Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|006400
Gene name
Locationscaffold_1:1549268..1551654
Strand+
Gene length (bp)2386
Transcript length (bp)2082
Coding sequence length (bp)2082
Protein length (aa) 694

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05026 DCP2 Dcp2, box A domain 2.8E-30 30 112
PF00293 NUDIX NUDIX domain 3.5E-13 117 228

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O13828|DCP2_SCHPO mRNA decapping complex subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dcp2 PE=1 SV=1 21 251 2.0E-92
sp|Q8GW31|DCP2_ARATH mRNA-decapping enzyme subunit 2 OS=Arabidopsis thaliana GN=DCP2 PE=1 SV=1 29 324 2.0E-66
sp|Q9CYC6|DCP2_MOUSE m7GpppN-mRNA hydrolase OS=Mus musculus GN=Dcp2 PE=1 SV=2 31 251 4.0E-58
sp|Q8IU60|DCP2_HUMAN m7GpppN-mRNA hydrolase OS=Homo sapiens GN=DCP2 PE=1 SV=2 31 251 1.0E-57
sp|Q5REQ8|DCP2_PONAB m7GpppN-mRNA hydrolase OS=Pongo abelii GN=DCP2 PE=2 SV=1 31 251 7.0E-57
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Swissprot ID Swissprot Description Start End E-value
sp|O13828|DCP2_SCHPO mRNA decapping complex subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dcp2 PE=1 SV=1 21 251 2.0E-92
sp|Q8GW31|DCP2_ARATH mRNA-decapping enzyme subunit 2 OS=Arabidopsis thaliana GN=DCP2 PE=1 SV=1 29 324 2.0E-66
sp|Q9CYC6|DCP2_MOUSE m7GpppN-mRNA hydrolase OS=Mus musculus GN=Dcp2 PE=1 SV=2 31 251 4.0E-58
sp|Q8IU60|DCP2_HUMAN m7GpppN-mRNA hydrolase OS=Homo sapiens GN=DCP2 PE=1 SV=2 31 251 1.0E-57
sp|Q5REQ8|DCP2_PONAB m7GpppN-mRNA hydrolase OS=Pongo abelii GN=DCP2 PE=2 SV=1 31 251 7.0E-57
sp|Q75BK1|DCP2_ASHGO mRNA-decapping enzyme subunit 2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DCP2 PE=3 SV=1 26 256 2.0E-51
sp|A6ZRW5|DCP2_YEAS7 mRNA-decapping enzyme subunit 2 OS=Saccharomyces cerevisiae (strain YJM789) GN=DCP2 PE=3 SV=1 26 251 9.0E-50
sp|P53550|DCP2_YEAST mRNA-decapping enzyme subunit 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DCP2 PE=1 SV=1 26 251 1.0E-49
sp|O62255|DCP2_CAEEL mRNA-decapping enzyme 2 OS=Caenorhabditis elegans GN=dcap-2 PE=2 SV=4 30 261 7.0E-43
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GO

GO Term Description Terminal node
GO:0003723 RNA binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No
GO:0097159 organic cyclic compound binding No
GO:1901363 heterocyclic compound binding No
GO:0003676 nucleic acid binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 33 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|006400
MASSSPEFVPSANSTEPQPRFSYKDASHEEVLEDLSSRFILNLPDEELASLERICFQVEQAHWFYEDFIREQNPV
FPSLPLKKFSAMLFHACPLLHQWSNDHENAFNLFMQYKTRVPVCGAIMLNSTWDKCVLVKGWKSSSGWGFPKGKI
NEDEPKHTCAIREVLEETGYNLAGKLKPEDVIELSIKEQRISLFIVPGVEEDFPFETKTRKEISRIEWFQLSDLP
TWKRNKQVPGKFYLISPFIGPLKAFINLHKHRPPRKGGRHKKGQKQAQVGTHCSDTDPILESDSQTSDNQTEKNA
NKSRTPPLADGVLESENIDPHFARLLSSLTLSASSNLVAPTNEIQSAMDPATPVPSAVHRSLDPEPLLDSSAHTI
LQPPPHQSIASPSSSSQRDLSSTPVATPQRTQPISSHHSHNLRNDVLYSPSTTQAPDDSAVARSPYAHRPRTDIS
PYLTKATVDTTSTRRLQQLALLEKVADESARMVPQSSAGGPVSIPVSPMSIPPTASVDPDFTRGVYYHTPSSSLG
SRPDSSNHESLDYLDSNPHTKARQAFHRGFPQSQDSQGNLSMDHSQLLALMNNAAPVAPHPHSFQQPFGFPSGHF
QPHSPLYGPTSFPSISNIPNNSPYVVPMSARSMASAGLPVSNPNRFASATPAVDSFSLRMAPTNTAHTLLSILNG
RPTLPGNPAGPASVNQPI*
Coding >AgabiH97|006400
ATGGCTTCGTCGTCACCCGAATTCGTCCCGTCTGCCAATTCTACTGAACCGCAACCCCGCTTCTCTTACAAGGAT
GCCTCGCACGAAGAGGTTTTGGAGGACCTGTCAAGTCGATTTATTCTCAACCTTCCAGATGAAGAGTTAGCTTCT
CTTGAACGTATCTGTTTTCAAGTGGAGCAGGCACATTGGTTTTATGAAGATTTCATTCGCGAACAAAATCCAGTG
TTCCCTTCGCTGCCGCTCAAGAAGTTTTCTGCCATGCTTTTCCATGCTTGCCCTCTTCTCCACCAGTGGAGCAAT
GATCACGAAAATGCTTTCAATCTCTTCATGCAGTACAAGACTCGTGTACCTGTATGCGGAGCCATCATGCTGAAT
AGTACTTGGGATAAATGCGTGCTAGTGAAGGGCTGGAAATCATCCTCTGGGTGGGGTTTTCCTAAGGGGAAAATT
AATGAAGACGAACCAAAGCATACTTGTGCTATTCGAGAGGTTCTAGAAGAGACAGGATACAATCTTGCTGGAAAG
TTGAAACCCGAAGATGTCATTGAGTTGTCTATAAAAGAGCAAAGAATATCTTTATTTATTGTGCCAGGAGTGGAG
GAAGATTTTCCTTTCGAAACGAAGACCCGTAAAGAAATCAGCCGTATAGAGTGGTTCCAACTCTCCGATCTGCCG
ACATGGAAGCGAAACAAACAAGTGCCTGGAAAATTCTATCTAATTTCTCCGTTCATCGGCCCTCTCAAAGCATTC
ATAAATTTACATAAACACCGACCGCCACGAAAGGGTGGCCGGCACAAAAAAGGCCAAAAACAGGCTCAAGTCGGC
ACTCATTGTTCAGACACCGATCCTATACTCGAGTCGGATTCACAGACTTCAGATAACCAGACAGAGAAAAATGCA
AACAAGTCCCGAACTCCGCCTTTGGCAGATGGTGTTCTCGAATCCGAGAATATTGACCCCCATTTCGCTCGTCTT
TTAAGTTCACTGACACTTTCAGCTTCTAGCAATCTTGTGGCCCCGACCAATGAAATCCAATCCGCAATGGATCCC
GCCACGCCTGTTCCTAGTGCAGTGCATCGCAGCCTTGACCCTGAACCACTCTTGGACTCAAGCGCTCATACTATC
CTGCAACCACCACCGCACCAATCGATTGCCTCACCTTCAAGCAGTTCTCAGCGTGATCTATCTTCTACGCCCGTA
GCTACACCACAACGAACTCAGCCCATCAGTTCTCACCATAGCCACAATCTCCGCAATGACGTGTTGTATTCACCG
TCCACAACACAAGCACCTGATGATTCGGCAGTAGCTAGAAGTCCGTACGCACACCGTCCTAGGACGGATATATCG
CCATACTTGACAAAGGCCACCGTTGACACGACATCAACACGACGACTGCAACAGCTTGCTCTACTGGAGAAAGTT
GCGGATGAGTCGGCGAGAATGGTTCCCCAATCTTCGGCGGGTGGTCCAGTTTCAATCCCTGTGTCACCCATGTCT
ATACCCCCAACGGCATCTGTGGATCCAGATTTTACTCGCGGGGTGTACTATCACACTCCGTCGTCGTCGCTAGGG
TCCCGGCCGGATTCTTCTAATCATGAAAGTTTGGATTATTTGGATTCTAATCCTCATACAAAAGCTAGGCAGGCT
TTTCATCGAGGATTTCCCCAATCCCAGGATAGTCAGGGTAACCTTAGCATGGACCACAGTCAACTGTTAGCCTTG
ATGAATAACGCAGCGCCAGTGGCTCCGCACCCACACTCTTTTCAACAACCTTTCGGCTTTCCTTCAGGGCACTTT
CAACCTCATTCGCCGTTATACGGTCCCACGTCTTTCCCCTCAATTTCCAATATCCCGAATAATTCACCATACGTG
GTACCTATGAGTGCTAGAAGCATGGCTTCAGCAGGCCTCCCTGTTTCTAATCCAAATCGGTTTGCATCAGCCACA
CCAGCAGTCGACAGTTTTTCGTTGAGGATGGCGCCAACTAATACTGCCCACACGCTCCTCTCTATCCTCAACGGG
AGGCCTACATTGCCGGGCAATCCAGCCGGGCCTGCATCAGTCAACCAACCGATATGA
Transcript >AgabiH97|006400
ATGGCTTCGTCGTCACCCGAATTCGTCCCGTCTGCCAATTCTACTGAACCGCAACCCCGCTTCTCTTACAAGGAT
GCCTCGCACGAAGAGGTTTTGGAGGACCTGTCAAGTCGATTTATTCTCAACCTTCCAGATGAAGAGTTAGCTTCT
CTTGAACGTATCTGTTTTCAAGTGGAGCAGGCACATTGGTTTTATGAAGATTTCATTCGCGAACAAAATCCAGTG
TTCCCTTCGCTGCCGCTCAAGAAGTTTTCTGCCATGCTTTTCCATGCTTGCCCTCTTCTCCACCAGTGGAGCAAT
GATCACGAAAATGCTTTCAATCTCTTCATGCAGTACAAGACTCGTGTACCTGTATGCGGAGCCATCATGCTGAAT
AGTACTTGGGATAAATGCGTGCTAGTGAAGGGCTGGAAATCATCCTCTGGGTGGGGTTTTCCTAAGGGGAAAATT
AATGAAGACGAACCAAAGCATACTTGTGCTATTCGAGAGGTTCTAGAAGAGACAGGATACAATCTTGCTGGAAAG
TTGAAACCCGAAGATGTCATTGAGTTGTCTATAAAAGAGCAAAGAATATCTTTATTTATTGTGCCAGGAGTGGAG
GAAGATTTTCCTTTCGAAACGAAGACCCGTAAAGAAATCAGCCGTATAGAGTGGTTCCAACTCTCCGATCTGCCG
ACATGGAAGCGAAACAAACAAGTGCCTGGAAAATTCTATCTAATTTCTCCGTTCATCGGCCCTCTCAAAGCATTC
ATAAATTTACATAAACACCGACCGCCACGAAAGGGTGGCCGGCACAAAAAAGGCCAAAAACAGGCTCAAGTCGGC
ACTCATTGTTCAGACACCGATCCTATACTCGAGTCGGATTCACAGACTTCAGATAACCAGACAGAGAAAAATGCA
AACAAGTCCCGAACTCCGCCTTTGGCAGATGGTGTTCTCGAATCCGAGAATATTGACCCCCATTTCGCTCGTCTT
TTAAGTTCACTGACACTTTCAGCTTCTAGCAATCTTGTGGCCCCGACCAATGAAATCCAATCCGCAATGGATCCC
GCCACGCCTGTTCCTAGTGCAGTGCATCGCAGCCTTGACCCTGAACCACTCTTGGACTCAAGCGCTCATACTATC
CTGCAACCACCACCGCACCAATCGATTGCCTCACCTTCAAGCAGTTCTCAGCGTGATCTATCTTCTACGCCCGTA
GCTACACCACAACGAACTCAGCCCATCAGTTCTCACCATAGCCACAATCTCCGCAATGACGTGTTGTATTCACCG
TCCACAACACAAGCACCTGATGATTCGGCAGTAGCTAGAAGTCCGTACGCACACCGTCCTAGGACGGATATATCG
CCATACTTGACAAAGGCCACCGTTGACACGACATCAACACGACGACTGCAACAGCTTGCTCTACTGGAGAAAGTT
GCGGATGAGTCGGCGAGAATGGTTCCCCAATCTTCGGCGGGTGGTCCAGTTTCAATCCCTGTGTCACCCATGTCT
ATACCCCCAACGGCATCTGTGGATCCAGATTTTACTCGCGGGGTGTACTATCACACTCCGTCGTCGTCGCTAGGG
TCCCGGCCGGATTCTTCTAATCATGAAAGTTTGGATTATTTGGATTCTAATCCTCATACAAAAGCTAGGCAGGCT
TTTCATCGAGGATTTCCCCAATCCCAGGATAGTCAGGGTAACCTTAGCATGGACCACAGTCAACTGTTAGCCTTG
ATGAATAACGCAGCGCCAGTGGCTCCGCACCCACACTCTTTTCAACAACCTTTCGGCTTTCCTTCAGGGCACTTT
CAACCTCATTCGCCGTTATACGGTCCCACGTCTTTCCCCTCAATTTCCAATATCCCGAATAATTCACCATACGTG
GTACCTATGAGTGCTAGAAGCATGGCTTCAGCAGGCCTCCCTGTTTCTAATCCAAATCGGTTTGCATCAGCCACA
CCAGCAGTCGACAGTTTTTCGTTGAGGATGGCGCCAACTAATACTGCCCACACGCTCCTCTCTATCCTCAACGGG
AGGCCTACATTGCCGGGCAATCCAGCCGGGCCTGCATCAGTCAACCAACCGATATGA
Gene >AgabiH97|006400
ATGGCTTCGTCGTCACCCGAATTCGTCCCGTCTGCCAATTCTACTGAACCGCAACCCCGCTTCTCTTACAAGGAT
GCCTCGCACGAAGAGGTTTTGGAGGACCTGTCAAGGTATTTGTTTCCAAAGAAGAAGCCTCAAACTTGCATAACG
TTGTTTGCAGTCGATTTATTCTCAACCTTCCAGATGAAGAGTTAGCTTCTCTTGAACGTATCTGTTTTCAAGTGG
AGCAGGCGTCCGTTTTTCCAGCCACCAGAAACTTCCATCGCCCTGACCCGTTTTTGCTTTCAGACATTGGTTTTA
TGAAGATTTCATTCGCGAACAAAATCCAGTGTTCCCTTCGCTGCCGCTCAAGAAGTTTTCTGCCATGCTTTTCCA
TGCTTGCCCTCTTCTCCACCAGTGGAGCAATGATCACGAAAATGCTTTCAATCTCTTCATGCAGTACAAGACTCG
TGTACCTGTATGCGGAGCCATCATGCTGAATAGTACTTGGGATAAAGTGAGTAGTCTAATGCTCCCTAGTGGCAA
CAATCTCAGTGGCTTTGATGTAGTGCGTGCTAGTGAAGGGCTGGAAATCATCCTCTGGGTGGGGTTTTCCTAAGG
GGAAAATTAATGAAGACGAACCAAAGCATACTTGTGCTATTCGAGAGGTATGTTTTGATGCACAACTTCGCCACG
TCGTTGCTGAATAATCACCGTAGGTTCTAGAAGAGACAGGATACAATCTTGCTGGAAAGTTGAAACCCGAAGATG
TCATTGAGTTGTCTATAAAAGAGCAAAGAATATCTTTATTTATTGTGCCAGGAGTGGAGGAAGATTTTCCTTTCG
AAACGAAGACCCGTAAAGAAATCAGCGTAAGTAATGTTTTGCTAAACTAGGGACATAAATTCATCCTCGACCAGC
GTATAGAGTGGTTCCAACTCTCCGATCTGCCGACATGGAAGCGAAACAAACAAGTGCCTGGAAAATTCTATCTAA
TTTCTCCGTTCATCGGGTGAGCATTATTAACCTATTTTTTGCCTGAGTCTGATTATTTCTCAGCCCTCTCAAAGC
ATTCATAAATTTACATAAACACCGACCGCCACGAAAGGGTGGCCGGCACAAAAAAGGCCAAAAACAGGCTCAAGT
CGGCACTCATTGTTCAGACACCGATCCTATACTCGAGTCGGATTCACAGACTTCAGATAACCAGACAGAGAAAAA
TGCAAACAAGTCCCGAACTCCGCCTTTGGCAGATGGTGTTCTCGAATCCGAGAATATTGACCCCCATTTCGCTCG
TCTTTTAAGTTCACTGACACTTTCAGCTTCTAGCAATCTTGTGGCCCCGACCAATGAAATCCAATCCGCAATGGA
TCCCGCCACGCCTGTTCCTAGTGCAGTGCATCGCAGCCTTGACCCTGAACCACTCTTGGACTCAAGCGCTCATAC
TATCCTGCAACCACCACCGCACCAATCGATTGCCTCACCTTCAAGCAGTTCTCAGCGTGATCTATCTTCTACGCC
CGTAGCTACACCACAACGAACTCAGCCCATCAGTTCTCACCATAGCCACAATCTCCGCAATGACGTGTTGTATTC
ACCGTCCACAACACAAGCACCTGATGATTCGGCAGTAGCTAGAAGTCCGTACGCACACCGTCCTAGGACGGATAT
ATCGCCATACTTGACAAAGGCCACCGTTGACACGACATCAACACGACGACTGCAACAGCTTGCTCTACTGGAGAA
AGTTGCGGATGAGTCGGCGAGAATGGTTCCCCAATCTTCGGCGGGTGGTCCAGTTTCAATCCCTGTGTCACCCAT
GTCTATACCCCCAACGGCATCTGTGGATCCAGATTTTACTCGCGGGGTGTACTATCACACTCCGTCGTCGTCGCT
AGGGTCCCGGCCGGATTCTTCTAATCATGAAAGTTTGGATTATTTGGATTCTAATCCTCATACAAAAGCTAGGCA
GGCTTTTCATCGAGGATTTCCCCAATCCCAGGATAGTCAGGGTAACCTTAGCATGGACCACAGTCAACTGTTAGC
CTTGATGAATAACGCAGCGCCAGTGGCTCCGCACCCACACTCTTTTCAACAACCTTTCGGCTTTCCTTCAGGGCA
CTTTCAACCTCATTCGCCGTTATACGGTCCCACGTCTTTCCCCTCAATTTCCAATATCCCGAATAATTCACCATA
CGTGGTACCTATGAGTGCTAGAAGCATGGCTTCAGCAGGCCTCCCTGTTTCTAATCCAAATCGGTTTGCATCAGC
CACACCAGCAGTCGACAGTTTTTCGTTGAGGATGGCGCCAACTAATACTGCCCACACGCTCCTCTCTATCCTCAA
CGGGAGGCCTACATTGCCGGGCAATCCAGCCGGGCCTGCATCAGTCAACCAACCGATATGA

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