGATTTGACTCTGGATTGTAAGTGCAAGTTCACTCGACTTGTCCGGCAATTTCGCTAAC ATCTTGGTAGTATGCCTGTCGCAAATCCCGCCGGACCTTTCCCCACCTGGAAATTAACTGTCAATGATACCACAC CTATCTGGGCCTATGTGAGCACTGACTATTGCCGTTTTCTCGTGTATCAAACTGATCATTTCCATTAGTGTCGCC AACAGGTCCCCAAGAGCCACTGTGGGACTGGAATGGTCTTGTAAGTCATTCTCTGTTTACTTCGTACTTTACTCT AAAACGCAATTTTAGCGCCATTAATGCAGTTGAGGACGGTCCAAAGAACTTTACCGCTTTCCAAAACGTGGCCAA GGCGTTAAGTGGGGGTGCTAGTGCAGGTAGCGCAGTTTCGGGAGACTCCAACACTGCAGACACAAACTCTGCGCT GTCCATCCACCTCAGTCCAGTAACTGTCACTGCCATGGTATCTGTTGCTGTTGCTCTCCTTCTTTAA