Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|007240
Gene name
Locationscaffold_1:1723181..1724137
Strand+
Gene length (bp)956
Transcript length (bp)798
Coding sequence length (bp)798
Protein length (aa) 266

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03330 DPBB_1 Lytic transglycolase 1.9E-07 163 256

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P86242|PAPI_STRMB Papain inhibitor OS=Streptomyces mobaraensis GN=pi PE=1 SV=2 162 265 8.0E-14
sp|D4B2H3|ALL7_ARTBC Allergen Asp f 7 homolog OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02701 PE=3 SV=1 162 265 1.0E-11
sp|O42799|ALL7_ASPFU Allergen Asp f 7 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=AFUA_4G06670 PE=1 SV=2 163 264 4.0E-08

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|007240
MSFSKLVLLFVAFVASAGALSSPHPRGIHHRALAGRITVPESPVSPPLPVRRRQNSKRCKSRPSSAALIVSTKDA
EATHTREATHTKEATPTKEVVPTKEAPTTKETEAPKPTTHETTHKASPTPKPAPPPTTKEEAPAPTKKPPPPPPT
SNLPSFLTGLNTGDATFYATGLGACGIVNKDTDFIAAASKDLFDAFPGYNGANPNKNPMCNRRVSATYEGTTIEV
VLTDRCEGCALTALDFSPAAFNKLADPGKGRLHGMTWKFI*
Coding >AgabiH97|007240
ATGTCCTTCTCAAAGCTCGTCCTTCTTTTTGTCGCTTTCGTCGCCTCTGCCGGCGCTCTCTCCAGCCCTCATCCT
CGCGGCATCCATCACCGCGCCCTCGCCGGCCGCATTACGGTTCCTGAGTCTCCAGTCTCCCCCCCTCTTCCCGTT
CGCAGGCGCCAGAACAGCAAGCGCTGCAAGTCTCGCCCTTCCTCTGCTGCCCTCATTGTAAGCACGAAGGACGCC
GAGGCTACTCACACAAGAGAGGCCACCCACACCAAAGAGGCTACCCCAACGAAAGAGGTCGTCCCCACGAAAGAG
GCTCCTACCACAAAAGAAACCGAGGCTCCTAAACCTACTACTCACGAAACGACTCACAAGGCCTCTCCTACCCCC
AAGCCGGCCCCACCACCAACGACCAAAGAAGAAGCTCCTGCCCCAACCAAGAAACCGCCTCCTCCTCCTCCCACC
TCGAACCTTCCAAGCTTCCTGACTGGTCTTAACACTGGCGATGCAACGTTTTACGCAACTGGTCTTGGTGCTTGT
GGCATCGTAAATAAAGACACTGATTTCATTGCTGCCGCCTCTAAGGACTTGTTCGATGCTTTCCCTGGCTACAAC
GGAGCCAACCCCAACAAGAACCCTATGTGTAATCGCAGGGTATCTGCGACCTATGAAGGTACCACTATCGAGGTT
GTGCTTACCGACCGGTGTGAGGGATGCGCCCTAACTGCCTTGGATTTCTCTCCGGCTGCTTTCAATAAACTTGCC
GACCCAGGTAAGGGGCGTCTGCATGGCATGACTTGGAAATTCATCTAG
Transcript >AgabiH97|007240
ATGTCCTTCTCAAAGCTCGTCCTTCTTTTTGTCGCTTTCGTCGCCTCTGCCGGCGCTCTCTCCAGCCCTCATCCT
CGCGGCATCCATCACCGCGCCCTCGCCGGCCGCATTACGGTTCCTGAGTCTCCAGTCTCCCCCCCTCTTCCCGTT
CGCAGGCGCCAGAACAGCAAGCGCTGCAAGTCTCGCCCTTCCTCTGCTGCCCTCATTGTAAGCACGAAGGACGCC
GAGGCTACTCACACAAGAGAGGCCACCCACACCAAAGAGGCTACCCCAACGAAAGAGGTCGTCCCCACGAAAGAG
GCTCCTACCACAAAAGAAACCGAGGCTCCTAAACCTACTACTCACGAAACGACTCACAAGGCCTCTCCTACCCCC
AAGCCGGCCCCACCACCAACGACCAAAGAAGAAGCTCCTGCCCCAACCAAGAAACCGCCTCCTCCTCCTCCCACC
TCGAACCTTCCAAGCTTCCTGACTGGTCTTAACACTGGCGATGCAACGTTTTACGCAACTGGTCTTGGTGCTTGT
GGCATCGTAAATAAAGACACTGATTTCATTGCTGCCGCCTCTAAGGACTTGTTCGATGCTTTCCCTGGCTACAAC
GGAGCCAACCCCAACAAGAACCCTATGTGTAATCGCAGGGTATCTGCGACCTATGAAGGTACCACTATCGAGGTT
GTGCTTACCGACCGGTGTGAGGGATGCGCCCTAACTGCCTTGGATTTCTCTCCGGCTGCTTTCAATAAACTTGCC
GACCCAGGTAAGGGGCGTCTGCATGGCATGACTTGGAAATTCATCTAG
Gene >AgabiH97|007240
ATGTCCTTCTCAAAGCTCGTCCTTCTTTTTGTCGCTTTCGTCGCCTCTGCCGGCGCTCTCTCCAGCCCTCATCCT
CGCGGCATCCATCACCGCGCCCTCGCCGGCCGCATTACGGTTCCTGAGTCTCCAGTCTCCCCCCCTCTTCCCGTT
CGCAGGCGCCAGAACAGCAAGCGCTGCAAGTCTCGCCCTTCCTCTGCTGCCCTCATTGTAAGCACGAAGGACGCC
GAGGCTACTCACACAAGAGAGGCCACCCACACCAAAGAGGCTACCCCAACGAAAGAGGTCGTCCCCACGAAAGAG
GCTCCTACCACAAAAGAAACCGAGGCTCCTAAACCTACTACTCACGAAACGACTCACAAGGCCTCTCCTACCCCC
AAGCCGGCCCCACCACCAACGACCAAAGAAGAAGCTCCTGCCCCAACCAAGAAACCGCCTCCTCCTCCTCCCACC
TCGAACCTTCCAAGCTTCCTGACTGGTCTTAACACTGGCGATGCAACGTTTTACGCAAGTAGGTTTTCATATCCG
CTTCATTTTAATCCGATTTACCTATTGTAACCTAGCTGGTCTTGGTGCTTGTGGCATCGTAAATAAAGACACTGA
TTTCATTGCTGCCGCCTCTAAGGACTTGTTCGATGCTTTCCCGTGCGTTTCCTTCTACCCTTTCTTGATTCCCCT
CATTCATTCCATGATCTGTAGTGGCTACAACGGAGCCAACCCCAACAAGAACCCTATGTGTAATCGCAGGGTATC
TGCGACCTGTGAGTATATTTTTTTGATAAGCAATATTATAGACTGCTTACGGTTCATCAGATGAAGGTACCACTA
TCGAGGTTGTGCTTACCGACCGGTGTGAGGGATGCGCCCTAACTGCCTTGGATTTCTCTCCGGCTGCTTTCAATA
AACTTGCCGACCCAGGTAAGGGGCGTCTGCATGGCATGACTTGGAAATTCATCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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