Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|006910
Gene name
Location	scaffold_1:1669481..1670686
Strand	+
Gene length (bp)	1205
Transcript length (bp)	711
Coding sequence length (bp)	711
Protein length (aa)	237

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00300	His_Phos_1	Histidine phosphatase superfamily (branch 1)	1.6E-12	6	95

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P53929\|YNK8_YEAST	Uncharacterized protein YNL108C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YNL108C PE=1 SV=1	1	124	4.0E-23
sp\|Q12415\|TFC7_YEAST	Transcription factor tau 55 kDa subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TFC7 PE=1 SV=1	1	126	8.0E-21

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 30	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|006910 MPLEKIYIARHGFRLSWFTNVWQSPTGLARDPPLAAYGEFQAKELAHYFSSLPEDEKPTAIFSSPYYRCLQTALP VAQTLGLPLLVEHGLSEFYCPIIPGTGLHPRPSSATSLKSFIAEIDPEWSSLWCSYPKSNKRMRGSIRTSCWELP LRIGCCSLTELVPKVQDSTGATQEVLGAWEAKKLADGKHLEDGAMRDWGFEDLEIEAGKVIEEPGVPGTETHIEG PSGAQTAHSML*
Coding	>AgabiH97\|006910 ATGCCGCTTGAGAAAATATACATCGCTCGTCATGGCTTCCGACTCAGTTGGTTCACCAATGTCTGGCAAAGCCCT ACTGGACTTGCGCGCGATCCACCCCTAGCAGCATACGGTGAATTTCAGGCTAAAGAACTCGCGCACTATTTTTCA AGTTTACCCGAGGATGAAAAGCCCACTGCCATCTTTTCCTCACCTTATTATCGATGTTTACAAACGGCTCTACCG GTGGCACAAACCCTAGGTCTCCCTTTACTTGTCGAACACGGTTTATCCGAATTCTATTGCCCCATTATACCAGGA ACAGGTCTCCATCCCCGTCCCAGTTCAGCCACCTCCCTCAAATCCTTCATCGCAGAGATCGATCCAGAATGGTCA TCCCTCTGGTGTTCATACCCCAAATCGAACAAACGTATGCGGGGAAGCATACGAACATCCTGTTGGGAACTCCCT TTACGAATTGGCTGTTGCTCCTTGACTGAACTGGTGCCCAAAGTTCAGGATAGCACCGGTGCTACGCAAGAGGTA CTCGGTGCTTGGGAGGCAAAGAAGCTCGCAGATGGAAAGCATTTGGAAGATGGTGCTATGAGGGATTGGGGCTTT GAAGATCTCGAAATCGAGGCTGGAAAGGTCATCGAAGAGCCCGGAGTCCCCGGTACCGAAACCCACATAGAAGGC CCCTCAGGCGCTCAAACGGCTCATAGCATGCTGTAG
Transcript	>AgabiH97\|006910 ATGCCGCTTGAGAAAATATACATCGCTCGTCATGGCTTCCGACTCAGTTGGTTCACCAATGTCTGGCAAAGCCCT ACTGGACTTGCGCGCGATCCACCCCTAGCAGCATACGGTGAATTTCAGGCTAAAGAACTCGCGCACTATTTTTCA AGTTTACCCGAGGATGAAAAGCCCACTGCCATCTTTTCCTCACCTTATTATCGATGTTTACAAACGGCTCTACCG GTGGCACAAACCCTAGGTCTCCCTTTACTTGTCGAACACGGTTTATCCGAATTCTATTGCCCCATTATACCAGGA ACAGGTCTCCATCCCCGTCCCAGTTCAGCCACCTCCCTCAAATCCTTCATCGCAGAGATCGATCCAGAATGGTCA TCCCTCTGGTGTTCATACCCCAAATCGAACAAACGTATGCGGGGAAGCATACGAACATCCTGTTGGGAACTCCCT TTACGAATTGGCTGTTGCTCCTTGACTGAACTGGTGCCCAAAGTTCAGGATAGCACCGGTGCTACGCAAGAGGTA CTCGGTGCTTGGGAGGCAAAGAAGCTCGCAGATGGAAAGCATTTGGAAGATGGTGCTATGAGGGATTGGGGCTTT GAAGATCTCGAAATCGAGGCTGGAAAGGTCATCGAAGAGCCCGGAGTCCCCGGTACCGAAACCCACATAGAAGGC CCCTCAGGCGCTCAAACGGCTCATAGCATGCTGTAG
Gene	>AgabiH97\|006910 ATGCCGCTTGAGAAAATATACATCGCTCGTCATGGCAAGGAATTTTCGATTCTCAAATTTTTTTATCGCACTCAC TCATCTATAGGCTTCCGACTCAGTTGGTTCACCAATGTCTGGCAAGTAGATCCCTGATCGGTACTCAGACTTGAC TCATAACACTACCCTTGTAGGAAGAGCCCTACTGGACTTGCGCGCGATCCACCCCTAGCAGCATACGGTGAAGTA ACTTATCAGATCTTTACGTTAGATCTTTTCCCTCCCTGACAAAGGGTTCTCCCTTTCGCATCAGTTTCAGGCTAA AGAACTCGCGCACTATTTTTCAAGTTTACCCGAGGATGAAAAGCCCACTGCCATCTTTTCCTCACCTTATTGTAA ATAAAGAAAAATTCTCACAAGAGAACGAACGATCTTCTTAAAAACTTTTTTTATAGATCGATGTTTACAAACGGC TCTACCGGTGGCACAAACCCTAGGTCTCCCTTTACTTGTCGAACACGGTTCGTCTAGCCTTTTGATCATTTTTTA AGAAAACCCTGGTTTTTGATTGACACATTTACTTAACACCGTCTGGAAATATATCAAAAGGTTTATCCGAATTCT ATTGCCCCATTATACCAGGAACAGGTCTCCATCCCCGTCCCAGTTCAGCCACCTCCCTCAAATCCTTCATCGCAG AGATCGATCCAGAATGGTCATCCCTCTGGTACCCCTCTCAAAAGGGCGAAACCGTCTCGGAGGTCCATGACCGGA CCGACGCCTTCCTCCAGGTGTTCATACCCCAAATCGAACAAACGTATGCGGGGAAGCATACGAACATCCTGTTGG TCAGCCATGCTGCTACAGTGATCGCGCTCACGAGGTCGTTAATGGGAGATAGGGAACTCCCTTTACGAATTGGCT GTTGCTCCTTGACTGAACTGGTGCCCAAAGTTCAGGATAGCACCGGTGCTACGCAAGAGGTACTCGGTGCTTGGG AGGCAAAGAAGCTCGCAGATGGAAAGCATTTGGAAGATGGTGCTATGAGGGATTGGGGCTTTGAAGATCTCGAAA TCGAGGCTGGAAAGGTTGGAAACATTTTTCAAGCCTAGAATCATGGTTAGCTGACCTTGGGATTTGGTCAGGTCA TCGAAGAGCCCGGAGTCCCCGGTACCGAAACCCACATAGAAGGCCCCTCAGGCGCTCAAACGGCTCATAGCATGC TGTAG

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