© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|006600 |
| Gene name | |
| Location | scaffold_1:1611312..1613513 |
| Strand | + |
| Gene length (bp) | 2201 |
| Transcript length (bp) | 1728 |
| Coding sequence length (bp) | 1728 |
| Protein length (aa) | 576 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02985 | HEAT | HEAT repeat | 3.0E-03 | 401 | 427 |
| PF13646 | HEAT_2 | HEAT repeats | 3.9E-11 | 363 | 464 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q38950|2AAB_ARATH | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Arabidopsis thaliana GN=PP2AA2 PE=1 SV=2 | 4 | 542 | 0.0E+00 |
| sp|P30154|2AAB_HUMAN | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Homo sapiens GN=PPP2R1B PE=1 SV=3 | 12 | 542 | 0.0E+00 |
| sp|Q9UT08|2AAA_SCHPO | Protein phosphatase PP2A regulatory subunit A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=paa1 PE=3 SV=1 | 7 | 575 | 0.0E+00 |
| sp|Q54QR9|2AAA_DICDI | Serine/threonine-protein phosphatase 2A regulatory subunit pppA OS=Dictyostelium discoideum GN=pppA PE=2 SV=1 | 12 | 574 | 0.0E+00 |
| sp|P54613|2AAB_PIG | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform (Fragment) OS=Sus scrofa GN=PPP2R1B PE=2 SV=1 | 6 | 542 | 0.0E+00 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q38950|2AAB_ARATH | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Arabidopsis thaliana GN=PP2AA2 PE=1 SV=2 | 4 | 542 | 0.0E+00 |
| sp|P30154|2AAB_HUMAN | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Homo sapiens GN=PPP2R1B PE=1 SV=3 | 12 | 542 | 0.0E+00 |
| sp|Q9UT08|2AAA_SCHPO | Protein phosphatase PP2A regulatory subunit A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=paa1 PE=3 SV=1 | 7 | 575 | 0.0E+00 |
| sp|Q54QR9|2AAA_DICDI | Serine/threonine-protein phosphatase 2A regulatory subunit pppA OS=Dictyostelium discoideum GN=pppA PE=2 SV=1 | 12 | 574 | 0.0E+00 |
| sp|P54613|2AAB_PIG | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform (Fragment) OS=Sus scrofa GN=PPP2R1B PE=2 SV=1 | 6 | 542 | 0.0E+00 |
| sp|Q4QQT4|2AAB_RAT | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Rattus norvegicus GN=Ppp2r1b PE=2 SV=1 | 6 | 542 | 0.0E+00 |
| sp|Q38951|2AAG_ARATH | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A gamma isoform OS=Arabidopsis thaliana GN=PP2AA3 PE=1 SV=2 | 4 | 542 | 0.0E+00 |
| sp|Q7TNP2|2AAB_MOUSE | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus GN=Ppp2r1b PE=1 SV=2 | 12 | 542 | 0.0E+00 |
| sp|Q32PI5|2AAA_BOVIN | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Bos taurus GN=PPP2R1A PE=1 SV=1 | 6 | 542 | 0.0E+00 |
| sp|Q76MZ3|2AAA_MOUSE | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Mus musculus GN=Ppp2r1a PE=1 SV=3 | 6 | 542 | 0.0E+00 |
| sp|P54612|2AAA_PIG | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Sus scrofa GN=PPP2R1A PE=2 SV=2 | 6 | 542 | 0.0E+00 |
| sp|Q38845|2AAA_ARATH | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Arabidopsis thaliana GN=PP2AA1 PE=1 SV=1 | 4 | 542 | 0.0E+00 |
| sp|P30153|2AAA_HUMAN | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Homo sapiens GN=PPP2R1A PE=1 SV=4 | 6 | 542 | 0.0E+00 |
| sp|P36179|2AAA_DROME | Serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit OS=Drosophila melanogaster GN=Pp2A-29B PE=2 SV=4 | 8 | 542 | 1.0E-168 |
| sp|Q09543|2AAA_CAEEL | Probable serine/threonine-protein phosphatase PP2A regulatory subunit OS=Caenorhabditis elegans GN=paa-1 PE=3 SV=2 | 12 | 553 | 8.0E-163 |
| sp|P31383|2AAA_YEAST | Protein phosphatase PP2A regulatory subunit A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPD3 PE=1 SV=3 | 8 | 544 | 1.0E-153 |
| sp|P36875|2AAA_PEA | Protein phosphatase PP2A regulatory subunit A (Fragment) OS=Pisum sativum PE=2 SV=1 | 201 | 542 | 8.0E-115 |
| sp|Q38951|2AAG_ARATH | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A gamma isoform OS=Arabidopsis thaliana GN=PP2AA3 PE=1 SV=2 | 182 | 567 | 1.0E-26 |
| sp|Q38845|2AAA_ARATH | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Arabidopsis thaliana GN=PP2AA1 PE=1 SV=1 | 89 | 562 | 3.0E-26 |
| sp|P30154|2AAB_HUMAN | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Homo sapiens GN=PPP2R1B PE=1 SV=3 | 181 | 567 | 8.0E-22 |
| sp|P54613|2AAB_PIG | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform (Fragment) OS=Sus scrofa GN=PPP2R1B PE=2 SV=1 | 181 | 567 | 1.0E-21 |
| sp|P36875|2AAA_PEA | Protein phosphatase PP2A regulatory subunit A (Fragment) OS=Pisum sativum PE=2 SV=1 | 280 | 546 | 2.0E-21 |
| sp|Q7TNP2|2AAB_MOUSE | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus GN=Ppp2r1b PE=1 SV=2 | 173 | 567 | 1.0E-19 |
| sp|Q4QQT4|2AAB_RAT | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Rattus norvegicus GN=Ppp2r1b PE=2 SV=1 | 181 | 567 | 2.0E-19 |
| sp|Q32PI5|2AAA_BOVIN | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Bos taurus GN=PPP2R1A PE=1 SV=1 | 173 | 568 | 2.0E-19 |
| sp|Q76MZ3|2AAA_MOUSE | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Mus musculus GN=Ppp2r1a PE=1 SV=3 | 173 | 568 | 2.0E-19 |
| sp|P54612|2AAA_PIG | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Sus scrofa GN=PPP2R1A PE=2 SV=2 | 173 | 568 | 2.0E-19 |
| sp|P30153|2AAA_HUMAN | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform OS=Homo sapiens GN=PPP2R1A PE=1 SV=4 | 173 | 568 | 2.0E-19 |
| sp|P36875|2AAA_PEA | Protein phosphatase PP2A regulatory subunit A (Fragment) OS=Pisum sativum PE=2 SV=1 | 85 | 417 | 2.0E-12 |
| sp|Q7TNP2|2AAB_MOUSE | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus GN=Ppp2r1b PE=1 SV=2 | 96 | 506 | 2.0E-12 |
| sp|Q09543|2AAA_CAEEL | Probable serine/threonine-protein phosphatase PP2A regulatory subunit OS=Caenorhabditis elegans GN=paa-1 PE=3 SV=2 | 105 | 417 | 5.0E-12 |
| sp|P54613|2AAB_PIG | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform (Fragment) OS=Sus scrofa GN=PPP2R1B PE=2 SV=1 | 60 | 428 | 7.0E-12 |
| sp|Q7TNP2|2AAB_MOUSE | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Mus musculus GN=Ppp2r1b PE=1 SV=2 | 60 | 428 | 6.0E-11 |
| sp|P31383|2AAA_YEAST | Protein phosphatase PP2A regulatory subunit A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPD3 PE=1 SV=3 | 35 | 417 | 4.0E-10 |
| sp|Q38950|2AAB_ARATH | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform OS=Arabidopsis thaliana GN=PP2AA2 PE=1 SV=2 | 102 | 392 | 1.0E-09 |
| sp|Q38951|2AAG_ARATH | Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A gamma isoform OS=Arabidopsis thaliana GN=PP2AA3 PE=1 SV=2 | 102 | 392 | 2.0E-09 |
| sp|Q8VI02|PP4R1_RAT | Serine/threonine-protein phosphatase 4 regulatory subunit 1 OS=Rattus norvegicus GN=Ppp4r1 PE=1 SV=1 | 278 | 541 | 5.0E-09 |
| sp|Q8K2V1|PP4R1_MOUSE | Serine/threonine-protein phosphatase 4 regulatory subunit 1 OS=Mus musculus GN=Ppp4r1 PE=1 SV=2 | 278 | 541 | 2.0E-08 |
| sp|Q8TF05|PP4R1_HUMAN | Serine/threonine-protein phosphatase 4 regulatory subunit 1 OS=Homo sapiens GN=PPP4R1 PE=1 SV=1 | 278 | 541 | 2.0E-08 |
| sp|P36875|2AAA_PEA | Protein phosphatase PP2A regulatory subunit A (Fragment) OS=Pisum sativum PE=2 SV=1 | 105 | 391 | 8.0E-08 |
| sp|Q6NUP7|PP4R4_HUMAN | Serine/threonine-protein phosphatase 4 regulatory subunit 4 OS=Homo sapiens GN=PPP4R4 PE=1 SV=1 | 273 | 449 | 1.0E-05 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0005488 | binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Casing | Casing mycelium | 246.88 | 135.72 | 358.04 |
| Initials | Initials knots | 141.90 | 82.65 | 201.14 |
| Pileal_Stipeal_center | Stage I stipe center | 125.24 | 73.65 | 176.82 |
| Pileal_Stipeal_shell | Stage I stipe shell | 126.22 | 73.96 | 178.49 |
| DIF_stipe_center | Stage II stipe center | 120.95 | 71.26 | 170.63 |
| DIF_stipe_shell | Stage II stipe shell | 130.62 | 76.64 | 184.59 |
| DIF_stipe_skin | Stage II stipe skin | 121.07 | 71.34 | 170.80 |
| DIF_cap_skin | Stage II cap skin | 133.77 | 77.80 | 189.74 |
| DIF_cap_tissue | Stage II cap tissue | 129.12 | 75.73 | 182.51 |
| DIF_gill_tissue | Stage II gill tissue | 123.64 | 72.81 | 174.46 |
| YFB_stipe_center | Young fruiting body stipe center | 147.91 | 85.87 | 209.94 |
| YFB_stipe_shell | Young fruiting body stipe shell | 159.14 | 92.00 | 226.28 |
| YFB_stipe_skin | Young fruiting body stipe skin | 127.03 | 74.53 | 179.53 |
| YFB_cap_skin | Young fruiting body cap skin | 146.13 | 84.52 | 207.74 |
| YFB_cap_tissue | Young fruiting body cap tissue | 106.56 | 63.02 | 150.11 |
| YFB_gill_tissue | Young fruiting body gill tissue | 131.86 | 77.07 | 186.64 |
| YFB_veil | Young fruiting body veil | 135.33 | 79.15 | 191.50 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Casing | DIF_gill_tissue | 0.016104 | yes |
| Casing | YFB_stipe_center | 0.091161 | no |
| Casing | YFB_stipe_shell | 0.165809 | no |
| Casing | YFB_stipe_skin | 0.019169 | yes |
| Casing | YFB_cap_skin | 0.083158 | no |
| Casing | YFB_cap_tissue | 0.002525 | yes |
| Casing | YFB_gill_tissue | 0.027698 | yes |
| Casing | YFB_veil | 0.038720 | yes |
| Casing | Initials | 0.057945 | no |
| Casing | Pileal_Stipeal_center | 0.016669 | yes |
| Casing | Pileal_Stipeal_shell | 0.018066 | yes |
| Casing | DIF_stipe_center | 0.011968 | yes |
| Casing | DIF_stipe_shell | 0.027698 | yes |
| Casing | DIF_stipe_skin | 0.013782 | yes |
| Casing | DIF_cap_skin | 0.031557 | yes |
| Casing | DIF_cap_tissue | 0.022892 | yes |
| DIF_gill_tissue | YFB_stipe_center | 0.660875 | no |
| DIF_gill_tissue | YFB_stipe_shell | 0.484539 | no |
| DIF_gill_tissue | YFB_stipe_skin | 0.962009 | no |
| DIF_gill_tissue | YFB_cap_skin | 0.686157 | no |
| DIF_gill_tissue | YFB_cap_tissue | 0.724360 | no |
| DIF_gill_tissue | YFB_gill_tissue | 0.902709 | no |
| DIF_gill_tissue | YFB_veil | 0.852290 | no |
| YFB_stipe_center | YFB_stipe_shell | 0.892176 | no |
| YFB_stipe_center | YFB_stipe_skin | 0.724598 | no |
| YFB_stipe_center | YFB_cap_skin | 0.983572 | no |
| YFB_stipe_center | YFB_cap_tissue | 0.305693 | no |
| YFB_stipe_center | YFB_gill_tissue | 0.806837 | no |
| YFB_stipe_center | YFB_veil | 0.859682 | no |
| YFB_stipe_shell | YFB_stipe_skin | 0.545703 | no |
| YFB_stipe_shell | YFB_cap_skin | 0.863331 | no |
| YFB_stipe_shell | YFB_cap_tissue | 0.181080 | no |
| YFB_stipe_shell | YFB_gill_tissue | 0.634566 | no |
| YFB_stipe_shell | YFB_veil | 0.698274 | no |
| YFB_stipe_skin | YFB_cap_skin | 0.749700 | no |
| YFB_stipe_skin | YFB_cap_tissue | 0.658176 | no |
| YFB_stipe_skin | YFB_gill_tissue | 0.945912 | no |
| YFB_stipe_skin | YFB_veil | 0.902086 | no |
| YFB_cap_skin | YFB_cap_tissue | 0.332007 | no |
| YFB_cap_skin | YFB_gill_tissue | 0.830937 | no |
| YFB_cap_skin | YFB_veil | 0.881251 | no |
| YFB_cap_tissue | YFB_gill_tissue | 0.563298 | no |
| YFB_cap_tissue | YFB_veil | 0.500239 | no |
| YFB_gill_tissue | YFB_veil | 0.963029 | no |
| Initials | DIF_gill_tissue | 0.753992 | no |
| Initials | YFB_stipe_center | 0.938259 | no |
| Initials | YFB_stipe_shell | 0.805790 | no |
| Initials | YFB_stipe_skin | 0.812469 | no |
| Initials | YFB_cap_skin | 0.959050 | no |
| Initials | YFB_cap_tissue | 0.389310 | no |
| Initials | YFB_gill_tissue | 0.884067 | no |
| Initials | YFB_veil | 0.930000 | no |
| Initials | Pileal_Stipeal_center | 0.778735 | no |
| Initials | Pileal_Stipeal_shell | 0.799192 | no |
| Initials | DIF_stipe_center | 0.698740 | no |
| Initials | DIF_stipe_shell | 0.866900 | no |
| Initials | DIF_stipe_skin | 0.703496 | no |
| Initials | DIF_cap_skin | 0.910919 | no |
| Initials | DIF_cap_tissue | 0.843944 | no |
| Pileal_Stipeal_center | DIF_gill_tissue | 0.981798 | no |
| Pileal_Stipeal_center | YFB_stipe_center | 0.692454 | no |
| Pileal_Stipeal_center | YFB_stipe_shell | 0.511248 | no |
| Pileal_Stipeal_center | YFB_stipe_skin | 0.980014 | no |
| Pileal_Stipeal_center | YFB_cap_skin | 0.718572 | no |
| Pileal_Stipeal_center | YFB_cap_tissue | 0.695563 | no |
| Pileal_Stipeal_center | YFB_gill_tissue | 0.923942 | no |
| Pileal_Stipeal_center | YFB_veil | 0.877953 | no |
| Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.988399 | no |
| Pileal_Stipeal_center | DIF_stipe_center | 0.949977 | no |
| Pileal_Stipeal_center | DIF_stipe_shell | 0.938913 | no |
| Pileal_Stipeal_center | DIF_stipe_skin | 0.950160 | no |
| Pileal_Stipeal_center | DIF_cap_skin | 0.900094 | no |
| Pileal_Stipeal_center | DIF_cap_tissue | 0.955881 | no |
| Pileal_Stipeal_shell | DIF_gill_tissue | 0.970787 | no |
| Pileal_Stipeal_shell | YFB_stipe_center | 0.704624 | no |
| Pileal_Stipeal_shell | YFB_stipe_shell | 0.529526 | no |
| Pileal_Stipeal_shell | YFB_stipe_skin | 0.990540 | no |
| Pileal_Stipeal_shell | YFB_cap_skin | 0.730947 | no |
| Pileal_Stipeal_shell | YFB_cap_tissue | 0.672568 | no |
| Pileal_Stipeal_shell | YFB_gill_tissue | 0.936497 | no |
| Pileal_Stipeal_shell | YFB_veil | 0.890970 | no |
| Pileal_Stipeal_shell | DIF_stipe_center | 0.938213 | no |
| Pileal_Stipeal_shell | DIF_stipe_shell | 0.951272 | no |
| Pileal_Stipeal_shell | DIF_stipe_skin | 0.938090 | no |
| Pileal_Stipeal_shell | DIF_cap_skin | 0.913015 | no |
| Pileal_Stipeal_shell | DIF_cap_tissue | 0.967202 | no |
| DIF_stipe_center | DIF_gill_tissue | 0.970020 | no |
| DIF_stipe_center | YFB_stipe_center | 0.611996 | no |
| DIF_stipe_center | YFB_stipe_shell | 0.435358 | no |
| DIF_stipe_center | YFB_stipe_skin | 0.928090 | no |
| DIF_stipe_center | YFB_cap_skin | 0.637388 | no |
| DIF_stipe_center | YFB_cap_tissue | 0.776366 | no |
| DIF_stipe_center | YFB_gill_tissue | 0.863102 | no |
| DIF_stipe_center | YFB_veil | 0.811310 | no |
| DIF_stipe_center | DIF_stipe_shell | 0.880257 | no |
| DIF_stipe_center | DIF_stipe_skin | 0.998164 | no |
| DIF_stipe_center | DIF_cap_skin | 0.834920 | no |
| DIF_stipe_center | DIF_cap_tissue | 0.901103 | no |
| DIF_stipe_shell | DIF_gill_tissue | 0.921324 | no |
| DIF_stipe_shell | YFB_stipe_center | 0.785249 | no |
| DIF_stipe_shell | YFB_stipe_shell | 0.616038 | no |
| DIF_stipe_shell | YFB_stipe_skin | 0.961190 | no |
| DIF_stipe_shell | YFB_cap_skin | 0.809878 | no |
| DIF_stipe_shell | YFB_cap_tissue | 0.591662 | no |
| DIF_stipe_shell | YFB_gill_tissue | 0.986057 | no |
| DIF_stipe_shell | YFB_veil | 0.950185 | no |
| DIF_stipe_shell | DIF_stipe_skin | 0.881514 | no |
| DIF_stipe_shell | DIF_cap_skin | 0.966912 | no |
| DIF_stipe_shell | DIF_cap_tissue | 0.982743 | no |
| DIF_stipe_skin | DIF_gill_tissue | 0.971478 | no |
| DIF_stipe_skin | YFB_stipe_center | 0.612396 | no |
| DIF_stipe_skin | YFB_stipe_shell | 0.432186 | no |
| DIF_stipe_skin | YFB_stipe_skin | 0.929335 | no |
| DIF_stipe_skin | YFB_cap_skin | 0.638541 | no |
| DIF_stipe_skin | YFB_cap_tissue | 0.772593 | no |
| DIF_stipe_skin | YFB_gill_tissue | 0.864132 | no |
| DIF_stipe_skin | YFB_veil | 0.811072 | no |
| DIF_stipe_skin | DIF_cap_skin | 0.835097 | no |
| DIF_stipe_skin | DIF_cap_tissue | 0.901612 | no |
| DIF_cap_skin | DIF_gill_tissue | 0.875928 | no |
| DIF_cap_skin | YFB_stipe_center | 0.831817 | no |
| DIF_cap_skin | YFB_stipe_shell | 0.666654 | no |
| DIF_cap_skin | YFB_stipe_skin | 0.921640 | no |
| DIF_cap_skin | YFB_cap_skin | 0.855129 | no |
| DIF_cap_skin | YFB_cap_tissue | 0.524695 | no |
| DIF_cap_skin | YFB_gill_tissue | 0.979678 | no |
| DIF_cap_skin | YFB_veil | 0.983659 | no |
| DIF_cap_skin | DIF_cap_tissue | 0.948000 | no |
| DIF_cap_tissue | DIF_gill_tissue | 0.937121 | no |
| DIF_cap_tissue | YFB_stipe_center | 0.759631 | no |
| DIF_cap_tissue | YFB_stipe_shell | 0.586702 | no |
| DIF_cap_tissue | YFB_stipe_skin | 0.976915 | no |
| DIF_cap_tissue | YFB_cap_skin | 0.785448 | no |
| DIF_cap_tissue | YFB_cap_tissue | 0.621228 | no |
| DIF_cap_tissue | YFB_gill_tissue | 0.969852 | no |
| DIF_cap_tissue | YFB_veil | 0.931121 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|006600 MDPSMGIEQIAPIAMLMDELRSEDVQLRLNAIHSLPTIALALGADRARDELMSFLQDSIDDEDEVLLALAEELGK SFEEYVGGKEYAHVLLGPLENLSAVEETLVRDKAAESITKVAEVLAQSQVEQYYIPLLKRLSGGEWFTSRTSAAA LYAPVYSKVSSGIQDELRKAYAALGADDTPMVRRAAAKSFGPLLKQYSQQHIISEGLQVYRRLQADDQDSVRLLT VEDLIAIAQKLSPTEVKDLLLKQTKQSIGDKSWRVRYMAASHFNELAEAVGTELVREELLGQYIQLLKDNEAEVR TAAATQIPGFSKLLDKEVILARIIPCVRDLSQDTSQHVRAALANQIHGLAPLLNREPTIEHLLPLFLHLLKDDFS EVRLNIISKLETVNNVIGIELLSESLLPAIMELAEDKSWRVRQAIIQYIPLLATQFGKPFFDEELGNLCMSWLGD SVYSIREAAIVNLKKLIEVFGVEWARAAIVPKVVGMGSHPSFLFRMTTVQAITTISPSLTLEILRADIINPLLEL SKDHIPNIRFNVAKCLEVMAASFNSTPGGRQFVQELILPAKLSQQIRKDR* |
| Coding | >AgabiH97|006600 ATGGATCCATCGATGGGCATAGAACAGATTGCGCCGATCGCCATGCTCATGGATGAGTTACGTTCGGAAGACGTT CAGCTTCGTCTGAACGCAATTCATAGTCTACCCACGATAGCACTGGCGTTAGGTGCAGATCGCGCGCGGGATGAA TTGATGTCTTTTCTTCAAGATTCTATTGATGATGAAGATGAAGTTCTTCTTGCTCTTGCGGAAGAGTTAGGTAAA AGCTTTGAGGAATACGTAGGGGGTAAAGAGTATGCCCATGTTCTTCTTGGCCCGCTAGAGAATCTCTCTGCGGTG GAAGAAACACTCGTTCGGGATAAGGCCGCCGAATCAATAACGAAAGTAGCGGAAGTGTTAGCTCAAAGCCAAGTA GAGCAATACTATATCCCACTTTTGAAACGACTCTCTGGTGGCGAGTGGTTCACGTCACGGACTTCTGCTGCTGCA CTCTACGCACCGGTTTACTCTAAAGTTTCCTCTGGCATTCAAGATGAATTGCGCAAAGCATATGCAGCTCTTGGG GCAGACGATACACCCATGGTTCGCAGAGCCGCTGCAAAATCTTTCGGGCCCCTCCTTAAACAGTATTCCCAGCAG CATATCATCTCCGAAGGCTTGCAAGTTTATAGGCGGTTGCAAGCTGACGATCAGGACTCCGTCCGACTGCTGACT GTCGAGGATCTCATTGCCATCGCGCAGAAACTCTCCCCGACTGAAGTTAAGGATCTCTTGCTGAAGCAGACTAAG CAAAGTATCGGTGACAAGAGCTGGCGAGTGCGATACATGGCTGCAAGCCATTTCAATGAGCTTGCGGAGGCTGTT GGGACAGAGTTGGTGCGAGAAGAGCTGCTCGGTCAGTACATCCAGCTTCTGAAAGATAATGAAGCAGAGGTACGA ACAGCTGCGGCCACACAAATACCGGGCTTCTCCAAGCTACTCGACAAAGAAGTCATCTTGGCCAGAATCATTCCC TGTGTTAGAGACTTGTCACAAGACACGTCTCAGCATGTTCGTGCGGCCCTAGCGAACCAGATTCATGGTCTCGCG CCTTTGTTGAACCGAGAGCCAACTATCGAACATCTTCTTCCGCTTTTTTTGCATCTCTTGAAAGATGATTTCTCT GAAGTACGATTGAATATCATCAGTAAACTCGAAACAGTCAATAATGTAATTGGTATTGAGCTTCTTTCTGAAAGC TTGCTTCCGGCTATCATGGAGCTAGCTGAAGACAAATCGTGGCGAGTGCGACAGGCGATTATTCAGTACATTCCC CTCCTTGCTACTCAATTCGGTAAACCCTTTTTTGATGAAGAACTGGGCAACCTGTGTATGTCATGGTTGGGAGAT TCGGTTTACAGCATCCGGGAAGCTGCGATCGTCAATCTCAAAAAACTGATTGAAGTCTTCGGCGTTGAGTGGGCT CGAGCAGCTATTGTACCAAAGGTGGTTGGAATGGGGTCTCATCCGAGCTTCCTCTTCAGGATGACGACTGTTCAG GCAATCACAACGATTTCACCTTCTTTGACGCTTGAGATCTTGCGAGCGGACATAATCAATCCACTTCTGGAATTA TCGAAGGATCACATTCCTAATATTCGTTTCAACGTAGCGAAATGCCTGGAAGTGATGGCAGCATCTTTTAACTCT ACGCCCGGGGGCCGTCAATTCGTCCAGGAATTGATCCTCCCTGCAAAGCTCTCCCAGCAGATTCGTAAAGACAGG TAG |
| Transcript | >AgabiH97|006600 ATGGATCCATCGATGGGCATAGAACAGATTGCGCCGATCGCCATGCTCATGGATGAGTTACGTTCGGAAGACGTT CAGCTTCGTCTGAACGCAATTCATAGTCTACCCACGATAGCACTGGCGTTAGGTGCAGATCGCGCGCGGGATGAA TTGATGTCTTTTCTTCAAGATTCTATTGATGATGAAGATGAAGTTCTTCTTGCTCTTGCGGAAGAGTTAGGTAAA AGCTTTGAGGAATACGTAGGGGGTAAAGAGTATGCCCATGTTCTTCTTGGCCCGCTAGAGAATCTCTCTGCGGTG GAAGAAACACTCGTTCGGGATAAGGCCGCCGAATCAATAACGAAAGTAGCGGAAGTGTTAGCTCAAAGCCAAGTA GAGCAATACTATATCCCACTTTTGAAACGACTCTCTGGTGGCGAGTGGTTCACGTCACGGACTTCTGCTGCTGCA CTCTACGCACCGGTTTACTCTAAAGTTTCCTCTGGCATTCAAGATGAATTGCGCAAAGCATATGCAGCTCTTGGG GCAGACGATACACCCATGGTTCGCAGAGCCGCTGCAAAATCTTTCGGGCCCCTCCTTAAACAGTATTCCCAGCAG CATATCATCTCCGAAGGCTTGCAAGTTTATAGGCGGTTGCAAGCTGACGATCAGGACTCCGTCCGACTGCTGACT GTCGAGGATCTCATTGCCATCGCGCAGAAACTCTCCCCGACTGAAGTTAAGGATCTCTTGCTGAAGCAGACTAAG CAAAGTATCGGTGACAAGAGCTGGCGAGTGCGATACATGGCTGCAAGCCATTTCAATGAGCTTGCGGAGGCTGTT GGGACAGAGTTGGTGCGAGAAGAGCTGCTCGGTCAGTACATCCAGCTTCTGAAAGATAATGAAGCAGAGGTACGA ACAGCTGCGGCCACACAAATACCGGGCTTCTCCAAGCTACTCGACAAAGAAGTCATCTTGGCCAGAATCATTCCC TGTGTTAGAGACTTGTCACAAGACACGTCTCAGCATGTTCGTGCGGCCCTAGCGAACCAGATTCATGGTCTCGCG CCTTTGTTGAACCGAGAGCCAACTATCGAACATCTTCTTCCGCTTTTTTTGCATCTCTTGAAAGATGATTTCTCT GAAGTACGATTGAATATCATCAGTAAACTCGAAACAGTCAATAATGTAATTGGTATTGAGCTTCTTTCTGAAAGC TTGCTTCCGGCTATCATGGAGCTAGCTGAAGACAAATCGTGGCGAGTGCGACAGGCGATTATTCAGTACATTCCC CTCCTTGCTACTCAATTCGGTAAACCCTTTTTTGATGAAGAACTGGGCAACCTGTGTATGTCATGGTTGGGAGAT TCGGTTTACAGCATCCGGGAAGCTGCGATCGTCAATCTCAAAAAACTGATTGAAGTCTTCGGCGTTGAGTGGGCT CGAGCAGCTATTGTACCAAAGGTGGTTGGAATGGGGTCTCATCCGAGCTTCCTCTTCAGGATGACGACTGTTCAG GCAATCACAACGATTTCACCTTCTTTGACGCTTGAGATCTTGCGAGCGGACATAATCAATCCACTTCTGGAATTA TCGAAGGATCACATTCCTAATATTCGTTTCAACGTAGCGAAATGCCTGGAAGTGATGGCAGCATCTTTTAACTCT ACGCCCGGGGGCCGTCAATTCGTCCAGGAATTGATCCTCCCTGCAAAGCTCTCCCAGCAGATTCGTAAAGACAGG TAG |
| Gene | >AgabiH97|006600 ATGGATCCATCGATGGGCATAGAACAGGTGTGCTTTCGACCACCCGCGAGATCTCTCGAATTCAACTCACGGCCT ATCTAAGATTGCGCCGATCGCCATGCTCATGGATGAGTTACGTTCGGAAGACGTTCAGCTTCGTCTGAACGCAAT TCATAGTCTACCCACGATAGCACTGGCGTTAGGTGCAGATCGCGCGCGGGATGAATTGATGTCTTTTCTTCAAGA TTCTATTGATGATGAAGATGAAGTTCTTCTTGCTCTTGCGGAAGAGTTAGGTAAAAGCTTTGAGGAATACGTAGG GGGTAAAGAGTATGCCCATGTTCTTCTTGGCCCGCTAGAGAATCTCTCTGCGGTGGAAGAAACACTCGTTCGGGA TAAGGTACGCGGTTTCTTTGCATCTATCATGCATTATATTCAAGCCGTGACAGGCCGCCGAATCAATAACGAAAG TAGCGGAAGTGTTAGCTCAAAGCCAAGTAGAGCAATACTATATCCCACTTTTGAAACGACTCTCTGGTGGCGAGT GGTTCACGTCACGGACTTCTGCTGCTGCACTCTACGCACCGGTTTACTCTAAAGTTTCCTCTGGCATTCAAGATG AATTGCGCAAAGCATATGCAGCTCTTGGGGCAGACGATACACCCATGGTTCGCAGAGCCGCTGCAAAATCTTTCG GGGTCAGCAGTCGTTCACTGGATCGAGTTTCCAAGCTGACAGGCACTGTAGCCCCTCCTTAAACAGTATTCCCAG CAGCATATCATCTCCGAAGGCTTGCAAGTTTATAGGCGGTTGCAAGCTGACGATCAGGACTCCGTCCGACTGCTG ACTGTCGAGGATCTCATTGCCATCGCGCAGAAACTCTCCCCGACTGAAGTTAAGGATCTCTTGCTGAAGCAGACT AAGCAAAGTATCGGTGACAAGAGCTGGCGAGTGCGATACATGGCTGCAAGCCATTTCAATGAGGCAAGTTTTTTT TACTGATCCTATAAATGCCTCATATTCAATACATTTCAAAGCTTGCGGAGGCTGTTGGGACAGAGTTGGTGCGAG AAGAGCTGCTCGGTCAGTACATCCAGCTTCTGAAAGATAATGAAGCAGAGGTACGAACAGCTGCGGCCACACAAA TACCGGGTGAGTTTAGCTGAGGAAAATGATCACATAACTTAACCAAAAGAGTTATAGGCTTCTCCAAGCTACTCG ACAAAGAAGTCATCTTGGCCAGAATCATTCCCTGTGTTAGAGACTTGTCACAAGACACGTCTCAGCATGTTCGTG CGGCCCTAGCGAACCAGATTCATGGTCTCGCGCCTTTGTTGAACCGAGAGCCAACTATCGAACATCTTCTTCCGC TTTTTTTGCATCTCTTGAAAGATGATTTCTCTGAAGTACGATTGAATATCATCAGTAAACTCGAAACAGTCAATA ATGGTATGCCTTGCCGCTCATTTTCGGGTTGGACATCAATGTACTAATCACCCACAGTAATTGGTATTGAGCTTC TTTCTGAAAGCTTGCTTCCGGCTATCATGGAGCTAGCTGAAGACAAATCGTGGCGAGTGCGACAGGCGATTATTC AGTACATTCCCCTCCTTGCTACTCAATTCGGTAAACCCTTTTTTGATGAAGAACTGGGCAACCTGTGTATGTCAT GGTTGGGAGATTCGGTTTACAGCATCCGGGAAGCTGCGATCGTCAATCTCAAAAAACTGATTGAAGTCTTCGGCG TTGAGTGGGCTCGAGCAGCTATTGTACCAAAGGTGGTTGGAATGGGGTCTCATCCGAGCTTCCTCTTCAGGATGA CGACTGTTCAGGCAATCACAGTATGTTAGTTCATCATCTCTTCTGATTCAGACTTAGTTCTTGCCCAGACGATTT CACCTTCTTTGACGCTTGAGATCTTGCGAGCGGACATAATCAATCCACTTCTGGAATTATCGAAGGATCACATTC CTAATATTCGTTTCAACGTAGCGAAATGCCTGGAAGTGATGGCAGCATCTTTTAACTCTACGCCCGGGGGCCGTC AATTCGTCCAGGAATTGATCCTCCCTGCGTTAGAACGACAGAAAGATGATGTTGATGCCGATGTCCGGTACTTTG CCTCCCGCGCACTACAGAAAGCTCTCCCAGCAGATTCGTAAAGGTATGATACCACAACAATCACGATACTACGTA TATTCAGTCGAAATTTAGACAGGTAG |