Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|006650
Gene name
Locationscaffold_1:1618949..1620251
Strand+
Gene length (bp)1302
Transcript length (bp)783
Coding sequence length (bp)783
Protein length (aa) 261

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

Domain # Start End Length
1 101 120 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|006650
MRLSSLPLLSLATVASAASKKWEATNFCKCICFQTNSTILHLDLPDNPAQPCLSCTKKWCLNQNLPICAGASLGD
TNPDTATGKEGDVEARCFQRDSPRDQLVVTLFLLTVFGLLLVAGIKNRIAKVGLTSELPWQNGRRWLEETFVPGR
QRERAAYIYCFGSTPIRCNPPQYGFALFKVEPLPGWPYCIGGNTTSGGAPTSARDPRTAAAEAAERRMQAAQQRG
TNSSNPKAGQLAAKVAQQNAKGSAEPQQPERLVWD*
Coding >AgabiH97|006650
ATGCGTCTCTCCTCCCTCCCGCTCCTCTCCCTCGCCACTGTCGCCTCCGCAGCTTCGAAAAAGTGGGAGGCCACC
AACTTCTGCAAATGCATATGTTTTCAGACAAACTCTACAATCCTTCACCTCGATCTTCCAGATAACCCTGCTCAG
CCCTGCCTGTCCTGCACAAAAAAGTGGTGTCTTAACCAGAATCTACCCATCTGCGCGGGTGCCTCGTTAGGGGAC
ACCAACCCCGACACCGCCACCGGTAAAGAGGGAGATGTAGAGGCAAGATGTTTCCAGCGCGACTCCCCCAGGGAC
CAGCTGGTGGTTACACTTTTCCTACTCACAGTCTTCGGTCTGCTGTTAGTTGCGGGAATAAAGAACCGCATCGCA
AAGGTAGGTTTGACTTCCGAACTGCCTTGGCAAAACGGGCGACGATGGTTGGAGGAAACATTCGTTCCTGGCAGA
CAAAGAGAACGTGCCGCTTATATTTACTGCTTTGGCTCTACTCCCATCCGCTGCAACCCACCACAATATGGGTTC
GCTTTGTTCAAAGTCGAGCCACTACCAGGGTGGCCATATTGTATTGGCGGAAATACTACCAGTGGAGGCGCTCCA
ACATCTGCTCGCGATCCTCGAACAGCGGCAGCGGAAGCTGCAGAACGTCGCATGCAGGCCGCCCAGCAACGGGGA
ACCAATTCATCGAATCCCAAAGCAGGGCAGCTCGCTGCCAAGGTCGCGCAACAGAATGCGAAAGGCTCCGCCGAG
CCTCAGCAGCCTGAACGTCTTGTGTGGGATTAA
Transcript >AgabiH97|006650
ATGCGTCTCTCCTCCCTCCCGCTCCTCTCCCTCGCCACTGTCGCCTCCGCAGCTTCGAAAAAGTGGGAGGCCACC
AACTTCTGCAAATGCATATGTTTTCAGACAAACTCTACAATCCTTCACCTCGATCTTCCAGATAACCCTGCTCAG
CCCTGCCTGTCCTGCACAAAAAAGTGGTGTCTTAACCAGAATCTACCCATCTGCGCGGGTGCCTCGTTAGGGGAC
ACCAACCCCGACACCGCCACCGGTAAAGAGGGAGATGTAGAGGCAAGATGTTTCCAGCGCGACTCCCCCAGGGAC
CAGCTGGTGGTTACACTTTTCCTACTCACAGTCTTCGGTCTGCTGTTAGTTGCGGGAATAAAGAACCGCATCGCA
AAGGTAGGTTTGACTTCCGAACTGCCTTGGCAAAACGGGCGACGATGGTTGGAGGAAACATTCGTTCCTGGCAGA
CAAAGAGAACGTGCCGCTTATATTTACTGCTTTGGCTCTACTCCCATCCGCTGCAACCCACCACAATATGGGTTC
GCTTTGTTCAAAGTCGAGCCACTACCAGGGTGGCCATATTGTATTGGCGGAAATACTACCAGTGGAGGCGCTCCA
ACATCTGCTCGCGATCCTCGAACAGCGGCAGCGGAAGCTGCAGAACGTCGCATGCAGGCCGCCCAGCAACGGGGA
ACCAATTCATCGAATCCCAAAGCAGGGCAGCTCGCTGCCAAGGTCGCGCAACAGAATGCGAAAGGCTCCGCCGAG
CCTCAGCAGCCTGAACGTCTTGTGTGGGATTAA
Gene >AgabiH97|006650
ATGCGTCTCTCCTCCCTCCCGCTCCTCTCCCTCGCCGTGAGTCTCTCGTCGTCGTGCTGCATCTGTCTCATGCCC
CTCCCCAGACTGTCGCCTCCGCAGCTTCGAAAAAGTGGGAGGCCACCAACTTCTGCAAATGTATTGTTGCTTCTT
GGATCTGCGATGTATTATTCAATGCTCTCCCAGGCATATGTTTTCAGACAAACTCTACAATCCTTCACCTCGATC
TTCCAGATAACCCTGCTCAGCCCTGCCTGTCCTGCACAAAAAAGTGGTGTCTTAACCAGAATCTACCCATCTGCG
CGGGTGCCTCGTTAGGGGACACCAACCCCGACACCGCCACCGGTAAAGAGGGAGATGTAGAGGCAAGATGTTTCC
GTGCGCAAATTATGGCCACGAAGATTGCATTCAGCTTCTAACGGTATACAGAGCGCGACTCCCCCAGGGACCAGC
TGGTGGTTACACTTTTCCTACTCACAGTCTTCGGTCTGCTGTTAGTTGCGGGAATAAAGAACCGCATCGCAAAGG
TAGGTTTGACTTCCGAACTGCCTTGGCAAAACGGGCGACGATGGTTGGAGGTGAGACTCTGCCGTGGATGACTGC
AGATGCTATGTGCTGAGGATATCTTAGGAAACATTCGTTCCTGGCAGACAAAGAGAACGGTTCCGCCTTGGTCAA
ATCCACCGAGATTCAGACTATGAAAGGCTGGAGAGAGAGAGAGAATCTCAGAGCGATAACGACATTCCTCTCCGT
CCATAATCTACCATGCCAGTGTATTATTTCGTGTATTGATCCCGTGTGAATATGTCGTACCCAGTGCCGCTTATA
TTTACTGCTTTGGCTCTACTCCCATCCGCTGCAACCCACCACAATATGGGTTCGCTTTGTTCAAAGTCGAGCCAC
TACCAGGGTGGCCATATTGTATTGGGTACTGGTGCAAACACTACCGGTGGGAATCCTAACAGTGGAAATACTACC
AGCGGAAATACTACCAGTGGAGGCGCTCCAACATCTGCTCGCGATCCTCGAACAGCGGCAGCGGAAGCTGCAGAA
CGTCGCATGCAGGCCGTCAGTCCTTGAGCACTTATTCTTGCTTCTTTGTTCTCGAACACTCCAGTAGGCCCAGCA
ACGGGGAACCAATTCATCGAATCCCAAAGCAGGGCAGCTCGCTGCCAAGGTCGCGCAACAGAATGCGAAAGGCTC
CGCCGAGCCTCAGCAGCCTGAACGTCTTGTGGTGAGTTCTTCTGTTACTGTCCTCCTACAGCTACTGATCTGTGA
CATGGCGCTGACACTTAGTGGGATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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