Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|007740
Gene name
Locationscaffold_1:1832005..1833497
Strand-
Gene length (bp)1492
Transcript length (bp)1119
Coding sequence length (bp)1119
Protein length (aa) 373

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|D4B3I5|A3024_ARTBC Extracellular serine-rich protein ARB_03024 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03024 PE=1 SV=1 22 129 8.0E-11
sp|P0DN32|CUPR1_ARTBC Probable GPI-anchored cupredoxin ARB_05732-1 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05732-1 PE=1 SV=1 1 129 6.0E-10
sp|P0DN32|CUPR1_ARTBC Probable GPI-anchored cupredoxin ARB_05732-1 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05732-1 PE=1 SV=1 210 309 1.0E-08
sp|D4B3I5|A3024_ARTBC Extracellular serine-rich protein ARB_03024 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03024 PE=1 SV=1 210 328 2.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|007740
MFALPLSLGLALLPFASAAVHDIQVGAEGKLQFWPEAIAAQPGDQVVFHFASKNHTATQSSFADPCGHSEGGFDS
GFMPVAANQTDSLPTFAFTVEDTKAVWVYCKQKVPVGHCGKGMVFSVNCPPDGDPNSFTNFKKSALAIGAAEASA
APPAAPPAAPSADSGSAPAGYGGYGGGYGDSGAPAPSSSDPAPAASASASTSASGAVHTVIVGESGSLAFNPPSI
QAKPSDTVIFEFRDKNHTVTQSSFADPCTKGASGFDSGFMPVANPAGPFPTWKLTVNDTTPIWAYCRQQVPKSHC
GTGMVFAINAVEDGPKNFTAFQNVAKALSGGASAGSAVSGDSNTADTNSALSIHLSPVTVTAMVSVAVALLL*
Coding >AgabiH97|007740
ATGTTTGCTCTTCCTCTCTCTTTGGGCCTGGCGCTTCTGCCCTTTGCTTCTGCTGCTGTTCATGATATTCAAGTT
GGTGCTGAGGGAAAGCTACAGTTCTGGCCAGAGGCCATTGCTGCCCAACCAGGTGATCAGGTCGTCTTCCATTTT
GCCTCCAAGAACCACACCGCCACACAATCTTCCTTTGCCGATCCCTGTGGACACAGTGAAGGTGGTTTTGACTCG
GGATTTATGCCCGTTGCCGCCAACCAGACGGACAGCCTCCCTACCTTTGCTTTTACCGTCGAAGACACAAAAGCA
GTCTGGGTTTACTGTAAGCAGAAAGTGCCAGTTGGTCACTGCGGGAAAGGCATGGTCTTTTCCGTCAACTGTCCA
CCCGATGGCGATCCAAATTCTTTCACAAACTTCAAGAAGTCTGCACTTGCTATTGGTGCTGCTGAGGCTAGCGCA
GCTCCCCCCGCAGCTCCCCCCGCAGCTCCCAGCGCTGACTCTGGATCAGCCCCTGCCGGATATGGTGGGTATGGC
GGTGGATATGGGGATTCCGGTGCCCCAGCCCCAAGTTCCTCGGACCCAGCTCCAGCAGCTTCAGCCTCTGCTTCA
ACTTCAGCTTCAGGCGCCGTTCACACCGTCATCGTCGGCGAATCCGGATCACTTGCCTTCAACCCACCCAGCATC
CAGGCCAAGCCCAGTGATACCGTGATCTTTGAATTCCGTGACAAAAACCATACTGTTACTCAATCATCATTTGCC
GACCCCTGTACCAAGGGCGCCTCTGGATTTGACTCTGGATTTATGCCTGTCGCAAATCCCGCCGGACCTTTCCCC
ACCTGGAAATTAACTGTCAATGATACCACACCTATCTGGGCCTATTGTCGCCAACAGGTCCCCAAGAGCCACTGT
GGGACTGGAATGGTCTTCGCCATTAATGCAGTTGAGGACGGTCCAAAGAACTTTACCGCTTTCCAAAACGTGGCC
AAGGCGTTAAGTGGGGGTGCTAGTGCAGGTAGCGCAGTTTCGGGAGACTCCAACACTGCAGACACAAACTCTGCG
CTGTCCATCCACCTCAGTCCAGTAACTGTCACTGCCATGGTATCTGTTGCTGTTGCTCTCCTTCTTTAA
Transcript >AgabiH97|007740
ATGTTTGCTCTTCCTCTCTCTTTGGGCCTGGCGCTTCTGCCCTTTGCTTCTGCTGCTGTTCATGATATTCAAGTT
GGTGCTGAGGGAAAGCTACAGTTCTGGCCAGAGGCCATTGCTGCCCAACCAGGTGATCAGGTCGTCTTCCATTTT
GCCTCCAAGAACCACACCGCCACACAATCTTCCTTTGCCGATCCCTGTGGACACAGTGAAGGTGGTTTTGACTCG
GGATTTATGCCCGTTGCCGCCAACCAGACGGACAGCCTCCCTACCTTTGCTTTTACCGTCGAAGACACAAAAGCA
GTCTGGGTTTACTGTAAGCAGAAAGTGCCAGTTGGTCACTGCGGGAAAGGCATGGTCTTTTCCGTCAACTGTCCA
CCCGATGGCGATCCAAATTCTTTCACAAACTTCAAGAAGTCTGCACTTGCTATTGGTGCTGCTGAGGCTAGCGCA
GCTCCCCCCGCAGCTCCCCCCGCAGCTCCCAGCGCTGACTCTGGATCAGCCCCTGCCGGATATGGTGGGTATGGC
GGTGGATATGGGGATTCCGGTGCCCCAGCCCCAAGTTCCTCGGACCCAGCTCCAGCAGCTTCAGCCTCTGCTTCA
ACTTCAGCTTCAGGCGCCGTTCACACCGTCATCGTCGGCGAATCCGGATCACTTGCCTTCAACCCACCCAGCATC
CAGGCCAAGCCCAGTGATACCGTGATCTTTGAATTCCGTGACAAAAACCATACTGTTACTCAATCATCATTTGCC
GACCCCTGTACCAAGGGCGCCTCTGGATTTGACTCTGGATTTATGCCTGTCGCAAATCCCGCCGGACCTTTCCCC
ACCTGGAAATTAACTGTCAATGATACCACACCTATCTGGGCCTATTGTCGCCAACAGGTCCCCAAGAGCCACTGT
GGGACTGGAATGGTCTTCGCCATTAATGCAGTTGAGGACGGTCCAAAGAACTTTACCGCTTTCCAAAACGTGGCC
AAGGCGTTAAGTGGGGGTGCTAGTGCAGGTAGCGCAGTTTCGGGAGACTCCAACACTGCAGACACAAACTCTGCG
CTGTCCATCCACCTCAGTCCAGTAACTGTCACTGCCATGGTATCTGTTGCTGTTGCTCTCCTTCTTTAA
Gene >AgabiH97|007740
ATGTTTGCTCTTCCTCTCTCTTTGGGCCTGGCGCTTCTGCCCTTTGCTTCTGCTGCTGTTCATGATATTCAAGTT
GGTGCTGAGGGAAAGCTACAGTTCTGGCCAGAGGCCATTGTGAGTCTTGCTAATTGGCCCCTTTGTGAAGCGCAT
CCTCATGCGTACCTATTAGGCTGCCCAACCAGGTGATCAGGTCGTCTTCCATTTTGCCTCCAAGAACCACACCGC
CACACAATCTTCCTTTGCCGATCCCTGTGGACACAGTGAAGGTGGTTTTGACTCGGGATTGTAAGTATCTACCTC
TTCGAATACCTCTTTAATTCACAATTTTTCTAGTATGCCCGTTGCCGCCAACCAGACGGACAGCCTCCCTACCTT
TGCTTTTACCGTCGAAGACGTGCGTGATGCTTCTGAAAATAACCCTTGATATTTATTCTGACTTTGCCAAAAAGA
CAAAAGCAGTCTGGGTTTACTGTAAGCAGAAAGTGCCAGTTGGTCACTGCGGGAAAGGCATGGTCTTTTCCGTCA
ACTGTCCACCCGATGGCGATCCAAATTCTTTCACAAACTTCAAGAAGTCTGCACTTGCTATTGGTGCTGCTGAGG
CTAGCGCAGCTCCCCCCGCAGCTCCCCCCGCAGCTCCCAGCGCTGACTCTGGATCAGCCCCTGCCGGATATGGTG
GGTATGGCGGTGGATATGGGGATTCCGGTGCCCCAGCCCCAAGTTCCTCGGACCCAGCTCCAGCAGCTTCAGCCT
CTGCTTCAACTTCAGCTTCAGGCGCCGTTCACACCGTCATCGTCGGCGAATCCGGATCACTTGCCTTCAACCCAC
CCAGCATCCAGGCCAAGCCCAGTGATACCGTGATCTTTGAATTGTAATCTCTTCCCCTGTTATCTCGCCCACTGA
AATTGATTCATCTTCTACTCATTCTAGCCGTGACAAAAACCATACTGTTACTCAATCATCATTTGCCGACCCCTG
TACCAAGGGCGCCTCTGGATTTGACTCTGGATTGTAAGTGCAAGTTCACTCGACTTGTCCGGCAATTTCGCTAAC
ATCTTGGTAGTATGCCTGTCGCAAATCCCGCCGGACCTTTCCCCACCTGGAAATTAACTGTCAATGATACCACAC
CTATCTGGGCCTATGTGAGCACTGACTATTGCCGTTTTCTCGTGTATCAAACTGATCATTTCCATTAGTGTCGCC
AACAGGTCCCCAAGAGCCACTGTGGGACTGGAATGGTCTTGTAAGTCATTCTCTGTTTACTTCGTACTTTACTCT
AAAACGCAATTTTAGCGCCATTAATGCAGTTGAGGACGGTCCAAAGAACTTTACCGCTTTCCAAAACGTGGCCAA
GGCGTTAAGTGGGGGTGCTAGTGCAGGTAGCGCAGTTTCGGGAGACTCCAACACTGCAGACACAAACTCTGCGCT
GTCCATCCACCTCAGTCCAGTAACTGTCACTGCCATGGTATCTGTTGCTGTTGCTCTCCTTCTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail